Definition Nostoc sp. PCC 7120, complete genome.
Accession NC_003272
Length 6,413,771

Click here to switch to the map view.

The map label for this gene is 17228830

Identifier: 17228830

GI number: 17228830

Start: 1585377

End: 1585544

Strand: Direct

Name: 17228830

Synonym: asr1335

Alternate gene names: NA

Gene position: 1585377-1585544 (Clockwise)

Preceding gene: 17228829

Following gene: 17228831

Centisome position: 24.72

GC content: 34.52

Gene sequence:

>168_bases
GTGCATTCTCCGCAGGTGAATGAAAATAAATGTAAGTTTGTAGTCAGTGCTTTAGTCCTAGTTAATATTATTCTGGGTAA
TGAATTGCTATCTACGAACTATAATTTTATTCGCACTAGCTTACTCACCTTACAAATGTATCTTCACAAACTAGCCAGTA
ACGAGTAA

Upstream 100 bases:

>100_bases
TCGCTCCTTAGGAGAACGAAAATAAACAAAATATAAACACACTTGACAAACTTAATTATTTAATTCTAATATTATTATAG
AAATAGATATCTGTTAACTC

Downstream 100 bases:

>100_bases
CAGATTAACTCTATAAATTCATCTGTATCTGCCGTTTAAGTATTTCTACAGATGAAAATCTTTAATATTCATTTGTCTAG
ATATTGCTTTTCAATTCGAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 55; Mature: 55

Protein sequence:

>55_residues
MHSPQVNENKCKFVVSALVLVNIILGNELLSTNYNFIRTSLLTLQMYLHKLASNE

Sequences:

>Translated_55_residues
MHSPQVNENKCKFVVSALVLVNIILGNELLSTNYNFIRTSLLTLQMYLHKLASNE
>Mature_55_residues
MHSPQVNENKCKFVVSALVLVNIILGNELLSTNYNFIRTSLLTLQMYLHKLASNE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 6263; Mature: 6263

Theoretical pI: Translated: 8.51; Mature: 8.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHSPQVNENKCKFVVSALVLVNIILGNELLSTNYNFIRTSLLTLQMYLHKLASNE
CCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHCCHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MHSPQVNENKCKFVVSALVLVNIILGNELLSTNYNFIRTSLLTLQMYLHKLASNE
CCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHCCHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA