Click here to switch to the map view.

The map label for this gene is 17228754

Identifier: 17228754

GI number: 17228754

Start: 1493867

End: 1494652

Strand: Direct

Name: 17228754

Synonym: alr1259

Alternate gene names: NA

Gene position: 1493867-1494652 (Clockwise)

Preceding gene: 17228752

Following gene: 17228755

Centisome position: 23.29

GC content: 36.39

Gene sequence:

>786_bases
ATGATACTGTCTCGTCAATCTATTCTTGCTCCTTGTGTAGTCTGCTTATGTGCTTTAACCATTAGCTGGATACAATCTCC
CAGACTACAAAAGTTATTGAAGAATCAACAAGACATTTCTCTAGCAACGCTGGAAACAGATATTCAAGCAGAAAACCTGA
GACTCAATTTACTCAAAAAAACACCCAGTTTTGGCTACGATAACTTAATGGCTAATTGGGTATATTTAAATTTTTTACAA
TACTTTGGTGATGAAGAAATCAGAGCTAAAACAGGTTACAGTCTCAGTCCAGAATATTTTGAAATAATTATAGAACGTGA
TCCAAGATTTTTAGACGTTTATATTAGTCTTTCCACTAGTATTTCTCTTTATGCTGCTATGCCGGAACGATCCATTGCAC
TCATGGAAAAAGGCTTAAAGTCCCTAAAACCTCAGCTTCCTGAAAAGTCGTATCACGTATGGCGCTTCAAAGGAATTGAT
GAGTTACTTTTTCTAGGAAACGCTCAAGCCGCTCAAGAGTCTTTTGCCACCGCCGCAAGCTGGGCTAGTAACTATACAGA
TGAAGAAAGCAAAAATACAGCCCTGACATCTTTAAGGACAGCTAATTTTTTGAAACAAAATCCTAACAGTAAATATGCAC
AAATTTCTACTTGGGCAATGATATTAAATAATCAAGTAGATGATATAACACGCAAAAGAGCGATTAGTGAAATCGAAAAA
TTGGGAGGAAAGTTTATTATTAGTCCTGAAGGAGTTGGTAGGATTATGTTTCCACCACAAGATTAG

Upstream 100 bases:

>100_bases
CGTCCCTAAAAAAATCTTGCTTGTATTCTTTTATCAACCTGATATAAAGTTAAATATTTTTACGGGCAGACTACTTATAG
AAAAGAAAACTAGAAATATC

Downstream 100 bases:

>100_bases
TTATTGGTAATTGCTCAATAGTTTTATTCTTCTTTGCACCCCAGTCCCCAATCCCCAGTCCCCAGTCCCCAGTCCCCAAT
CCCCAACCCCCAAGATGTTC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 261; Mature: 261

Protein sequence:

>261_residues
MILSRQSILAPCVVCLCALTISWIQSPRLQKLLKNQQDISLATLETDIQAENLRLNLLKKTPSFGYDNLMANWVYLNFLQ
YFGDEEIRAKTGYSLSPEYFEIIIERDPRFLDVYISLSTSISLYAAMPERSIALMEKGLKSLKPQLPEKSYHVWRFKGID
ELLFLGNAQAAQESFATAASWASNYTDEESKNTALTSLRTANFLKQNPNSKYAQISTWAMILNNQVDDITRKRAISEIEK
LGGKFIISPEGVGRIMFPPQD

Sequences:

>Translated_261_residues
MILSRQSILAPCVVCLCALTISWIQSPRLQKLLKNQQDISLATLETDIQAENLRLNLLKKTPSFGYDNLMANWVYLNFLQ
YFGDEEIRAKTGYSLSPEYFEIIIERDPRFLDVYISLSTSISLYAAMPERSIALMEKGLKSLKPQLPEKSYHVWRFKGID
ELLFLGNAQAAQESFATAASWASNYTDEESKNTALTSLRTANFLKQNPNSKYAQISTWAMILNNQVDDITRKRAISEIEK
LGGKFIISPEGVGRIMFPPQD
>Mature_261_residues
MILSRQSILAPCVVCLCALTISWIQSPRLQKLLKNQQDISLATLETDIQAENLRLNLLKKTPSFGYDNLMANWVYLNFLQ
YFGDEEIRAKTGYSLSPEYFEIIIERDPRFLDVYISLSTSISLYAAMPERSIALMEKGLKSLKPQLPEKSYHVWRFKGID
ELLFLGNAQAAQESFATAASWASNYTDEESKNTALTSLRTANFLKQNPNSKYAQISTWAMILNNQVDDITRKRAISEIEK
LGGKFIISPEGVGRIMFPPQD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29648; Mature: 29648

Theoretical pI: Translated: 7.18; Mature: 7.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MILSRQSILAPCVVCLCALTISWIQSPRLQKLLKNQQDISLATLETDIQAENLRLNLLKK
CCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCEEEEEECCCCCCCEEEEEEEC
TPSFGYDNLMANWVYLNFLQYFGDEEIRAKTGYSLSPEYFEIIIERDPRFLDVYISLSTS
CCCCCHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCHHHHEEEEECCCCEEEEEEEECCC
ISLYAAMPERSIALMEKGLKSLKPQLPEKSYHVWRFKGIDELLFLGNAQAAQESFATAAS
EEEEEECCCHHHHHHHHHHHHHCCCCCCCCCEEEEECCHHHHHEECCCHHHHHHHHHHHH
WASNYTDEESKNTALTSLRTANFLKQNPNSKYAQISTWAMILNNQVDDITRKRAISEIEK
HHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
LGGKFIISPEGVGRIMFPPQD
CCCEEEECCCCCCEEECCCCC
>Mature Secondary Structure
MILSRQSILAPCVVCLCALTISWIQSPRLQKLLKNQQDISLATLETDIQAENLRLNLLKK
CCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCEEEEEECCCCCCCEEEEEEEC
TPSFGYDNLMANWVYLNFLQYFGDEEIRAKTGYSLSPEYFEIIIERDPRFLDVYISLSTS
CCCCCHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCHHHHEEEEECCCCEEEEEEEECCC
ISLYAAMPERSIALMEKGLKSLKPQLPEKSYHVWRFKGIDELLFLGNAQAAQESFATAAS
EEEEEECCCHHHHHHHHHHHHHCCCCCCCCCEEEEECCHHHHHEECCCHHHHHHHHHHHH
WASNYTDEESKNTALTSLRTANFLKQNPNSKYAQISTWAMILNNQVDDITRKRAISEIEK
HHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
LGGKFIISPEGVGRIMFPPQD
CCCEEEECCCCCCEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA