| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is 17230267
Identifier: 17230267
GI number: 17230267
Start: 3372236
End: 3372985
Strand: Direct
Name: 17230267
Synonym: alr2775
Alternate gene names: NA
Gene position: 3372236-3372985 (Clockwise)
Preceding gene: 17230266
Following gene: 17230272
Centisome position: 52.58
GC content: 35.6
Gene sequence:
>750_bases GTGAGATGTTTTATGTCACTCCCAGTAAAAATAAACTTATCTGAAGGTTTATTACAACATTGGCAAACAGCAAAGGGTTA TGTTGACCAAAGGGTTAACTCTTTAACTGACTCAGCACAAAAACTTGGGCAATCTTTACAAGAAACGACTAATACAACCA CTGATAAAACTATTGATGCCGTTACAAAAACTCTGGGACAAAGCTGGCAAACGGCAGAACAAATTAAGAGTACAACATCT GTGGCGCTAAAAACAGCCATAGATGCTTCTGTAAATGATTGGCTAGTACAACACCCTACATTTTGGCGATTAGTGCAGAT ATTAGTTTGGGCAACTAATCACCCAATTATTAGTTTAATCATACTACTATTTACCATAGCTCTCATTTGGAGCATTATCA AAGCAATAATGCGCTTGATTGAGACAGCTAGCGCGTCAATTTTGCAAGTACCATTAAAATTTATTCAGGCTTTAATTCAA TTTGTGATTTTATCTTTAACTAAAGTTGGCAGCTTCGCTATACAAAAAATCAGCAATCATCACATAATAGACGATGCAAA AGCTTTGTCAATGACGAAAACTGAAGTGTTTCATCAAGATAAACAGCAAAGATTAATAGATATTTCCCATCGCCTGGAAG AAATTCAACAGGAACAGCAACAGCTTTTACAAGAAGCTCAAGAGCTAATTGCTTCAGATACCATTGAGGTAAAACATCCG GAAATAAAATTAACTCCCAGTCAATATTAA
Upstream 100 bases:
>100_bases GTCGCTATCATTGGGAAATCTTGCCCAATCAAAGTTTAGATTCGGTGCTAGTCCCTACTAACCAACCTCAAGATGGGTTG CGAGTTCGATTCCAACCTCT
Downstream 100 bases:
>100_bases AACATCAGAAAATTGGGGAATGATATCATCTTCTGTGCCAGATAAAAATTGAGCAAAGCGCTGTGCTAATGGTGGTATCA AAACTAAAGGATTGCTGAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 249; Mature: 249
Protein sequence:
>249_residues MRCFMSLPVKINLSEGLLQHWQTAKGYVDQRVNSLTDSAQKLGQSLQETTNTTTDKTIDAVTKTLGQSWQTAEQIKSTTS VALKTAIDASVNDWLVQHPTFWRLVQILVWATNHPIISLIILLFTIALIWSIIKAIMRLIETASASILQVPLKFIQALIQ FVILSLTKVGSFAIQKISNHHIIDDAKALSMTKTEVFHQDKQQRLIDISHRLEEIQQEQQQLLQEAQELIASDTIEVKHP EIKLTPSQY
Sequences:
>Translated_249_residues MRCFMSLPVKINLSEGLLQHWQTAKGYVDQRVNSLTDSAQKLGQSLQETTNTTTDKTIDAVTKTLGQSWQTAEQIKSTTS VALKTAIDASVNDWLVQHPTFWRLVQILVWATNHPIISLIILLFTIALIWSIIKAIMRLIETASASILQVPLKFIQALIQ FVILSLTKVGSFAIQKISNHHIIDDAKALSMTKTEVFHQDKQQRLIDISHRLEEIQQEQQQLLQEAQELIASDTIEVKHP EIKLTPSQY >Mature_249_residues MRCFMSLPVKINLSEGLLQHWQTAKGYVDQRVNSLTDSAQKLGQSLQETTNTTTDKTIDAVTKTLGQSWQTAEQIKSTTS VALKTAIDASVNDWLVQHPTFWRLVQILVWATNHPIISLIILLFTIALIWSIIKAIMRLIETASASILQVPLKFIQALIQ FVILSLTKVGSFAIQKISNHHIIDDAKALSMTKTEVFHQDKQQRLIDISHRLEEIQQEQQQLLQEAQELIASDTIEVKHP EIKLTPSQY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28202; Mature: 28202
Theoretical pI: Translated: 7.30; Mature: 7.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRCFMSLPVKINLSEGLLQHWQTAKGYVDQRVNSLTDSAQKLGQSLQETTNTTTDKTIDA CCCEEECCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH VTKTLGQSWQTAEQIKSTTSVALKTAIDASVNDWLVQHPTFWRLVQILVWATNHPIISLI HHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHHCCCHHHHHH ILLFTIALIWSIIKAIMRLIETASASILQVPLKFIQALIQFVILSLTKVGSFAIQKISNH HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC HIIDDAKALSMTKTEVFHQDKQQRLIDISHRLEEIQQEQQQLLQEAQELIASDTIEVKHP CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECC EIKLTPSQY EEECCCCCC >Mature Secondary Structure MRCFMSLPVKINLSEGLLQHWQTAKGYVDQRVNSLTDSAQKLGQSLQETTNTTTDKTIDA CCCEEECCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH VTKTLGQSWQTAEQIKSTTSVALKTAIDASVNDWLVQHPTFWRLVQILVWATNHPIISLI HHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHHCCCHHHHHH ILLFTIALIWSIIKAIMRLIETASASILQVPLKFIQALIQFVILSLTKVGSFAIQKISNH HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC HIIDDAKALSMTKTEVFHQDKQQRLIDISHRLEEIQQEQQQLLQEAQELIASDTIEVKHP CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECC EIKLTPSQY EEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA