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The map label for this gene is 17228351

Identifier: 17228351

GI number: 17228351

Start: 983425

End: 983970

Strand: Direct

Name: 17228351

Synonym: alr0856

Alternate gene names: NA

Gene position: 983425-983970 (Clockwise)

Preceding gene: 17228350

Following gene: 17228352

Centisome position: 15.33

GC content: 46.7

Gene sequence:

>546_bases
GTGGCTATCACAATACCAGTGTTAGAGCAATCTGTGGTGGTATTTTCGCAAAATTACTTGCCACTGTGTCGGGTCAATAT
CAAACGGGCGATCGTCCTGTTATTAACAAACAAAGCTGAACCATTAGTTGGTTATACAGAAAATGGGTGGCGAGTCCATT
CACCTAGTTTGATAATTGATGTACCAAAACATATCCGCTTAAAAATCACCTCTGTTGAGAGGACATGGAAAGTTCCGCCT
GTGAATCGGCGAGAAATTTTGCGGCGAGATCATCACAGTTGTCAATATTGCGGTAGCAGGAAGCATCTCACCTTAGATCA
TGTGATTCCCCGGTCTAGAGGTGGTTCTCACACTTGGGATAACGTGGTTGCGGCTTGTGAAAGATGTAACTCGCGTAAGG
GAGACCGAACACCGGCAGAAGTTGGTATGCAGTTGCGTACTAAGCCAAAACCACCAGTCCACCCGGCAGTAGCTTTTGCA
GTCAGCGACGCTTGGCGTGATAGCGCCACACAGTTTTGGATAGATATGCAGGCAAACCTGGAGTAA

Upstream 100 bases:

>100_bases
GATATGCTGTACCAAAATAAGACCAAAAATCTGACGGTCTATTTCTCACCCCCGCTTCACCCAAACCAGAAGCGGGGGTT
TTTTATTAAGGAGTGAAGCT

Downstream 100 bases:

>100_bases
CAGGAGAGCAGAAGGAATGCTGAAATTAACTTACACAGAGAACAGCTTTTATTTGGAATGTTTCACATTGTCTTTGGAGG
AATGGGTAGCGCAACGAGTA

Product: hypothetical protein

Products: NA

Alternate protein names: HNH Endonuclease Family Protein; Endonuclease; HNH Endonuclease Domain-Containing Protein; Restriction Endonuclease; HNH Endonuclease Domain Protein; HNH Nuclease; Hnh Endonuclease; McrA/HNH Family Nuclease; 5-Methylcytosine-Specific Restriction A; 5-Methylcytosine-Specific Restriction Protein; Nuclease; Restriction Endonuclease McrA/HNH Family; HNH EndonucleaseHNH Nuclease; HNH Family Endonuclease; LOW QUALITY PROTEIN Endonuclease; Hnh Endonuclease Domain Protein; 5-Methylcytosine-Specific Restriction Protein A

Number of amino acids: Translated: 181; Mature: 180

Protein sequence:

>181_residues
MAITIPVLEQSVVVFSQNYLPLCRVNIKRAIVLLLTNKAEPLVGYTENGWRVHSPSLIIDVPKHIRLKITSVERTWKVPP
VNRREILRRDHHSCQYCGSRKHLTLDHVIPRSRGGSHTWDNVVAACERCNSRKGDRTPAEVGMQLRTKPKPPVHPAVAFA
VSDAWRDSATQFWIDMQANLE

Sequences:

>Translated_181_residues
MAITIPVLEQSVVVFSQNYLPLCRVNIKRAIVLLLTNKAEPLVGYTENGWRVHSPSLIIDVPKHIRLKITSVERTWKVPP
VNRREILRRDHHSCQYCGSRKHLTLDHVIPRSRGGSHTWDNVVAACERCNSRKGDRTPAEVGMQLRTKPKPPVHPAVAFA
VSDAWRDSATQFWIDMQANLE
>Mature_180_residues
AITIPVLEQSVVVFSQNYLPLCRVNIKRAIVLLLTNKAEPLVGYTENGWRVHSPSLIIDVPKHIRLKITSVERTWKVPPV
NRREILRRDHHSCQYCGSRKHLTLDHVIPRSRGGSHTWDNVVAACERCNSRKGDRTPAEVGMQLRTKPKPPVHPAVAFAV
SDAWRDSATQFWIDMQANLE

Specific function: Unknown

COG id: COG1403

COG function: function code V; Restriction endonuclease

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20614; Mature: 20483

Theoretical pI: Translated: 10.30; Mature: 10.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAITIPVLEQSVVVFSQNYLPLCRVNIKRAIVLLLTNKAEPLVGYTENGWRVHSPSLIID
CEEEECCCCCEEEEEECCCCCEEEECCCEEEEEEEECCCCCCEEECCCCEEEECCEEEEE
VPKHIRLKITSVERTWKVPPVNRREILRRDHHSCQYCGSRKHLTLDHVIPRSRGGSHTWD
CCCCEEEEEEEECEEECCCCCCHHHHHHHCCCCHHHCCCCCCEEHHHCCCCCCCCCCCHH
NVVAACERCNSRKGDRTPAEVGMQLRTKPKPPVHPAVAFAVSDAWRDSATQFWIDMQANL
HHHHHHHHHCCCCCCCCHHHCCEEEECCCCCCCCHHHHEEHHHHHCCCCEEEEEEEEECC
E
C
>Mature Secondary Structure 
AITIPVLEQSVVVFSQNYLPLCRVNIKRAIVLLLTNKAEPLVGYTENGWRVHSPSLIID
EEEECCCCCEEEEEECCCCCEEEECCCEEEEEEEECCCCCCEEECCCCEEEECCEEEEE
VPKHIRLKITSVERTWKVPPVNRREILRRDHHSCQYCGSRKHLTLDHVIPRSRGGSHTWD
CCCCEEEEEEEECEEECCCCCCHHHHHHHCCCCHHHCCCCCCEEHHHCCCCCCCCCCCHH
NVVAACERCNSRKGDRTPAEVGMQLRTKPKPPVHPAVAFAVSDAWRDSATQFWIDMQANL
HHHHHHHHHCCCCCCCCHHHCCEEEECCCCCCCCHHHHEEHHHHHCCCCEEEEEEEEECC
E
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA