Click here to switch to the map view.

The map label for this gene is sopA [C]

Identifier: 17228608

GI number: 17228608

Start: 1304511

End: 1305893

Strand: Direct

Name: sopA [C]

Synonym: alr1113

Alternate gene names: 17228608

Gene position: 1304511-1305893 (Clockwise)

Preceding gene: 17228607

Following gene: 17228609

Centisome position: 20.34

GC content: 33.62

Gene sequence:

>1383_bases
GTGGGGTTTAATCCTGAGCTTTGCCGTAACGAAAGCGAAGTTGAAAGCAAACTGATTGTGCAATATTTATTACCGCAGCT
AGGATATACTCCAGACACTTGGCATCAAGAAATTGCAGTTGGTAGCATTCGATTAGATTTTTTAGCCTTTGCTGCACAAG
TCCTTCCCTTTGTTTTAGATGCTAACTCGCCATTGAGTGTGGTGATGGAAGCAAAGCATCCTAAGCAAAATTTAAATAAT
CATGTTCCCAGACTCAGGCACTATTTAACCAGTCTGAATGTTAGGTATGGTTTATTAACTAATGGTAAGGAGATAAGAAT
TTATGAAAAGGTTAAAAATGATGTTCAGCTAGTTTTCCAGTGTTCTGGGAAGGAGGTTGAGATAAAGTTAGAGGAAATTC
AAGATTTAATCGGTCGAGAAAGTCTAAAAGAAAGACAGTTAATCGATCAATCAAAAATTAATCAAGTCGAAGTCAAAGAA
AAAAAATTACAGAATCAGGGTCAACATAGTATGAAAACAATTGCCATTTATCATAATAAAGGTGGTGTTGGTAAAACCAC
TGTTGCTGTCAACCTTGCGGCAGCATTAAGTAAGAAAGGGAAAAAAGTACTTTTGATTGATATAGATTCTCAGGCAAATA
CTACTTTTGCAACAGGACTAATTAAATTTCAATTTGATGAAGAAGACGATTTACGTAATCAGAATGTATCAGATTTACTA
GAATCAGCCGACTTTAATTTTATATCAGATGTTAAACGTCAATCTCACTATTTTAATAATCCAGAAATAGATGTTGTTCC
TTCTCACATTAACTTAATTGATAAGCAAGATAAACTAAATCAAATAGCAGTTAGTAGACCTCGGTTAATTTCTAAACTCA
AAATCGTAGAAAATGATTATGACATCATAATTATTGATACTCCCCCGTCAAGAGACTATTATGCTCAAGTTGCACTGATT
GCTTCTGATTATTTGATCATTCCTTCAGATTTAAAACCATTTGCCAATCAGGGCTTGCCAACAGTGAAAAATTTTGTTAA
TGAGATTAATGAATATAGAGTAATGATGGGAAAATCAGCACTCCAAGTAATAGGAGTTCTTGCTTCTAAGATTTCAACTA
ATGCTAAATTTTTGCAGTACACTTTTCCAAAACAAAGGGATGTAATATCTGAGCGATATGGCTTACCTTTGATGGAAGCG
GTTATTTATGATAGAACTTCTCTATCAGAATGTATGAATAATTCTATGACTATTGGAGAGTTAGAATATCCAGATCCTAA
ATCAATTATTAAGTATGCAGAAACAAAAGCCAATGCCCAACAATCTGCTATGGAATTTGAGGTATTAGCTAAAGAAGTGT
TAAACAAAATAGGAGTTAATTAA

Upstream 100 bases:

>100_bases
TAGGTAATTCTTATGCCATAAATACTTTAGGCTATGAGATAATTAAACGCAGAAAAAATTTGACCAAAAATCTAAATTTT
ATTTTTAGGGGTAAACAGTT

Downstream 100 bases:

>100_bases
ATATGAAGTTTTATACTGTTGATGTAAAAAATATTTCTTCTGACGTACCTGCTTCCAATTTTGTAAATGATGAGTTGAAT
AGCCTAGCTGATAATATTAT

Product: ParA family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 460; Mature: 459

Protein sequence:

>460_residues
MGFNPELCRNESEVESKLIVQYLLPQLGYTPDTWHQEIAVGSIRLDFLAFAAQVLPFVLDANSPLSVVMEAKHPKQNLNN
HVPRLRHYLTSLNVRYGLLTNGKEIRIYEKVKNDVQLVFQCSGKEVEIKLEEIQDLIGRESLKERQLIDQSKINQVEVKE
KKLQNQGQHSMKTIAIYHNKGGVGKTTVAVNLAAALSKKGKKVLLIDIDSQANTTFATGLIKFQFDEEDDLRNQNVSDLL
ESADFNFISDVKRQSHYFNNPEIDVVPSHINLIDKQDKLNQIAVSRPRLISKLKIVENDYDIIIIDTPPSRDYYAQVALI
ASDYLIIPSDLKPFANQGLPTVKNFVNEINEYRVMMGKSALQVIGVLASKISTNAKFLQYTFPKQRDVISERYGLPLMEA
VIYDRTSLSECMNNSMTIGELEYPDPKSIIKYAETKANAQQSAMEFEVLAKEVLNKIGVN

Sequences:

>Translated_460_residues
MGFNPELCRNESEVESKLIVQYLLPQLGYTPDTWHQEIAVGSIRLDFLAFAAQVLPFVLDANSPLSVVMEAKHPKQNLNN
HVPRLRHYLTSLNVRYGLLTNGKEIRIYEKVKNDVQLVFQCSGKEVEIKLEEIQDLIGRESLKERQLIDQSKINQVEVKE
KKLQNQGQHSMKTIAIYHNKGGVGKTTVAVNLAAALSKKGKKVLLIDIDSQANTTFATGLIKFQFDEEDDLRNQNVSDLL
ESADFNFISDVKRQSHYFNNPEIDVVPSHINLIDKQDKLNQIAVSRPRLISKLKIVENDYDIIIIDTPPSRDYYAQVALI
ASDYLIIPSDLKPFANQGLPTVKNFVNEINEYRVMMGKSALQVIGVLASKISTNAKFLQYTFPKQRDVISERYGLPLMEA
VIYDRTSLSECMNNSMTIGELEYPDPKSIIKYAETKANAQQSAMEFEVLAKEVLNKIGVN
>Mature_459_residues
GFNPELCRNESEVESKLIVQYLLPQLGYTPDTWHQEIAVGSIRLDFLAFAAQVLPFVLDANSPLSVVMEAKHPKQNLNNH
VPRLRHYLTSLNVRYGLLTNGKEIRIYEKVKNDVQLVFQCSGKEVEIKLEEIQDLIGRESLKERQLIDQSKINQVEVKEK
KLQNQGQHSMKTIAIYHNKGGVGKTTVAVNLAAALSKKGKKVLLIDIDSQANTTFATGLIKFQFDEEDDLRNQNVSDLLE
SADFNFISDVKRQSHYFNNPEIDVVPSHINLIDKQDKLNQIAVSRPRLISKLKIVENDYDIIIIDTPPSRDYYAQVALIA
SDYLIIPSDLKPFANQGLPTVKNFVNEINEYRVMMGKSALQVIGVLASKISTNAKFLQYTFPKQRDVISERYGLPLMEAV
IYDRTSLSECMNNSMTIGELEYPDPKSIIKYAETKANAQQSAMEFEVLAKEVLNKIGVN

Specific function: This Protein Is Essential For Plasmid Partition. It Ensures The Proper Distribution Of Newly Replicated Plasmids To Daughter Cells During Cell Division. Sopa Is Trans-Acting. [C]

COG id: COG1192

COG function: function code D; ATPases involved in chromosome partitioning

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To B.subtilis soj [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002586 [H]

Pfam domain/function: PF01656 CbiA [H]

EC number: NA

Molecular weight: Translated: 52078; Mature: 51947

Theoretical pI: Translated: 6.53; Mature: 6.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGFNPELCRNESEVESKLIVQYLLPQLGYTPDTWHQEIAVGSIRLDFLAFAAQVLPFVLD
CCCCHHHHCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
ANSPLSVVMEAKHPKQNLNNHVPRLRHYLTSLNVRYGLLTNGKEIRIYEKVKNDVQLVFQ
CCCCCEEEEECCCCHHHHHHHHHHHHHHHHHCCEEEEEEECCCEEEEHHHHCCCEEEEEE
CSGKEVEIKLEEIQDLIGRESLKERQLIDQSKINQVEVKEKKLQNQGQHSMKTIAIYHNK
ECCCEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCEEEEEEEECC
GGVGKTTVAVNLAAALSKKGKKVLLIDIDSQANTTFATGLIKFQFDEEDDLRNQNVSDLL
CCCCCHHHHHHHHHHHHCCCCEEEEEEECCCCCCEEEEEEEEEEECCCHHCCCCCHHHHH
ESADFNFISDVKRQSHYFNNPEIDVVPSHINLIDKQDKLNQIAVSRPRLISKLKIVENDY
HHCCCHHHHHHHHHHHCCCCCCEEEECCHHHHCCCHHHHHHHHHCCHHHHHHHHEEECCC
DIIIIDTPPSRDYYAQVALIASDYLIIPSDLKPFANQGLPTVKNFVNEINEYRVMMGKSA
CEEEEECCCCCCHHHEEEEEECCCEEECCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHH
LQVIGVLASKISTNAKFLQYTFPKQRDVISERYGLPLMEAVIYDRTSLSECMNNSMTIGE
HHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHCCHHHHHHHHCCHHHHHHHCCCCEEEE
LEYPDPKSIIKYAETKANAQQSAMEFEVLAKEVLNKIGVN
CCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
GFNPELCRNESEVESKLIVQYLLPQLGYTPDTWHQEIAVGSIRLDFLAFAAQVLPFVLD
CCCHHHHCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
ANSPLSVVMEAKHPKQNLNNHVPRLRHYLTSLNVRYGLLTNGKEIRIYEKVKNDVQLVFQ
CCCCCEEEEECCCCHHHHHHHHHHHHHHHHHCCEEEEEEECCCEEEEHHHHCCCEEEEEE
CSGKEVEIKLEEIQDLIGRESLKERQLIDQSKINQVEVKEKKLQNQGQHSMKTIAIYHNK
ECCCEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCEEEEEEEECC
GGVGKTTVAVNLAAALSKKGKKVLLIDIDSQANTTFATGLIKFQFDEEDDLRNQNVSDLL
CCCCCHHHHHHHHHHHHCCCCEEEEEEECCCCCCEEEEEEEEEEECCCHHCCCCCHHHHH
ESADFNFISDVKRQSHYFNNPEIDVVPSHINLIDKQDKLNQIAVSRPRLISKLKIVENDY
HHCCCHHHHHHHHHHHCCCCCCEEEECCHHHHCCCHHHHHHHHHCCHHHHHHHHEEECCC
DIIIIDTPPSRDYYAQVALIASDYLIIPSDLKPFANQGLPTVKNFVNEINEYRVMMGKSA
CEEEEECCCCCCHHHEEEEEECCCEEECCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHH
LQVIGVLASKISTNAKFLQYTFPKQRDVISERYGLPLMEAVIYDRTSLSECMNNSMTIGE
HHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHCCHHHHHHHHCCHHHHHHHCCCCEEEE
LEYPDPKSIIKYAETKANAQQSAMEFEVLAKEVLNKIGVN
CCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 12534463 [H]