Definition | Nostoc sp. PCC 7120, complete genome. |
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Accession | NC_003272 |
Length | 6,413,771 |
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The map label for this gene is 17228533
Identifier: 17228533
GI number: 17228533
Start: 1209658
End: 1209900
Strand: Direct
Name: 17228533
Synonym: asr1038
Alternate gene names: NA
Gene position: 1209658-1209900 (Clockwise)
Preceding gene: 17228532
Following gene: 17228534
Centisome position: 18.86
GC content: 42.8
Gene sequence:
>243_bases ATGCAAGGCAAGTTTTTTATGTCCCAGGAAGAAAAGGAGAAGCTGTTTCATACACAGTTAGTCAAGTATGGAGTGAGATA TGAAAAAGCTGCAAGAGTGGCGACGATTTTAGCCTCTGGGAAACTGGAGGAGGTATTGACAGAAGAAGAGAAGCGGCTCG TCACCGAAGCTTGTCAACAGTGGCTTCAAGGACACAAACGCCATAAACAGATCGTCTCTCTGTTCAAATATATTAAAAGT TAG
Upstream 100 bases:
>100_bases TTTGAGGGAAGTTAAATAATCTTAATATTTGCAAAAATAAAAGTTATCAGCCGATTTCTACCTAAATTTGCAAAATTAGC TCTTTAGAGTCTTCACGCTC
Downstream 100 bases:
>100_bases ATATTAAGCAATACCTATGGCTGATGACTAACTTCACTTCTCGGATGCAGGCGGTACAATCACCGATTATTCCTGTAGTT GGGGAATTAATTCAAAATTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 80; Mature: 80
Protein sequence:
>80_residues MQGKFFMSQEEKEKLFHTQLVKYGVRYEKAARVATILASGKLEEVLTEEEKRLVTEACQQWLQGHKRHKQIVSLFKYIKS
Sequences:
>Translated_80_residues MQGKFFMSQEEKEKLFHTQLVKYGVRYEKAARVATILASGKLEEVLTEEEKRLVTEACQQWLQGHKRHKQIVSLFKYIKS >Mature_80_residues MQGKFFMSQEEKEKLFHTQLVKYGVRYEKAARVATILASGKLEEVLTEEEKRLVTEACQQWLQGHKRHKQIVSLFKYIKS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9458; Mature: 9458
Theoretical pI: Translated: 10.04; Mature: 10.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQGKFFMSQEEKEKLFHTQLVKYGVRYEKAARVATILASGKLEEVLTEEEKRLVTEACQQ CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH WLQGHKRHKQIVSLFKYIKS HHHHHHHHHHHHHHHHHHHC >Mature Secondary Structure MQGKFFMSQEEKEKLFHTQLVKYGVRYEKAARVATILASGKLEEVLTEEEKRLVTEACQQ CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH WLQGHKRHKQIVSLFKYIKS HHHHHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA