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The map label for this gene is 17228662

Identifier: 17228662

GI number: 17228662

Start: 1369858

End: 1370586

Strand: Direct

Name: 17228662

Synonym: alr1167

Alternate gene names: NA

Gene position: 1369858-1370586 (Clockwise)

Preceding gene: 17228661

Following gene: 17228665

Centisome position: 21.36

GC content: 40.88

Gene sequence:

>729_bases
ATGAGTATCACCGAGACGCTCAGAAAAGGGTCAAAAGGCTCAGATGTGAGCGAACTGCAAGAAATATTAATTAAACTAAA
ATTCGACCCAGGTCGGATAGATGGTGATTTCGGTAACAAAACAGAAGCGGCTGTCAAACAATTCCAGCAAAGGCAAAGTA
TTACTCCTGATGGCGTAGTAGAGATAAATACTCGTAATGCCTTAAATAAAGCAATTCAGAGGCAAATAGAAATAGCAAAA
CTTTATGGTGGGGCTTCCGGTAAATTACCACTACCAGGGGTGAATTTGATCAAGGAATTTGAAGGTTGTAAGCTGATAGC
TTATCCAGATCCCCTCTCTAAAGGTAAACCTTACACCATTGGTTGGGGTTCTACCGTCAAAAAAGATGGTAGCGAATGGT
CGTTGGGTGAAAAAATGACCCAAGTGGAGGCGGATGAACTGTTAATTCTTCAGTTAGAGCGTAAATATTTACCATCTCTA
GAGAAAATACCCGGATGGGAAAATTTAAATCCTTACCAACAAGGAGCATTATTAAGTTTTGCCTATAACTTGGGTGCGAA
TTTCTACGGTTCTAAGGGCTTTGAGACAATTACTAGAGTTTTGAACAATCAAGAGTGGGACAAAATTGAACCCACACTAA
CTATGTATAGAAATCCGGGTAGTTCAGTTGAGGCGGGTTTGAGGCGCAGGCGAGTAGCTGAGGCTAAACTATTTCTTCAG
CCATTGTAA

Upstream 100 bases:

>100_bases
CCAGAACCACATATAATTTTTTATTACAGATGCTTTGCGTGTAAAGACAGAAAGGTTTGATTAGTAATTGTATATATTAA
TTAAATAAAATGCACGTAAT

Downstream 100 bases:

>100_bases
AAGGGAAAGGGCTAAAAATATGTCATGATGGCTCGTCACAATTGAGCCGATGATTTACTTTGGAGTGCCAAGAAAAGGAC
AATTATTTCACTCATCACAC

Product: lysin

Products: NA

Alternate protein names: Glycoside Hydrolase Family; Phage-Related Lysozyme; Phage Lysozyme; Glycoside Hydrolase Family Protein

Number of amino acids: Translated: 242; Mature: 241

Protein sequence:

>242_residues
MSITETLRKGSKGSDVSELQEILIKLKFDPGRIDGDFGNKTEAAVKQFQQRQSITPDGVVEINTRNALNKAIQRQIEIAK
LYGGASGKLPLPGVNLIKEFEGCKLIAYPDPLSKGKPYTIGWGSTVKKDGSEWSLGEKMTQVEADELLILQLERKYLPSL
EKIPGWENLNPYQQGALLSFAYNLGANFYGSKGFETITRVLNNQEWDKIEPTLTMYRNPGSSVEAGLRRRRVAEAKLFLQ
PL

Sequences:

>Translated_242_residues
MSITETLRKGSKGSDVSELQEILIKLKFDPGRIDGDFGNKTEAAVKQFQQRQSITPDGVVEINTRNALNKAIQRQIEIAK
LYGGASGKLPLPGVNLIKEFEGCKLIAYPDPLSKGKPYTIGWGSTVKKDGSEWSLGEKMTQVEADELLILQLERKYLPSL
EKIPGWENLNPYQQGALLSFAYNLGANFYGSKGFETITRVLNNQEWDKIEPTLTMYRNPGSSVEAGLRRRRVAEAKLFLQ
PL
>Mature_241_residues
SITETLRKGSKGSDVSELQEILIKLKFDPGRIDGDFGNKTEAAVKQFQQRQSITPDGVVEINTRNALNKAIQRQIEIAKL
YGGASGKLPLPGVNLIKEFEGCKLIAYPDPLSKGKPYTIGWGSTVKKDGSEWSLGEKMTQVEADELLILQLERKYLPSLE
KIPGWENLNPYQQGALLSFAYNLGANFYGSKGFETITRVLNNQEWDKIEPTLTMYRNPGSSVEAGLRRRRVAEAKLFLQP
L

Specific function: Unknown

COG id: COG3772

COG function: function code R; Phage-related lysozyme (muraminidase)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27021; Mature: 26890

Theoretical pI: Translated: 9.42; Mature: 9.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSITETLRKGSKGSDVSELQEILIKLKFDPGRIDGDFGNKTEAAVKQFQQRQSITPDGVV
CCHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEE
EINTRNALNKAIQRQIEIAKLYGGASGKLPLPGVNLIKEFEGCKLIAYPDPLSKGKPYTI
EECCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHCCCCEEEECCCCCCCCCCEEE
GWGSTVKKDGSEWSLGEKMTQVEADELLILQLERKYLPSLEKIPGWENLNPYQQGALLSF
ECCCCCCCCCCCCCHHHHHHHHCCCCEEEEEECHHHCCCHHHCCCCCCCCHHHHHHHHHH
AYNLGANFYGSKGFETITRVLNNQEWDKIEPTLTMYRNPGSSVEAGLRRRRVAEAKLFLQ
HHHHCCCCCCCCHHHHHHHHHCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHC
PL
CC
>Mature Secondary Structure 
SITETLRKGSKGSDVSELQEILIKLKFDPGRIDGDFGNKTEAAVKQFQQRQSITPDGVV
CHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEE
EINTRNALNKAIQRQIEIAKLYGGASGKLPLPGVNLIKEFEGCKLIAYPDPLSKGKPYTI
EECCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHCCCCEEEECCCCCCCCCCEEE
GWGSTVKKDGSEWSLGEKMTQVEADELLILQLERKYLPSLEKIPGWENLNPYQQGALLSF
ECCCCCCCCCCCCCHHHHHHHHCCCCEEEEEECHHHCCCHHHCCCCCCCCHHHHHHHHHH
AYNLGANFYGSKGFETITRVLNNQEWDKIEPTLTMYRNPGSSVEAGLRRRRVAEAKLFLQ
HHHHCCCCCCCCHHHHHHHHHCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHC
PL
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA