| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is 17228719
Identifier: 17228719
GI number: 17228719
Start: 1445295
End: 1445873
Strand: Direct
Name: 17228719
Synonym: alr1224
Alternate gene names: NA
Gene position: 1445295-1445873 (Clockwise)
Preceding gene: 17228718
Following gene: 17228724
Centisome position: 22.53
GC content: 40.93
Gene sequence:
>579_bases ATGTTCACAATCTCAGATTTAGAGCAGCTACAAGCTGAACATCCAGAATGGCAGATGGAACTGGTGGACGGAAGTATTTT GGTTATGGGGCCATCAGATTATATTTCAGAAGAAATCGGCGCTGAGTTAATTCGATTGCTTGGCAACTGGGTTCGCCCAC GTAAGTTAGGACGGGTAACTGGTTCTAGCGCTGGTTTTATTCTGCCTAGACTGGAAACGGAAAATGGCATCGAAGCTGAT ATAGAAAAGCGTAATCTCCGCGCTCCTGATGTATCTTTTGTGCGTGCGGAGAGACTAAAAATCAGCAAGCGTGATTTTGT GGAATTAGTCCCTGACTTGATGGTAGAAATTAAATCTAAATCAGACCGCATCAAGCCACTGGAAGAAAAAATTCAATTAT TTTTACAACTAGGGTCTACGGTGGGGATTCTCATCGACCCAGATAAATTAACATTAACTGTTTACAGAATTAATCAAGAG CCAGTAATTTTACAAAATAACGATAAATTGACATTACCTGATTTACTTCCAGGTTGGGAGTTAACAGTATCAGAAATTTG GCCGCCTGTGTTTGAGTGA
Upstream 100 bases:
>100_bases TTCTTAGTCATTAGTCATAAGACTTTGAACTTAGCTAAGATAGCTAACTGTTTTGATCAGCTTGTAGGAACATAGATATA AATGGATTATTTCTCATCTT
Downstream 100 bases:
>100_bases GATTGGGACAGGTTGCTTGTGTTCATATCCCCAGTCCCCAATCCAAGGCAAAAGTAAAAAGGCAAAAGTAAAAAGATAAA AGATTTTTACTTTTTACTTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 192; Mature: 192
Protein sequence:
>192_residues MFTISDLEQLQAEHPEWQMELVDGSILVMGPSDYISEEIGAELIRLLGNWVRPRKLGRVTGSSAGFILPRLETENGIEAD IEKRNLRAPDVSFVRAERLKISKRDFVELVPDLMVEIKSKSDRIKPLEEKIQLFLQLGSTVGILIDPDKLTLTVYRINQE PVILQNNDKLTLPDLLPGWELTVSEIWPPVFE
Sequences:
>Translated_192_residues MFTISDLEQLQAEHPEWQMELVDGSILVMGPSDYISEEIGAELIRLLGNWVRPRKLGRVTGSSAGFILPRLETENGIEAD IEKRNLRAPDVSFVRAERLKISKRDFVELVPDLMVEIKSKSDRIKPLEEKIQLFLQLGSTVGILIDPDKLTLTVYRINQE PVILQNNDKLTLPDLLPGWELTVSEIWPPVFE >Mature_192_residues MFTISDLEQLQAEHPEWQMELVDGSILVMGPSDYISEEIGAELIRLLGNWVRPRKLGRVTGSSAGFILPRLETENGIEAD IEKRNLRAPDVSFVRAERLKISKRDFVELVPDLMVEIKSKSDRIKPLEEKIQLFLQLGSTVGILIDPDKLTLTVYRINQE PVILQNNDKLTLPDLLPGWELTVSEIWPPVFE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21873; Mature: 21873
Theoretical pI: Translated: 4.45; Mature: 4.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFTISDLEQLQAEHPEWQMELVDGSILVMGPSDYISEEIGAELIRLLGNWVRPRKLGRVT CCCHHHHHHHHHCCCCEEEEEECCEEEEECCHHHHHHHHHHHHHHHHHHHCCCHHHCCCC GSSAGFILPRLETENGIEADIEKRNLRAPDVSFVRAERLKISKRDFVELVPDLMVEIKSK CCCCCEEEEEECCCCCCCCCHHHCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHCC SDRIKPLEEKIQLFLQLGSTVGILIDPDKLTLTVYRINQEPVILQNNDKLTLPDLLPGWE CCCCCCHHHHHHHHHHHCCEEEEEECCCCEEEEEEEECCCCEEEECCCCEECCCCCCCCE LTVSEIWPPVFE EEHHHCCCCCCC >Mature Secondary Structure MFTISDLEQLQAEHPEWQMELVDGSILVMGPSDYISEEIGAELIRLLGNWVRPRKLGRVT CCCHHHHHHHHHCCCCEEEEEECCEEEEECCHHHHHHHHHHHHHHHHHHHCCCHHHCCCC GSSAGFILPRLETENGIEADIEKRNLRAPDVSFVRAERLKISKRDFVELVPDLMVEIKSK CCCCCEEEEEECCCCCCCCCHHHCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHCC SDRIKPLEEKIQLFLQLGSTVGILIDPDKLTLTVYRINQEPVILQNNDKLTLPDLLPGWE CCCCCCHHHHHHHHHHHCCEEEEEECCCCEEEEEEEECCCCEEEECCCCEECCCCCCCCE LTVSEIWPPVFE EEHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA