| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is dctB [H]
Identifier: 17230231
GI number: 17230231
Start: 3336138
End: 3337913
Strand: Direct
Name: dctB [H]
Synonym: alr2739
Alternate gene names: 17230231
Gene position: 3336138-3337913 (Clockwise)
Preceding gene: 17230230
Following gene: 17230233
Centisome position: 52.02
GC content: 36.26
Gene sequence:
>1776_bases ATGAAAATCTCCACCAAGTTTCTCACAGGTTCTACTATATCTGTCGGACTCATAGTGGCTATTCTTATCGGCAATACTGT AGTTGTGCAGCAAATTAGGCAGAATGTCCGCGAAAAAAGTTATCAAACTACTCAAACTATAAAGGCCGTTTTAGAAACAA ATAATACTTTAAAGTCGGAAATAATTGCCCTCAAAGATATTGTTTTATTCAAAACTAAAAGCACACGTACAGAAATACTG CACGCCGAGTTCCTTGATTCCTTAAATCAAGTAGAACAGTTAATGCCAAATTCACCCGAAATTGCTTTAATTCGTCGGCG GCATCAATTGCTTGACAATATGGCAGTACAATTAACTCAACGTAGTTCTAGTCCAACATATCTAGAAGATTCTCAGCAGT ATTTTAGAGCAATTAATTCTTTTAATCAAGATATTCAGTTATTTCTAGAACAGATAATTCAACGTGCTTATCAAGAGCGA ATTTTATTAGAGCAAGACTTAGAAAACCTCTACCAAGTACAGAGAATCATCTCTATAGTGGTTGTAGCCGTAATTTTAAT GCTATTGATTGGGAAATTTATACTCATTTGGCAACCAACAATCAAATCTATACAAAATTTACAGTTAGGTACGGCAGAAA TTGCAGCAGGTAATTTTGATTATCGCTTAAACATCCACACAGGTGATGAAATTGAAGACTTAGCTCAAGCATTCAATGAT ATGGCAGTTAAGTTATCCCAATCGCGGGAAACCTTGATGAAAAATACTGAGTTAACTAACATGAATCAGCGTTTGGAATT AGAAATTGCCGAACGCAAACAAGCTGAATTAGAATTGCAAAAAGCTTTACAGGAACTACAGCAAACTCAAGCCCAACTGA TTCAAACTGAGAAAATGTCTAGCTTAGGTCAGCTAGTAGCTGGAGTAGCTCATGAAATTAATAATCCAGTTAGTTTTATC TATGGCAATATTACTCATGCCAAGGAATATACAGAAAAACTTTTAGAATTAATCCATCTCTATCAACAAGAGTTAACCGA GCCGAGTGCAGTAATTCAAGAAAAAATTGCAGAAATAGACCTAGAATTTTTACAAGAAGACCTTCCCAAAATCCTCAGTT CAATGAAAATGGGGTCTCAGCGAATTCAACAGATTGTTTTATCTTTACGCAATTTTTCTCGCCTGGATGAAGCAGAGATG AAAGAGGTAGATATTCATGAAGGCATTGAAAGTACTCTGCTGATTCTACAAAATCGATTTAAGGCTAAATCGCAATCTTA TAATATTGAAATTATTAAGGAATATGGACAATTACCTTTAGTAGAGTGCCATGCAGGACAGTTAAATCAGGTATTTATGA ATATTATTAATAATGCCGTTGATGCTTTAGAAGGGTCAGTGGTCAGTGGTCAGTGGTCAATTGTAAATGGCAAAACAACT AATAATGAACGACTGACAAATAACAGCCCCCAAATTTCAATTCGTACTGAAATAAATAATAATAACCGGGTGGTAATTAG AATCGCTGATAACGGCCCAGGTATTAATCAACTGGTGATGCAAAAGCTGTTTGACCCGTTTTTCACAACCAAGCCTGTTG GTCAAGGTACGGGGTTGGGTTTATCCATTAGTTACCAAATTGTGGTTGACAAACATTCTGGAGTGCTACGATGTGAGTCT GAAATAGGCAAAGGAACAGAGTTTTGGATTGAAATTCCTTTACGTCAGGTGCAACCGGAGAAACCAGAACACGGTTTCAG TACAATGGAAGTTTAA
Upstream 100 bases:
>100_bases TAGGAGCTGAATCAGCCGGCTATACTCTTGTCGGCCCAGACCACTACGCTCCTATTCAACAACTCCGTCAAGAACTCAAC TTAACATCCATCCCGAAAAA
Downstream 100 bases:
>100_bases AATTTTCTCTCCAAGGATAATTGATTCATAATTATTGAGTGCGGTTAATACTACAGTCTTTAGATTTTAAAAACTGCTCT CGGATGAAGAAATTCCTAGA
Product: two-component sensor histidine kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 591; Mature: 591
Protein sequence:
>591_residues MKISTKFLTGSTISVGLIVAILIGNTVVVQQIRQNVREKSYQTTQTIKAVLETNNTLKSEIIALKDIVLFKTKSTRTEIL HAEFLDSLNQVEQLMPNSPEIALIRRRHQLLDNMAVQLTQRSSSPTYLEDSQQYFRAINSFNQDIQLFLEQIIQRAYQER ILLEQDLENLYQVQRIISIVVVAVILMLLIGKFILIWQPTIKSIQNLQLGTAEIAAGNFDYRLNIHTGDEIEDLAQAFND MAVKLSQSRETLMKNTELTNMNQRLELEIAERKQAELELQKALQELQQTQAQLIQTEKMSSLGQLVAGVAHEINNPVSFI YGNITHAKEYTEKLLELIHLYQQELTEPSAVIQEKIAEIDLEFLQEDLPKILSSMKMGSQRIQQIVLSLRNFSRLDEAEM KEVDIHEGIESTLLILQNRFKAKSQSYNIEIIKEYGQLPLVECHAGQLNQVFMNIINNAVDALEGSVVSGQWSIVNGKTT NNERLTNNSPQISIRTEINNNNRVVIRIADNGPGINQLVMQKLFDPFFTTKPVGQGTGLGLSISYQIVVDKHSGVLRCES EIGKGTEFWIEIPLRQVQPEKPEHGFSTMEV
Sequences:
>Translated_591_residues MKISTKFLTGSTISVGLIVAILIGNTVVVQQIRQNVREKSYQTTQTIKAVLETNNTLKSEIIALKDIVLFKTKSTRTEIL HAEFLDSLNQVEQLMPNSPEIALIRRRHQLLDNMAVQLTQRSSSPTYLEDSQQYFRAINSFNQDIQLFLEQIIQRAYQER ILLEQDLENLYQVQRIISIVVVAVILMLLIGKFILIWQPTIKSIQNLQLGTAEIAAGNFDYRLNIHTGDEIEDLAQAFND MAVKLSQSRETLMKNTELTNMNQRLELEIAERKQAELELQKALQELQQTQAQLIQTEKMSSLGQLVAGVAHEINNPVSFI YGNITHAKEYTEKLLELIHLYQQELTEPSAVIQEKIAEIDLEFLQEDLPKILSSMKMGSQRIQQIVLSLRNFSRLDEAEM KEVDIHEGIESTLLILQNRFKAKSQSYNIEIIKEYGQLPLVECHAGQLNQVFMNIINNAVDALEGSVVSGQWSIVNGKTT NNERLTNNSPQISIRTEINNNNRVVIRIADNGPGINQLVMQKLFDPFFTTKPVGQGTGLGLSISYQIVVDKHSGVLRCES EIGKGTEFWIEIPLRQVQPEKPEHGFSTMEV >Mature_591_residues MKISTKFLTGSTISVGLIVAILIGNTVVVQQIRQNVREKSYQTTQTIKAVLETNNTLKSEIIALKDIVLFKTKSTRTEIL HAEFLDSLNQVEQLMPNSPEIALIRRRHQLLDNMAVQLTQRSSSPTYLEDSQQYFRAINSFNQDIQLFLEQIIQRAYQER ILLEQDLENLYQVQRIISIVVVAVILMLLIGKFILIWQPTIKSIQNLQLGTAEIAAGNFDYRLNIHTGDEIEDLAQAFND MAVKLSQSRETLMKNTELTNMNQRLELEIAERKQAELELQKALQELQQTQAQLIQTEKMSSLGQLVAGVAHEINNPVSFI YGNITHAKEYTEKLLELIHLYQQELTEPSAVIQEKIAEIDLEFLQEDLPKILSSMKMGSQRIQQIVLSLRNFSRLDEAEM KEVDIHEGIESTLLILQNRFKAKSQSYNIEIIKEYGQLPLVECHAGQLNQVFMNIINNAVDALEGSVVSGQWSIVNGKTT NNERLTNNSPQISIRTEINNNNRVVIRIADNGPGINQLVMQKLFDPFFTTKPVGQGTGLGLSISYQIVVDKHSGVLRCES EIGKGTEFWIEIPLRQVQPEKPEHGFSTMEV
Specific function: Member of the two-component regulatory system dctB/dctD involved in the transport of C4-dicarboxylates. DctB functions as a membrane-associated protein kinase that phosphorylates dctD in response to environmental signals [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 histidine kinase domain [H]
Homologues:
Organism=Escherichia coli, GI1788549, Length=289, Percent_Identity=29.757785467128, Blast_Score=103, Evalue=3e-23, Organism=Escherichia coli, GI1790436, Length=304, Percent_Identity=25.9868421052632, Blast_Score=85, Evalue=1e-17, Organism=Escherichia coli, GI1790300, Length=360, Percent_Identity=25.5555555555556, Blast_Score=69, Evalue=1e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR017055 - InterPro: IPR009082 [H]
Pfam domain/function: PF02518 HATPase_c; PF00512 HisKA [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 67108; Mature: 67108
Theoretical pI: Translated: 5.13; Mature: 5.13
Prosite motif: PS50885 HAMP ; PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKISTKFLTGSTISVGLIVAILIGNTVVVQQIRQNVREKSYQTTQTIKAVLETNNTLKSE CCCCCEEECCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH IIALKDIVLFKTKSTRTEILHAEFLDSLNQVEQLMPNSPEIALIRRRHQLLDNMAVQLTQ HHHHHHHHEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH RSSSPTYLEDSQQYFRAINSFNQDIQLFLEQIIQRAYQERILLEQDLENLYQVQRIISIV CCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VVAVILMLLIGKFILIWQPTIKSIQNLQLGTAEIAAGNFDYRLNIHTGDEIEDLAQAFND HHHHHHHHHHHHHHEEECHHHHHHHHCCCCCHHEECCCEEEEEEECCCCCHHHHHHHHHH MAVKLSQSRETLMKNTELTNMNQRLELEIAERKQAELELQKALQELQQTQAQLIQTEKMS HHHHHHHHHHHHHHCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SLGQLVAGVAHEINNPVSFIYGNITHAKEYTEKLLELIHLYQQELTEPSAVIQEKIAEID HHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH LEFLQEDLPKILSSMKMGSQRIQQIVLSLRNFSRLDEAEMKEVDIHEGIESTLLILQNRF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCHHHHHHHHHHHH KAKSQSYNIEIIKEYGQLPLVECHAGQLNQVFMNIINNAVDALEGSVVSGQWSIVNGKTT HCCCCCCCHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHHHHCCCEECCEEEEECCCCC NNERLTNNSPQISIRTEINNNNRVVIRIADNGPGINQLVMQKLFDPFFTTKPVGQGTGLG CCCCCCCCCCCEEEEEEECCCCEEEEEECCCCCCHHHHHHHHHHCHHHCCCCCCCCCCCC LSISYQIVVDKHSGVLRCESEIGKGTEFWIEIPLRQVQPEKPEHGFSTMEV EEEEEEEEEECCCCCEEEHHHCCCCCEEEEECCHHHCCCCCCCCCCCCCCC >Mature Secondary Structure MKISTKFLTGSTISVGLIVAILIGNTVVVQQIRQNVREKSYQTTQTIKAVLETNNTLKSE CCCCCEEECCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH IIALKDIVLFKTKSTRTEILHAEFLDSLNQVEQLMPNSPEIALIRRRHQLLDNMAVQLTQ HHHHHHHHEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH RSSSPTYLEDSQQYFRAINSFNQDIQLFLEQIIQRAYQERILLEQDLENLYQVQRIISIV CCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VVAVILMLLIGKFILIWQPTIKSIQNLQLGTAEIAAGNFDYRLNIHTGDEIEDLAQAFND HHHHHHHHHHHHHHEEECHHHHHHHHCCCCCHHEECCCEEEEEEECCCCCHHHHHHHHHH MAVKLSQSRETLMKNTELTNMNQRLELEIAERKQAELELQKALQELQQTQAQLIQTEKMS HHHHHHHHHHHHHHCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SLGQLVAGVAHEINNPVSFIYGNITHAKEYTEKLLELIHLYQQELTEPSAVIQEKIAEID HHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH LEFLQEDLPKILSSMKMGSQRIQQIVLSLRNFSRLDEAEMKEVDIHEGIESTLLILQNRF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCHHHHHHHHHHHH KAKSQSYNIEIIKEYGQLPLVECHAGQLNQVFMNIINNAVDALEGSVVSGQWSIVNGKTT HCCCCCCCHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHHHHCCCEECCEEEEECCCCC NNERLTNNSPQISIRTEINNNNRVVIRIADNGPGINQLVMQKLFDPFFTTKPVGQGTGLG CCCCCCCCCCCEEEEEEECCCCEEEEEECCCCCCHHHHHHHHHHCHHHCCCCCCCCCCCC LSISYQIVVDKHSGVLRCESEIGKGTEFWIEIPLRQVQPEKPEHGFSTMEV EEEEEEEEEECCCCCEEEHHHCCCCCEEEEECCHHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 3671068 [H]