Definition Nostoc sp. PCC 7120, complete genome.
Accession NC_003272
Length 6,413,771

Click here to switch to the map view.

The map label for this gene is 17228697

Identifier: 17228697

GI number: 17228697

Start: 1418141

End: 1418329

Strand: Direct

Name: 17228697

Synonym: asr1202

Alternate gene names: NA

Gene position: 1418141-1418329 (Clockwise)

Preceding gene: 17228696

Following gene: 17228698

Centisome position: 22.11

GC content: 40.74

Gene sequence:

>189_bases
ATGTCAAACCAAATGCTAGCTTCTAATTTACTTGAAGATTTATCCTTAGATCAACAGCAATCTTTGGCTGGTGGTCAAAC
CTTTGATGATGGAGATGATGAAGGCGGAAATACACGACTTGGCACTGGTGAAACTCGTCGCTATAGAATTAGAAGTGTCA
GCATCGTTAGTGTCCGCAAATTGTCATAG

Upstream 100 bases:

>100_bases
TAAATACTACTACAGAATAATTTAAATAAACAAGTGATATTGAATAATAAAAACATAGGTAATAACAAACCTATGTTGTA
CGTAAGTGAGGTAAAAGTTC

Downstream 100 bases:

>100_bases
TTAGTGGTGAATGGAGTGAACTGAAATAAACCGCTCAAAGCCTAATTGTATTTGAGCATTTCTACACCATCTCCTATTTT
CTGCTAAATATAATTAAGCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 62; Mature: 61

Protein sequence:

>62_residues
MSNQMLASNLLEDLSLDQQQSLAGGQTFDDGDDEGGNTRLGTGETRRYRIRSVSIVSVRKLS

Sequences:

>Translated_62_residues
MSNQMLASNLLEDLSLDQQQSLAGGQTFDDGDDEGGNTRLGTGETRRYRIRSVSIVSVRKLS
>Mature_61_residues
SNQMLASNLLEDLSLDQQQSLAGGQTFDDGDDEGGNTRLGTGETRRYRIRSVSIVSVRKLS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 6789; Mature: 6657

Theoretical pI: Translated: 4.54; Mature: 4.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNQMLASNLLEDLSLDQQQSLAGGQTFDDGDDEGGNTRLGTGETRRYRIRSVSIVSVRK
CCCCHHHHHHHHHCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECEEEEEEE
LS
CC
>Mature Secondary Structure 
SNQMLASNLLEDLSLDQQQSLAGGQTFDDGDDEGGNTRLGTGETRRYRIRSVSIVSVRK
CCCHHHHHHHHHCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECEEEEEEE
LS
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA