| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is 17228839
Identifier: 17228839
GI number: 17228839
Start: 1596398
End: 1596610
Strand: Direct
Name: 17228839
Synonym: asr1344
Alternate gene names: NA
Gene position: 1596398-1596610 (Clockwise)
Preceding gene: 17228838
Following gene: 17228841
Centisome position: 24.89
GC content: 44.6
Gene sequence:
>213_bases ATGTCTGATCCAATTACCTTACAAGTAAATGGGGAAACCCACAATTGCTCATCTCCAACTCCCTTACCTGACTTACTCCA ACAACTAGGTTTTAATCCCCGATTAGTGGCGGTAGAGTATAACGGGGAGATTTTACATCGCCAGTTCTGGGAACAGACTC AAGTACAATCAGGCGATCGCCTAGAGGTAGTTACAATTGTTGGTGGTGGCTAA
Upstream 100 bases:
>100_bases ATCAACTGACAATTTAAAGTTTATCAAGACATCTGGCAGCCAATTGGTAAAAGATGTCTAATTTTTGTGTATCTTAATTA CGACTTACGAAATTATTCTC
Downstream 100 bases:
>100_bases TTGTGAATGTAGCTCCTAGCTTCTAACCTCTTGCCCAAGGTATAACGAACGATGTAAGGTTTTGCGCTTGGCTAATTCTT TACCCTGATGACCAAGTTGT
Product: hypothetical protein
Products: NA
Alternate protein names: Sulfur Transfer Protein Involved In Thiamine Biosynthesis; Thiamine-Biosynthesis Protein ThiamineS; Thiamine Biosynthesis Protein
Number of amino acids: Translated: 70; Mature: 69
Protein sequence:
>70_residues MSDPITLQVNGETHNCSSPTPLPDLLQQLGFNPRLVAVEYNGEILHRQFWEQTQVQSGDRLEVVTIVGGG
Sequences:
>Translated_70_residues MSDPITLQVNGETHNCSSPTPLPDLLQQLGFNPRLVAVEYNGEILHRQFWEQTQVQSGDRLEVVTIVGGG >Mature_69_residues SDPITLQVNGETHNCSSPTPLPDLLQQLGFNPRLVAVEYNGEILHRQFWEQTQVQSGDRLEVVTIVGGG
Specific function: Unknown
COG id: COG2104
COG function: function code H; Sulfur transfer protein involved in thiamine biosynthesis
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7732; Mature: 7601
Theoretical pI: Translated: 4.29; Mature: 4.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDPITLQVNGETHNCSSPTPLPDLLQQLGFNPRLVAVEYNGEILHRQFWEQTQVQSGDR CCCCEEEEECCCCCCCCCCCCHHHHHHHCCCCCEEEEEEECCCEEHHHHHHHHHCCCCCC LEVVTIVGGG EEEEEEEECC >Mature Secondary Structure SDPITLQVNGETHNCSSPTPLPDLLQQLGFNPRLVAVEYNGEILHRQFWEQTQVQSGDR CCCEEEEECCCCCCCCCCCCHHHHHHHCCCCCEEEEEEECCCEEHHHHHHHHHCCCCCC LEVVTIVGGG EEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA