| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is 17228352
Identifier: 17228352
GI number: 17228352
Start: 983987
End: 984376
Strand: Direct
Name: 17228352
Synonym: alr0857
Alternate gene names: NA
Gene position: 983987-984376 (Clockwise)
Preceding gene: 17228351
Following gene: 17228364
Centisome position: 15.34
GC content: 44.1
Gene sequence:
>390_bases ATGCTGAAATTAACTTACACAGAGAACAGCTTTTATTTGGAATGTTTCACATTGTCTTTGGAGGAATGGGTAGCGCAACG AGTAATTTTTACACTCCGGCTAGGTCAAAACTTGTGCGTCCAACCCAGCACCGCTTCCTTTTTGTTACCTGTAGATTTAC CGGGAATTGAAGCGCTAAAAGCAGAAGCCATAAGGGCTGACAGTGAAATCATTGACTTGGTGACTTGTGATCCTGAGTAT CTGGAAATAACTTTGCGGGGTTCTTGGTTGTCAGATGGTTCTGAAGATGCTGATGGCGTGTTTGTGACTCACATGAGCGA TCGCACCGAATTTTTTCTACATAAACTCTGGCACGCAGCTCAAGCCTGTGCTTCTGTGATGAGCGAATAA
Upstream 100 bases:
>100_bases CCGGCAGTAGCTTTTGCAGTCAGCGACGCTTGGCGTGATAGCGCCACACAGTTTTGGATAGATATGCAGGCAAACCTGGA GTAACAGGAGAGCAGAAGGA
Downstream 100 bases:
>100_bases GAAAGGTTAGTTCTGAGTTATGAGTAACATCCACTAATAACTCAGCATTTATTACACTAAACGAAACATAAATGGATAGC GATAAGGTACATTTGGCGTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 129; Mature: 129
Protein sequence:
>129_residues MLKLTYTENSFYLECFTLSLEEWVAQRVIFTLRLGQNLCVQPSTASFLLPVDLPGIEALKAEAIRADSEIIDLVTCDPEY LEITLRGSWLSDGSEDADGVFVTHMSDRTEFFLHKLWHAAQACASVMSE
Sequences:
>Translated_129_residues MLKLTYTENSFYLECFTLSLEEWVAQRVIFTLRLGQNLCVQPSTASFLLPVDLPGIEALKAEAIRADSEIIDLVTCDPEY LEITLRGSWLSDGSEDADGVFVTHMSDRTEFFLHKLWHAAQACASVMSE >Mature_129_residues MLKLTYTENSFYLECFTLSLEEWVAQRVIFTLRLGQNLCVQPSTASFLLPVDLPGIEALKAEAIRADSEIIDLVTCDPEY LEITLRGSWLSDGSEDADGVFVTHMSDRTEFFLHKLWHAAQACASVMSE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14523; Mature: 14523
Theoretical pI: Translated: 4.13; Mature: 4.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.1 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 3.1 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKLTYTENSFYLECFTLSLEEWVAQRVIFTLRLGQNLCVQPSTASFLLPVDLPGIEALK CEEEEEECCCEEEEEEEECHHHHHHHHHHHHEECCCCEEECCCCCCEEEEECCCCHHHHH AEAIRADSEIIDLVTCDPEYLEITLRGSWLSDGSEDADGVFVTHMSDRTEFFLHKLWHAA HHHHCCCCCEEEEEECCCCEEEEEEECCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHH QACASVMSE HHHHHHHCC >Mature Secondary Structure MLKLTYTENSFYLECFTLSLEEWVAQRVIFTLRLGQNLCVQPSTASFLLPVDLPGIEALK CEEEEEECCCEEEEEEEECHHHHHHHHHHHHEECCCCEEECCCCCCEEEEECCCCHHHHH AEAIRADSEIIDLVTCDPEYLEITLRGSWLSDGSEDADGVFVTHMSDRTEFFLHKLWHAA HHHHCCCCCEEEEEECCCCEEEEEEECCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHH QACASVMSE HHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA