| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is 17228701
Identifier: 17228701
GI number: 17228701
Start: 1421668
End: 1422222
Strand: Direct
Name: 17228701
Synonym: alr1206
Alternate gene names: NA
Gene position: 1421668-1422222 (Clockwise)
Preceding gene: 17228699
Following gene: 17228702
Centisome position: 22.17
GC content: 42.52
Gene sequence:
>555_bases ATGACCATACTAGAAACAAGTAACACTCCTGTTGGTGGTTACGCGCCAGATTTTGAATTACCAGGGATTGATAATCAAGT CCATCATCTCAGTCGTTATTTAGATAATTTTCGCGCAGTTGGCGTAGTTTCTTTGGGGAATTACTGCTCTTATGTAAATT TATATCTAGACCGGTTAAAAGGCATTCAAGGGGAATTTGGGACGGATGGCTTTATCTTAATTGGCATAAATGCTAGTGAC ATTACCGAGCCAAGTTGGTCAAGCTTAGAGAAAATGAAAGCCTTTGCCCAAAATCACGAGTTAAACTTTCCTTACCTGTG GGATTCGACCCAAGAAGTTAGCAGAAGCTTTGGCGCTACTAAAACACCGATCGCCTTCTTGATCGACAGTCATGGTATAT TGCGATATAGAGGGCAGATTGACAATCATCCTCAAGAGCCATCATCTGTAGGTGAAGACTACCTGCGAAATGCGATCGCT GCTCTGTTTAAAGGCGAAGAAATCCTAGTACCTGAGACGGAACCAGTAGGCACTTCATTGATCTGGCGTATATAG
Upstream 100 bases:
>100_bases GTACTGGATACAAAGCATCTACTAATAGGTGAGCTAAACCTAAACGCTAAGGTTAAATTTCACCTAGATTTTTGTTCCTA GTGCAGGCTGGCTAAAGAAA
Downstream 100 bases:
>100_bases ACATAGATAGTCATTGTACTGCTATCTTAAATTGGAGGCACTTGCAACTTTTTTGATAAAGCGGAACTTCATGGGAACGA ATTACCGACGGGTTTTACTC
Product: hypothetical protein
Products: NA
Alternate protein names: Redoxin Domain Protein; Thiol-Disulfide Isomerase/Thioredoxin; Redoxin Superfamily; Thiol-Disulfide Isomerase Or Thioredoxin; Redoxin; Peroxiredoxin; Antioxidant AhpC/TSA Family; Alkyl Hydroperoxide Reductase; Thiol-Disulfide Isomerase; Thioredoxin; Thioredoxin Domain-Containing Protein; Anti-Oxidant AhpCTSA Family Protein; Thiol-Disulfide Isomerase Thioredoxin Family; Peroxiredoxin-Like Protein; Thiol-Disulfide Isomerase And Thioredoxin; Thiol-Disulfide Isomerase-Like Protein; Thiol-Disulfide Isomerase And Thioredoxins
Number of amino acids: Translated: 184; Mature: 183
Protein sequence:
>184_residues MTILETSNTPVGGYAPDFELPGIDNQVHHLSRYLDNFRAVGVVSLGNYCSYVNLYLDRLKGIQGEFGTDGFILIGINASD ITEPSWSSLEKMKAFAQNHELNFPYLWDSTQEVSRSFGATKTPIAFLIDSHGILRYRGQIDNHPQEPSSVGEDYLRNAIA ALFKGEEILVPETEPVGTSLIWRI
Sequences:
>Translated_184_residues MTILETSNTPVGGYAPDFELPGIDNQVHHLSRYLDNFRAVGVVSLGNYCSYVNLYLDRLKGIQGEFGTDGFILIGINASD ITEPSWSSLEKMKAFAQNHELNFPYLWDSTQEVSRSFGATKTPIAFLIDSHGILRYRGQIDNHPQEPSSVGEDYLRNAIA ALFKGEEILVPETEPVGTSLIWRI >Mature_183_residues TILETSNTPVGGYAPDFELPGIDNQVHHLSRYLDNFRAVGVVSLGNYCSYVNLYLDRLKGIQGEFGTDGFILIGINASDI TEPSWSSLEKMKAFAQNHELNFPYLWDSTQEVSRSFGATKTPIAFLIDSHGILRYRGQIDNHPQEPSSVGEDYLRNAIAA LFKGEEILVPETEPVGTSLIWRI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20525; Mature: 20394
Theoretical pI: Translated: 4.58; Mature: 4.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTILETSNTPVGGYAPDFELPGIDNQVHHLSRYLDNFRAVGVVSLGNYCSYVNLYLDRLK CEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHEEEEECCCHHHHHHHHHHHHC GIQGEFGTDGFILIGINASDITEPSWSSLEKMKAFAQNHELNFPYLWDSTQEVSRSFGAT CCCCCCCCCCEEEEEECHHHCCCCCHHHHHHHHHHHHCCCCCCCEEECCHHHHHHHCCCC KTPIAFLIDSHGILRYRGQIDNHPQEPSSVGEDYLRNAIAALFKGEEILVPETEPVGTSL CCCEEEEECCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCEE IWRI EEEC >Mature Secondary Structure TILETSNTPVGGYAPDFELPGIDNQVHHLSRYLDNFRAVGVVSLGNYCSYVNLYLDRLK EEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHEEEEECCCHHHHHHHHHHHHC GIQGEFGTDGFILIGINASDITEPSWSSLEKMKAFAQNHELNFPYLWDSTQEVSRSFGAT CCCCCCCCCCEEEEEECHHHCCCCCHHHHHHHHHHHHCCCCCCCEEECCHHHHHHHCCCC KTPIAFLIDSHGILRYRGQIDNHPQEPSSVGEDYLRNAIAALFKGEEILVPETEPVGTSL CCCEEEEECCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCEE IWRI EEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA