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The map label for this gene is 17228827

Identifier: 17228827

GI number: 17228827

Start: 1583116

End: 1583766

Strand: Direct

Name: 17228827

Synonym: alr1332

Alternate gene names: NA

Gene position: 1583116-1583766 (Clockwise)

Preceding gene: 17228826

Following gene: 17228828

Centisome position: 24.68

GC content: 40.86

Gene sequence:

>651_bases
ATGGGAAAACATCAATCAGTCAGCATTCGACAAATAAGTAAAAATAGAGCCGAACAAGTGGGATATTATCGGTTTTTGGA
GAATGAGAATGTGACAGTAGGGGAATTAGTGCGAAGCCTATCAGACCACTGTGTATCTCATGTAGAAGGAAAGCACATAT
TAGCCATCAGTGATACGAGCGAAATTAACTTGCAGTCTCATGTAGGCAGGTTGAAAGCTTTGGGTGTAGGTGTAGTAGGA
AACAACAAAGATGTAGGATTTTATATTCATCCAACACTAGTATTAGATGCAGAGAATGGATTTCCCTTGGGGATAAGCGC
AGTAAAACTGTGGACTAGAGATATCAACCATCAAGATAAGCATGAACGAAACTATCAGCTATTACCAATAGAAAAGAAAG
AATCATATAAGTGGCTACGCTCTGCCGAAGAAACGCAAAAATGTTTAACTATTGGTAATGCCAAAATCGTGACTCACATC
GGCGACCGCGAAAGCGATATATATGAGGAATTTGCGACAGTAGCGAATCGAGACAATCATGTATTGGTCAGAGCGCGCAT
TGACCGTCGTCTAGTGGGAAAGACCTCATCACTTTATACATACTTAAACCAACAGCCGAGCGCTACGGTGTACACACAAG
TCTTGAAATAA

Upstream 100 bases:

>100_bases
AGTCGGTGGAAAATCCAATCAGAATACACGCGCAAGAAGTTGAGGGAAAAGCATTTGGAGACCCAAGACTCTCTAAAAGG
GGGCGGCATTGTACGAAGCA

Downstream 100 bases:

>100_bases
CGCCTAACGCTTGGTTTCGTCGTCTAGCTCTAGGCTGTGCGATCGCTCTGGAAGCCTGTCATTGCGAGGAGGAACGACGA
AGCAATCACAAAAACTACAG

Product: transposase

Products: NA

Alternate protein names: Transposase IS4 Family Protein; Modified Transposase For Insertion Sequence NGRIS-18c

Number of amino acids: Translated: 216; Mature: 215

Protein sequence:

>216_residues
MGKHQSVSIRQISKNRAEQVGYYRFLENENVTVGELVRSLSDHCVSHVEGKHILAISDTSEINLQSHVGRLKALGVGVVG
NNKDVGFYIHPTLVLDAENGFPLGISAVKLWTRDINHQDKHERNYQLLPIEKKESYKWLRSAEETQKCLTIGNAKIVTHI
GDRESDIYEEFATVANRDNHVLVRARIDRRLVGKTSSLYTYLNQQPSATVYTQVLK

Sequences:

>Translated_216_residues
MGKHQSVSIRQISKNRAEQVGYYRFLENENVTVGELVRSLSDHCVSHVEGKHILAISDTSEINLQSHVGRLKALGVGVVG
NNKDVGFYIHPTLVLDAENGFPLGISAVKLWTRDINHQDKHERNYQLLPIEKKESYKWLRSAEETQKCLTIGNAKIVTHI
GDRESDIYEEFATVANRDNHVLVRARIDRRLVGKTSSLYTYLNQQPSATVYTQVLK
>Mature_215_residues
GKHQSVSIRQISKNRAEQVGYYRFLENENVTVGELVRSLSDHCVSHVEGKHILAISDTSEINLQSHVGRLKALGVGVVGN
NKDVGFYIHPTLVLDAENGFPLGISAVKLWTRDINHQDKHERNYQLLPIEKKESYKWLRSAEETQKCLTIGNAKIVTHIG
DRESDIYEEFATVANRDNHVLVRARIDRRLVGKTSSLYTYLNQQPSATVYTQVLK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24495; Mature: 24364

Theoretical pI: Translated: 8.97; Mature: 8.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGKHQSVSIRQISKNRAEQVGYYRFLENENVTVGELVRSLSDHCVSHVEGKHILAISDTS
CCCCCCCHHHHHHHHHHHHHHHEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCC
EINLQSHVGRLKALGVGVVGNNKDVGFYIHPTLVLDAENGFPLGISAVKLWTRDINHQDK
CCCHHHHHHHHHHEEEEEECCCCCEEEEECCEEEEECCCCCCCCHHHHHHHHHCCCCCCH
HERNYQLLPIEKKESYKWLRSAEETQKCLTIGNAKIVTHIGDRESDIYEEFATVANRDNH
HCCCCEEEECCCHHHHHHHHHHHHHHHHHEECCEEEEEECCCCCHHHHHHHHHHHCCCCE
VLVRARIDRRLVGKTSSLYTYLNQQPSATVYTQVLK
EEEEEECCHHHHCCHHHHHHHHCCCCCHHHHHHHCC
>Mature Secondary Structure 
GKHQSVSIRQISKNRAEQVGYYRFLENENVTVGELVRSLSDHCVSHVEGKHILAISDTS
CCCCCCHHHHHHHHHHHHHHHEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCC
EINLQSHVGRLKALGVGVVGNNKDVGFYIHPTLVLDAENGFPLGISAVKLWTRDINHQDK
CCCHHHHHHHHHHEEEEEECCCCCEEEEECCEEEEECCCCCCCCHHHHHHHHHCCCCCCH
HERNYQLLPIEKKESYKWLRSAEETQKCLTIGNAKIVTHIGDRESDIYEEFATVANRDNH
HCCCCEEEECCCHHHHHHHHHHHHHHHHHEECCEEEEEECCCCCHHHHHHHHHHHCCCCE
VLVRARIDRRLVGKTSSLYTYLNQQPSATVYTQVLK
EEEEEECCHHHHCCHHHHHHHHCCCCCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA