Definition | Ureaplasma parvum serovar 3 str. ATCC 27815 chromosome, complete genome. |
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Accession | NC_010503 |
Length | 751,679 |
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The map label for this gene is 170762352
Identifier: 170762352
GI number: 170762352
Start: 172250
End: 173056
Strand: Reverse
Name: 170762352
Synonym: UPA3_0137
Alternate gene names: NA
Gene position: 173056-172250 (Counterclockwise)
Preceding gene: 170761987
Following gene: 170762393
Centisome position: 23.02
GC content: 25.65
Gene sequence:
>807_bases ATGAATCAAATTAAAATGAATAAAAGCTTTGCTGAATTCAGCAAACTTCCAAAAATTAAACAAGTCTTTACGCCTTGATT TATAGCAGCATTAGTTATATTTATAGTAGGATTAACAATAGCGTTTACAATGGTTGGTTTATTAAATGAAGGTTTTGAAA ATGCAAGAGCATTAGTTAATGATCAAGGTCAAATTATTGGTAAAGTAGCTGATGTTAGTGGTGATAATCATTCTTTAATG TCATGATTAGGTTATGATCAACACGCTAATTATCAAGAATTGTATAAAACAATTCACGATCAATTGATTAATGGAAAAAC AATGGAGTCATTAATTAATAATACTAATAAAAATAACGATCCAAAATTATATGAAGCTCTTCATTATCATGCGCATAGTA AATTTATTAATCATAATGGAACATGAGGATTTGTAACAAAAGTATTAAGTGATTGAGAAAATAGTTGATTTTACAAATAT AATCAATTATTCTCACAATTAGCTAACTCACAAAATCCTGTATTAGCAGCTCAAGGAATAAAATCTCTTGCAAAATTATC AACCATTATACAATATCAAAATCCAAATTATATTGCATATAATTGAGTATTTATTGTATTTATGATGCCACAAATGATTA CTTTTATAATTATTGTTGTTAAACTAGCGACTGTATTTTCACCTAAAAAAAGTGCTGAAGAAAAACAAGCTTATAAACTT GCAAAACTTGAAGTTAAAAATCAAAAAAAGGCTAAAAAATTAAATAATTCTTTACAACAAATAAATTTAAATTTAGAGGC AAACTAG
Upstream 100 bases:
>100_bases ATGCTTTATTAGCTTCTAAAGTTTATAAATATCGTAAGCCAAAAGATTTAGCAAGTTTTAATATGAATAAAGGACCAAGT GGTTTCACTTATCTTAAATA
Downstream 100 bases:
>100_bases TATGTCTTTAGATGCAATGAAACGAAAAATTAACTCAGTTCAAACAACTGCTAAGATTACGAATGCAATGAAACTAGTGG CAACTGCAAAATTAAAACGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 268; Mature: 268
Protein sequence:
>268_residues MNQIKMNKSFAEFSKLPKIKQVFTPWFIAALVIFIVGLTIAFTMVGLLNEGFENARALVNDQGQIIGKVADVSGDNHSLM SWLGYDQHANYQELYKTIHDQLINGKTMESLINNTNKNNDPKLYEALHYHAHSKFINHNGTWGFVTKVLSDWENSWFYKY NQLFSQLANSQNPVLAAQGIKSLAKLSTIIQYQNPNYIAYNWVFIVFMMPQMITFIIIVVKLATVFSPKKSAEEKQAYKL AKLEVKNQKKAKKLNNSLQQINLNLEAN
Sequences:
>Translated_268_residues MNQIKMNKSFAEFSKLPKIKQVFTP*FIAALVIFIVGLTIAFTMVGLLNEGFENARALVNDQGQIIGKVADVSGDNHSLM S*LGYDQHANYQELYKTIHDQLINGKTMESLINNTNKNNDPKLYEALHYHAHSKFINHNGT*GFVTKVLSD*ENS*FYKY NQLFSQLANSQNPVLAAQGIKSLAKLSTIIQYQNPNYIAYN*VFIVFMMPQMITFIIIVVKLATVFSPKKSAEEKQAYKL AKLEVKNQKKAKKLNNSLQQINLNLEAN >Mature_268_residues MNQIKMNKSFAEFSKLPKIKQVFTP*FIAALVIFIVGLTIAFTMVGLLNEGFENARALVNDQGQIIGKVADVSGDNHSLM S*LGYDQHANYQELYKTIHDQLINGKTMESLINNTNKNNDPKLYEALHYHAHSKFINHNGT*GFVTKVLSD*ENS*FYKY NQLFSQLANSQNPVLAAQGIKSLAKLSTIIQYQNPNYIAYN*VFIVFMMPQMITFIIIVVKLATVFSPKKSAEEKQAYKL AKLEVKNQKKAKKLNNSLQQINLNLEAN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29462; Mature: 29462
Theoretical pI: Translated: 9.97; Mature: 9.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNQIKMNKSFAEFSKLPKIKQVFTPFIAALVIFIVGLTIAFTMVGLLNEGFENARALVND CCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC QGQIIGKVADVSGDNHSLMSLGYDQHANYQELYKTIHDQLINGKTMESLINNTNKNNDPK CCHHHHHHHHCCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCHH LYEALHYHAHSKFINHNGTGFVTKVLSDENSFYKYNQLFSQLANSQNPVLAAQGIKSLAK HHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHH LSTIIQYQNPNYIAYNVFIVFMMPQMITFIIIVVKLATVFSPKKSAEEKQAYKLAKLEVK HHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH NQKKAKKLNNSLQQINLNLEAN HHHHHHHHHHHHHHEEEEEECC >Mature Secondary Structure MNQIKMNKSFAEFSKLPKIKQVFTPFIAALVIFIVGLTIAFTMVGLLNEGFENARALVND CCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC QGQIIGKVADVSGDNHSLMSLGYDQHANYQELYKTIHDQLINGKTMESLINNTNKNNDPK CCHHHHHHHHCCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCHH LYEALHYHAHSKFINHNGTGFVTKVLSDENSFYKYNQLFSQLANSQNPVLAAQGIKSLAK HHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHH LSTIIQYQNPNYIAYNVFIVFMMPQMITFIIIVVKLATVFSPKKSAEEKQAYKLAKLEVK HHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH NQKKAKKLNNSLQQINLNLEAN HHHHHHHHHHHHHHEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11048724 [H]