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The map label for this gene is potI [H]

Identifier: 17228829

GI number: 17228829

Start: 1584750

End: 1585301

Strand: Direct

Name: potI [H]

Synonym: alr1334

Alternate gene names: 17228829

Gene position: 1584750-1585301 (Clockwise)

Preceding gene: 17228828

Following gene: 17228830

Centisome position: 24.71

GC content: 41.67

Gene sequence:

>552_bases
GTGTTGGGAACCTTAATGGCTGTGGGTTTGGCGCGTTATCAGTTTCCTGGCAAGAATTTGTATCGTGGTGTTGCTTACCT
ACCATTAATTATTCCCGATATTGCGATCGCTGTTGCCACTCTCGTCTTTCTCGCTACCTTCGCCATCCCCCTCAGCTTAT
GGACGATTGTAGCTGCTCATGTGGTGTTTTGTATTGCTTATATTGCTTTAGTAGTTTCGTCTCGATTGACAAATTTAGAC
CCCCACTTAGAAGAAGCAGCACTTGATTTAGGCGCTACACCAATACAAGCATTTCTCCAAGTATTACTACCTCAATTAAT
GCCAGGAATTGTTGCTGGCTGTTTGTTAGCATTTGTCCTCAGTCTAGATGATTTTCTCATTGCTAGTTTTACCTCAGGTA
GCGGTTACAACACCCTGCCAATGGAAATTTTTAGTCGGATTAGAAGTGGTGTTAAACCTGATATTAATGCTCTCAGTGTT
TTGCTGATTTTTCTATCGGCAATTGTTGCCTTTATAGCAGAATCAATTCGCTCCTTAGGAGAACGAAAATAA

Upstream 100 bases:

>100_bases
CACCCTGGATTGGTATTACCAGCTATTAGGTGACGATCGCATCTTATCAGCTTTGAAAAATAGTTTACTGGTTGCCTGCT
GTGCCGTTAGCATTGCCGCC

Downstream 100 bases:

>100_bases
ACAAAATATAAACACACTTGACAAACTTAATTATTTAATTCTAATATTATTATAGAAATAGATATCTGTTAACTCGTGCA
TTCTCCGCAGGTGAATGAAA

Product: permease protein of ABC transporter

Products: ADP; phosphate; putrescine [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 183; Mature: 183

Protein sequence:

>183_residues
MLGTLMAVGLARYQFPGKNLYRGVAYLPLIIPDIAIAVATLVFLATFAIPLSLWTIVAAHVVFCIAYIALVVSSRLTNLD
PHLEEAALDLGATPIQAFLQVLLPQLMPGIVAGCLLAFVLSLDDFLIASFTSGSGYNTLPMEIFSRIRSGVKPDINALSV
LLIFLSAIVAFIAESIRSLGERK

Sequences:

>Translated_183_residues
MLGTLMAVGLARYQFPGKNLYRGVAYLPLIIPDIAIAVATLVFLATFAIPLSLWTIVAAHVVFCIAYIALVVSSRLTNLD
PHLEEAALDLGATPIQAFLQVLLPQLMPGIVAGCLLAFVLSLDDFLIASFTSGSGYNTLPMEIFSRIRSGVKPDINALSV
LLIFLSAIVAFIAESIRSLGERK
>Mature_183_residues
MLGTLMAVGLARYQFPGKNLYRGVAYLPLIIPDIAIAVATLVFLATFAIPLSLWTIVAAHVVFCIAYIALVVSSRLTNLD
PHLEEAALDLGATPIQAFLQVLLPQLMPGIVAGCLLAFVLSLDDFLIASFTSGSGYNTLPMEIFSRIRSGVKPDINALSV
LLIFLSAIVAFIAESIRSLGERK

Specific function: Required for the activity of the bacterial periplasmic transport system of putrescine [H]

COG id: COG1177

COG function: function code E; ABC-type spermidine/putrescine transport system, permease component II

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787081, Length=190, Percent_Identity=46.3157894736842, Blast_Score=154, Evalue=3e-39,
Organism=Escherichia coli, GI1787368, Length=176, Percent_Identity=36.9318181818182, Blast_Score=140, Evalue=4e-35,
Organism=Escherichia coli, GI1788764, Length=175, Percent_Identity=34.8571428571429, Blast_Score=76, Evalue=1e-15,
Organism=Escherichia coli, GI1787714, Length=169, Percent_Identity=33.7278106508876, Blast_Score=73, Evalue=1e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 19634; Mature: 19634

Theoretical pI: Translated: 6.50; Mature: 6.50

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLGTLMAVGLARYQFPGKNLYRGVAYLPLIIPDIAIAVATLVFLATFAIPLSLWTIVAAH
CHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VVFCIAYIALVVSSRLTNLDPHLEEAALDLGATPIQAFLQVLLPQLMPGIVAGCLLAFVL
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SLDDFLIASFTSGSGYNTLPMEIFSRIRSGVKPDINALSVLLIFLSAIVAFIAESIRSLG
HHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC
ERK
CCC
>Mature Secondary Structure
MLGTLMAVGLARYQFPGKNLYRGVAYLPLIIPDIAIAVATLVFLATFAIPLSLWTIVAAH
CHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VVFCIAYIALVVSSRLTNLDPHLEEAALDLGATPIQAFLQVLLPQLMPGIVAGCLLAFVL
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SLDDFLIASFTSGSGYNTLPMEIFSRIRSGVKPDINALSVLLIFLSAIVAFIAESIRSLG
HHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC
ERK
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; putrescine [Periplasm]; H2O [C]

Specific reaction: ATP + putrescine [Periplasm] + H2O = ADP + phosphate + putrescine [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]