| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is sphX [H]
Identifier: 17228589
GI number: 17228589
Start: 1282080
End: 1283138
Strand: Direct
Name: sphX [H]
Synonym: alr1094
Alternate gene names: 17228589
Gene position: 1282080-1283138 (Clockwise)
Preceding gene: 17228588
Following gene: 17228590
Centisome position: 19.99
GC content: 41.17
Gene sequence:
>1059_bases ATGAAAACAACAGCAGAGAAATTGGCTCTCACGCTGGGGATTTTTGCTGTCGTCAGTGGTTGCACAGCTACATCTAACAA CTCGACTCAATCTCCGGAGTCAGCAAAAGTCACCGAAGTTGCTAATTCAACAAAAGTAGCAAGTGTGACAGTTGACGGTT CAAGTACAGTTTATCCGATTACCCAGGCGATCGCTCAAGAGTTTCAAGCAAACTCCAAAAATAATCTCCAAGTTCAAGTG AATATTTCCGGTACTGGTGGCGGATTTGCCAAATTTTGTGCAGGGAAAACAGATATAAACAATGCCTCTCGACCGATTAC GCAAGCAGAGATGGCAGATTGTAACCGCAACGGCATCAGGTATATAGAATTACCAGTGGCTTTTGATGCCTTAACTATCG CTGTGAATCCCCAAAATGATTGGGCAAAAGATATTACAATTGCCGAACTGAAAAAGATTTGGGAACCTGGGGCGGAAGGA AAAATTACCCGTTGGAACCAAGTACGGGCATCTTGGCCAGATAGACCATTGAATTTATACGGTGCTGGTAAACAGTCTGG GACATTTGACTATTTTACAGAAGCCATCACAGGTAAGGCGAAAGCCAGCCGTAATGACTACACGGCTAGCGAAGATGATG AAGTTTTAGTTGCAGGTATTAGTAAAGACCCCAACGCGTTGGGTTACTTTGGCTATGCCTATTATGAAGAAAACCAAAAA AGCTTAAAAGTATTAGCAGTTGATAATGGCAAAGGTGCAATCATACCATCACGAGAAACAGTAGAAAAATCCAAATATCA GCCCCTTTCTCGACCTTTATTTATCTACGTCAATCCTTGGTCATCCCAAAATAAAAGTGCAGTTTATCAGTTTGCAGATT ACTACATTAAACAAGCGCCAAAAACTGCCAAGGCTGTGGGTTATGTACCCTTATCCAGTGAAGCTTACCAAATTAATTAT GTTCACTTAAATCAAGGTAAAGCAGGAACAGTATTTGCTGGTAAATCCCAGTTTGATTTAACGCTTAGTGAATTACTACG CAAGCAAAAGCAATTTTAA
Upstream 100 bases:
>100_bases TTGATGAATTTTTATGTAGAATAGCCTCACCTTGGTTGACATATCAATTTTTTTTGAAATGATATAGACATACCTAAATA TCACCATAAAGGTGGGGTAA
Downstream 100 bases:
>100_bases TAAATAGTTAACAGTTGACTGTTGACTGTTGACTGTTGACTAATAAAAATAGGAAAACGCATGAAAGTTCGTGTTGGTAT CAACGGATTTGGTAGGATGG
Product: periplasmic phosphate-binding protein of ABC transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 352; Mature: 352
Protein sequence:
>352_residues MKTTAEKLALTLGIFAVVSGCTATSNNSTQSPESAKVTEVANSTKVASVTVDGSSTVYPITQAIAQEFQANSKNNLQVQV NISGTGGGFAKFCAGKTDINNASRPITQAEMADCNRNGIRYIELPVAFDALTIAVNPQNDWAKDITIAELKKIWEPGAEG KITRWNQVRASWPDRPLNLYGAGKQSGTFDYFTEAITGKAKASRNDYTASEDDEVLVAGISKDPNALGYFGYAYYEENQK SLKVLAVDNGKGAIIPSRETVEKSKYQPLSRPLFIYVNPWSSQNKSAVYQFADYYIKQAPKTAKAVGYVPLSSEAYQINY VHLNQGKAGTVFAGKSQFDLTLSELLRKQKQF
Sequences:
>Translated_352_residues MKTTAEKLALTLGIFAVVSGCTATSNNSTQSPESAKVTEVANSTKVASVTVDGSSTVYPITQAIAQEFQANSKNNLQVQV NISGTGGGFAKFCAGKTDINNASRPITQAEMADCNRNGIRYIELPVAFDALTIAVNPQNDWAKDITIAELKKIWEPGAEG KITRWNQVRASWPDRPLNLYGAGKQSGTFDYFTEAITGKAKASRNDYTASEDDEVLVAGISKDPNALGYFGYAYYEENQK SLKVLAVDNGKGAIIPSRETVEKSKYQPLSRPLFIYVNPWSSQNKSAVYQFADYYIKQAPKTAKAVGYVPLSSEAYQINY VHLNQGKAGTVFAGKSQFDLTLSELLRKQKQF >Mature_352_residues MKTTAEKLALTLGIFAVVSGCTATSNNSTQSPESAKVTEVANSTKVASVTVDGSSTVYPITQAIAQEFQANSKNNLQVQV NISGTGGGFAKFCAGKTDINNASRPITQAEMADCNRNGIRYIELPVAFDALTIAVNPQNDWAKDITIAELKKIWEPGAEG KITRWNQVRASWPDRPLNLYGAGKQSGTFDYFTEAITGKAKASRNDYTASEDDEVLVAGISKDPNALGYFGYAYYEENQK SLKVLAVDNGKGAIIPSRETVEKSKYQPLSRPLFIYVNPWSSQNKSAVYQFADYYIKQAPKTAKAVGYVPLSSEAYQINY VHLNQGKAGTVFAGKSQFDLTLSELLRKQKQF
Specific function: May be involved in the system for phosphate transport across the cytoplasmic membrane [H]
COG id: COG0226
COG function: function code P; ABC-type phosphate transport system, periplasmic component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pstS family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011862 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38387; Mature: 38387
Theoretical pI: Translated: 9.06; Mature: 9.06
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTTAEKLALTLGIFAVVSGCTATSNNSTQSPESAKVTEVANSTKVASVTVDGSSTVYPI CCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHCCCCEEEEEEECCCCCCHHH TQAIAQEFQANSKNNLQVQVNISGTGGGFAKFCAGKTDINNASRPITQAEMADCNRNGIR HHHHHHHHHCCCCCCEEEEEEEECCCCCHHHHHCCCCCCCCCCCCCCHHHHHCCCCCCEE YIELPVAFDALTIAVNPQNDWAKDITIAELKKIWEPGAEGKITRWNQVRASWPDRPLNLY EEEEEEEEEEEEEEECCCCCCHHCCCHHHHHHHHCCCCCCCEEECHHHCCCCCCCCEEEE GAGKQSGTFDYFTEAITGKAKASRNDYTASEDDEVLVAGISKDPNALGYFGYAYYEENQK ECCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEECCCCCCCEEEEEEEEEECCCC SLKVLAVDNGKGAIIPSRETVEKSKYQPLSRPLFIYVNPWSSQNKSAVYQFADYYIKQAP EEEEEEEECCCEEEECCHHHHHHHHCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHCCC KTAKAVGYVPLSSEAYQINYVHLNQGKAGTVFAGKSQFDLTLSELLRKQKQF CCHHEEEEEECCCCEEEEEEEEECCCCCCEEEECCCCCCCHHHHHHHHHHCC >Mature Secondary Structure MKTTAEKLALTLGIFAVVSGCTATSNNSTQSPESAKVTEVANSTKVASVTVDGSSTVYPI CCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHCCCCEEEEEEECCCCCCHHH TQAIAQEFQANSKNNLQVQVNISGTGGGFAKFCAGKTDINNASRPITQAEMADCNRNGIR HHHHHHHHHCCCCCCEEEEEEEECCCCCHHHHHCCCCCCCCCCCCCCHHHHHCCCCCCEE YIELPVAFDALTIAVNPQNDWAKDITIAELKKIWEPGAEGKITRWNQVRASWPDRPLNLY EEEEEEEEEEEEEEECCCCCCHHCCCHHHHHHHHCCCCCCCEEECHHHCCCCCCCCEEEE GAGKQSGTFDYFTEAITGKAKASRNDYTASEDDEVLVAGISKDPNALGYFGYAYYEENQK ECCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEECCCCCCCEEEEEEEEEECCCC SLKVLAVDNGKGAIIPSRETVEKSKYQPLSRPLFIYVNPWSSQNKSAVYQFADYYIKQAP EEEEEEEECCCEEEECCHHHHHHHHCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHCCC KTAKAVGYVPLSSEAYQINYVHLNQGKAGTVFAGKSQFDLTLSELLRKQKQF CCHHEEEEEECCCCEEEEEEEEECCCCCCEEEECCCCCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8590279; 8905231 [H]