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The map label for this gene is yjqC [H]

Identifier: 17228493

GI number: 17228493

Start: 1169392

End: 1170306

Strand: Direct

Name: yjqC [H]

Synonym: alr0998

Alternate gene names: 17228493

Gene position: 1169392-1170306 (Clockwise)

Preceding gene: 17228491

Following gene: 17228494

Centisome position: 18.23

GC content: 45.03

Gene sequence:

>915_bases
ATGTTTTATCACGCTAAGAAATTGCAATATTTCAGACCACCCGAAAAACCAGATGCAGTCTACGCGAATAAAATCCAAGA
ACTCATCGGTGGGACTTTTGGAGAAATGACCGTAATGATGCAGTATCTGTTTCAAGGATGGAACTGTCGCGGGTCTGCCA
AGTATCGAGATTTGCTTCTAGATACAGGTACTGAAGAAATTGGTCATATTGAGATGTTGGCAACAATGATTGCCCATCTT
TTAGATAAAGCACCCATCAAAGTGCAGGAAGAAGGTGTAAGAGATGCAGTAGTGGGTGCTGTTATGGGTGGGACTAACCC
ACGGGATGTCATTATGAACGCAGCTATGAATCCCCAGCACTCTATTGTTTCTGGTTTAGGTGCGTTGCCAGCTGATAGTG
TAGGTTTTCCTTGGAATGGTCGCTTTATTGTTTCTAGTGGTAATTTACTAGCAGATTTTCGCTCAAATCTTCATGCTGAG
AGTCAGGGACGCTTACAAGCAGTGCGATTATATGAAATGAGCAACGACCCAGGGGTGAAAGATACCCTCAGTTTTATGAT
TGCTCGTGATACCATGCACCAAAACCAGTGGTTAGCAGCAATTGAAGATTTAGAGCAATCTGGACTAGAAAGTACTCCTG
TTCCCAGTTCCTTCCCCCTAGAATTAGAAAAGCGTGAATTTGCTTATCAGTTCTGGAATCACTCAGAAGGAACAGAAAGC
GCCGAGGGTCGCTGGGCAAAAGGCCCCTCAATGGATGGTAAAGGCGAATTTGAGTATGTTGCTAACCCCCAACCCTTGGG
GCCAGAACCACAACCACCACAACCCGACCCACAACTACACGGTACACAACAAATTCCCCATCCTCAACAAGGTAACGGCT
CTAGCGCACCTTCTTTAGTTGAGCGTATTTGCTAA

Upstream 100 bases:

>100_bases
TCGTGGCTGATGTAAATCATTGTTCTAGTTAGTTTCTTAGAAGAAATAAGCCACATACTTGATTTATGTGTCTGATTTCT
GTCACTAATTGGGCTACAAA

Downstream 100 bases:

>100_bases
TCTGAAAGTTCATCCATGCAGTTACTCTCAAGGGTTTGCACTAACTAAGGAGTTAACGTGATGTGCGACTTATTGTTTCG
TTACACAATTGAGGTGTATG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 304; Mature: 304

Protein sequence:

>304_residues
MFYHAKKLQYFRPPEKPDAVYANKIQELIGGTFGEMTVMMQYLFQGWNCRGSAKYRDLLLDTGTEEIGHIEMLATMIAHL
LDKAPIKVQEEGVRDAVVGAVMGGTNPRDVIMNAAMNPQHSIVSGLGALPADSVGFPWNGRFIVSSGNLLADFRSNLHAE
SQGRLQAVRLYEMSNDPGVKDTLSFMIARDTMHQNQWLAAIEDLEQSGLESTPVPSSFPLELEKREFAYQFWNHSEGTES
AEGRWAKGPSMDGKGEFEYVANPQPLGPEPQPPQPDPQLHGTQQIPHPQQGNGSSAPSLVERIC

Sequences:

>Translated_304_residues
MFYHAKKLQYFRPPEKPDAVYANKIQELIGGTFGEMTVMMQYLFQGWNCRGSAKYRDLLLDTGTEEIGHIEMLATMIAHL
LDKAPIKVQEEGVRDAVVGAVMGGTNPRDVIMNAAMNPQHSIVSGLGALPADSVGFPWNGRFIVSSGNLLADFRSNLHAE
SQGRLQAVRLYEMSNDPGVKDTLSFMIARDTMHQNQWLAAIEDLEQSGLESTPVPSSFPLELEKREFAYQFWNHSEGTES
AEGRWAKGPSMDGKGEFEYVANPQPLGPEPQPPQPDPQLHGTQQIPHPQQGNGSSAPSLVERIC
>Mature_304_residues
MFYHAKKLQYFRPPEKPDAVYANKIQELIGGTFGEMTVMMQYLFQGWNCRGSAKYRDLLLDTGTEEIGHIEMLATMIAHL
LDKAPIKVQEEGVRDAVVGAVMGGTNPRDVIMNAAMNPQHSIVSGLGALPADSVGFPWNGRFIVSSGNLLADFRSNLHAE
SQGRLQAVRLYEMSNDPGVKDTLSFMIARDTMHQNQWLAAIEDLEQSGLESTPVPSSFPLELEKREFAYQFWNHSEGTES
AEGRWAKGPSMDGKGEFEYVANPQPLGPEPQPPQPDPQLHGTQQIPHPQQGNGSSAPSLVERIC

Specific function: Unknown

COG id: COG3546

COG function: function code P; Mn-containing catalase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the manganese catalase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007760
- InterPro:   IPR012347
- InterPro:   IPR009078 [H]

Pfam domain/function: PF05067 Mn_catalase [H]

EC number: NA

Molecular weight: Translated: 33608; Mature: 33608

Theoretical pI: Translated: 4.93; Mature: 4.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFYHAKKLQYFRPPEKPDAVYANKIQELIGGTFGEMTVMMQYLFQGWNCRGSAKYRDLLL
CCCCCCHHHHCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHH
DTGTEEIGHIEMLATMIAHLLDKAPIKVQEEGVRDAVVGAVMGGTNPRDVIMNAAMNPQH
HCCCHHHHHHHHHHHHHHHHHCCCCCEEHHCCHHHHHHHHHHCCCCHHHHHHHCCCCCHH
SIVSGLGALPADSVGFPWNGRFIVSSGNLLADFRSNLHAESQGRLQAVRLYEMSNDPGVK
HHHHHHCCCCCCCCCCCCCCEEEEECCCCHHHHHHCCCCCCCCCEEEEEEEECCCCCCHH
DTLSFMIARDTMHQNQWLAAIEDLEQSGLESTPVPSSFPLELEKREFAYQFWNHSEGTES
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCC
AEGRWAKGPSMDGKGEFEYVANPQPLGPEPQPPQPDPQLHGTQQIPHPQQGNGSSAPSLV
CCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH
ERIC
HHHC
>Mature Secondary Structure
MFYHAKKLQYFRPPEKPDAVYANKIQELIGGTFGEMTVMMQYLFQGWNCRGSAKYRDLLL
CCCCCCHHHHCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHH
DTGTEEIGHIEMLATMIAHLLDKAPIKVQEEGVRDAVVGAVMGGTNPRDVIMNAAMNPQH
HCCCHHHHHHHHHHHHHHHHHCCCCCEEHHCCHHHHHHHHHHCCCCHHHHHHHCCCCCHH
SIVSGLGALPADSVGFPWNGRFIVSSGNLLADFRSNLHAESQGRLQAVRLYEMSNDPGVK
HHHHHHCCCCCCCCCCCCCCEEEEECCCCHHHHHHCCCCCCCCCEEEEEEEECCCCCCHH
DTLSFMIARDTMHQNQWLAAIEDLEQSGLESTPVPSSFPLELEKREFAYQFWNHSEGTES
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCC
AEGRWAKGPSMDGKGEFEYVANPQPLGPEPQPPQPDPQLHGTQQIPHPQQGNGSSAPSLV
CCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH
ERIC
HHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]