Click here to switch to the map view.

The map label for this gene is 17230953

Identifier: 17230953

GI number: 17230953

Start: 4172078

End: 4172446

Strand: Reverse

Name: 17230953

Synonym: all3461

Alternate gene names: NA

Gene position: 4172446-4172078 (Counterclockwise)

Preceding gene: 17230954

Following gene: 17230951

Centisome position: 65.05

GC content: 48.24

Gene sequence:

>369_bases
ATGGAGCCAGATTCTTTACCAACCGAGGTGATTCTGACGCATCCACGTCGCTCCCTCGGTAAAGTCCAACTTGACTGGAC
ACCCCAACCCGGAAACTATCTCGATTTTGAAGGCAACACCTACGCAGTTCTAGAACGCCGCCATAGATATCAACTTAAAT
CGGGGCGTTATCGTTTGCATAATATAGCTCTTTACGTCCAGTCTGCCCAAAGACCATCAGAAAAAACTTTAGTAGCAGGG
CGTTGGGTAGTAGGTGATGCCACCTGTAGATTTAATGCCCACTCAGAAATCATTCGCTGTGCAGTCAATCCCCACGGCCC
TTGCGAGTCCTGCCGTTATTATGAAACCTCACTAGCTGCCATTTCCTAA

Upstream 100 bases:

>100_bases
TCAATAATAGAGTGAGTTATTAATTATAGTCGAAGTCGGATCAGCAAAGGTAGGCTGCTGCGATACTATTTTTATAATGT
AAACCACATCACATAAACTT

Downstream 100 bases:

>100_bases
CACTTCCCCCACCGTCAGCCGCGTACCATTAACAAAATCCCAGCCCGACTGGGGGCGTTTGCCAGGTAGCTGAACCTCTC
GTAAAAGTAAAAGTCCTTCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 122; Mature: 122

Protein sequence:

>122_residues
MEPDSLPTEVILTHPRRSLGKVQLDWTPQPGNYLDFEGNTYAVLERRHRYQLKSGRYRLHNIALYVQSAQRPSEKTLVAG
RWVVGDATCRFNAHSEIIRCAVNPHGPCESCRYYETSLAAIS

Sequences:

>Translated_122_residues
MEPDSLPTEVILTHPRRSLGKVQLDWTPQPGNYLDFEGNTYAVLERRHRYQLKSGRYRLHNIALYVQSAQRPSEKTLVAG
RWVVGDATCRFNAHSEIIRCAVNPHGPCESCRYYETSLAAIS
>Mature_122_residues
MEPDSLPTEVILTHPRRSLGKVQLDWTPQPGNYLDFEGNTYAVLERRHRYQLKSGRYRLHNIALYVQSAQRPSEKTLVAG
RWVVGDATCRFNAHSEIIRCAVNPHGPCESCRYYETSLAAIS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13931; Mature: 13931

Theoretical pI: Translated: 8.62; Mature: 8.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.3 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
3.3 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEPDSLPTEVILTHPRRSLGKVQLDWTPQPGNYLDFEGNTYAVLERRHRYQLKSGRYRLH
CCCCCCCCEEEEECCCCCCCEEEEEEECCCCCEEEECCCEEEEEEHHHHEECCCCCEEEE
NIALYVQSAQRPSEKTLVAGRWVVGDATCRFNAHSEIIRCAVNPHGPCESCRYYETSLAA
EEEEEEECCCCCCCCEEEECEEEEECCEEEECCCCEEEEEECCCCCCCCCCEEEECEEEE
IS
CC
>Mature Secondary Structure
MEPDSLPTEVILTHPRRSLGKVQLDWTPQPGNYLDFEGNTYAVLERRHRYQLKSGRYRLH
CCCCCCCCEEEEECCCCCCCEEEEEEECCCCCEEEECCCEEEEEEHHHHEECCCCCEEEE
NIALYVQSAQRPSEKTLVAGRWVVGDATCRFNAHSEIIRCAVNPHGPCESCRYYETSLAA
EEEEEEECCCCCCCCEEEECEEEEECCEEEECCCCEEEEEECCCCCCCCCCEEEECEEEE
IS
CC

PDB accession: NA

Resolution: NA

Structure class: Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA