Definition | Ureaplasma parvum serovar 3 str. ATCC 27815 chromosome, complete genome. |
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Accession | NC_010503 |
Length | 751,679 |
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The map label for this gene is 170762247
Identifier: 170762247
GI number: 170762247
Start: 47879
End: 50227
Strand: Direct
Name: 170762247
Synonym: UPA3_0043
Alternate gene names: NA
Gene position: 47879-50227 (Clockwise)
Preceding gene: 170761997
Following gene: 170761994
Centisome position: 6.37
GC content: 31.08
Gene sequence:
>2349_bases ATGAAATTTATTAAACGTAAAACAAAATTATTAACGATTACAATTGGTGCAGTTGCTGTTAGTTCAATCTTATTAGGAGG AATTTTTTATGGTACAAGTCAAAAAAGTCCCTCAAGTTTTGGTATTGCTTCTATTGATCAAAAAGAAAATTTTATTAATA AAGACAATTTAGATTACCAAAAAGCAAGACCATCAATTAAAGATAGTAACTTAAAAGAAATTCCCAAACCTAAACCTCAA CCAAAACCTAAGCCTCAACCAACTCCATTTCCAGATCCCATCCCAACACCTCCAAAAAAAGAAGAGCTAAAAAAACCAGA TATTAAACCAGAAGAACCTAAAAAACCTGAAATTAAACCAGAACCAAAACCTGAGCCTATTCCTCAACCAGCCCCTCCTA TTGAAACAAAACCAAAAGAAGAATTATTACCACCCAACCCTCCGCCTCCAAAAGAAGAACCAAAACCAGAACCAAATCCG CAACCACAGCCACAACAGGTTCCAAACAATAGTAATTCACGAATTATAGAAATTAATGGTGTAAGAGTGGAAGCTGAAGT TGAAGTCCCTCCCCCTCGTGATATTGCTGAATATGATAAACAAAATAATCTGGTTAACCCTAATCCATACATTAATGATA GTGTTGGTAAAATTAAAAACGTAAAGGTTACCGATGAATTGCGAAAAGCAACAGGTAAATTGGTCCAAGGAAATTTAGGA CGTTGAGATTACAAACATTTAATTAATGATTTATTAACTCTTAAACCAGAGGAAATAGAAAAATATGTAAAAAACGATAA AAGCGGTTATTATGCAAAAGTTTGATATCGTTTTTCAAGATTATTTGAATCTGAAAATGTTGTTAATTTTTTAACTGAAC AAGGTAAAAAAGAATATCCTGAAATGAAGTCTAAATTTGTTTCAAAAGACCATAAATATGCATGGCTTTATCAACATTTA GACTTAACAAAGTTTACACAATTATCAAATGAATCAGAATCTTATTTAAAAGAAGGCTATACACCTGATCCTGATAATGC ATATGTTGATGAAAATGGAAAAATTAGTTCTCACGCATATTCACCTGCCAAAGGTTATAATTCGGTAACAAGTCGAATGG AAAATGATAATTGAAATCGGCGTGTTTTCGGTTATAAAAGTTGGTATGGACGTACTCCTGGAAATTTAGTTGAAGGTAAT TATCCTGGTTGAAAGAAAACAAATGTAACCCAAGAATTCCATCAATATGGCGTTAGCGATGGTGATGGAATTACAGTTAA TAAATTAACTCGTGAAAAAACTGAAGATGGTCGTTTAAATGAAGGATATGTTATTGATATTGATGCTGATAATCCACAAG GTTATGAAAAAACAAAAAAATTAATTCAAACTTTAAAAGAAAAAAATATCAATATCACAGGGTATAGAATTCATAATATG GGGAAATCAGATTCAAGTCAAAAATTTGTTGATATTCTAAAAACATTACCAAATCAATTGCCTTTATTAGAATTGTTTTT CTCCGCTGGTTCGCATAATACCTCTTCATTAATCGCACTGAAGGATAAAAAAATTAAAGAATTAGGTTTGTTCACACTAG GAAATTCATTATTAGATGAATGATCAATTAATCCTAATGCCTTACGAAATGTTGAATGAATTAATTCAAACGATTATAAT GTTTCATTTAATTATAAACAAGGTGCAGATATCGCTACTCGTATTACTTTTGATACTTTAGCTTTTGATGAAAGTGATTA TAATGACAATGCATCTGACATTAAATCAAAATTAAAACAAATTAATGATGGTTTACGAATGGTTTATTGAACAAGAAATA ATGAACCAATTTTTCAGGGTAGTTTTGGACCTGGTTTAGATCCTGACCACAAAGAATCAGGCAACAGTTATCCACAAGGA TTAGATTTTAGTCGTGTCCCTCAAATTCGCTCATTACGGGGTTTAATATTTAAAGATGAACAAAAAACATCAAATAATAA AGATCGTAAATTACGAAGAATTAATTTTTACAATAACAGCACAACTTATAAAATGTCTATTGAGGACTTAAATGAAGCCG GATTTAACGAACATATTGTAAGTGGTGAACCTGGTGAAAAAAGTAAAATTACTTTTAGCAATGGTTCTGGTACAACTAAA ATCCAAATTGATGGTGATCAAGAATTGTCAGCAAATGGAATTAGTAACTTATCAGCAATGTTTAATTTTGCTGAAAGTTT ACAACGGACAATTGTTGTAAATAATACCAACTCACCACTTGCAAATCAACTAAGAAATGCGGGATATAGTGTTGAATCAA CAACTAACGCTGGACTAATAGATATTTAA
Upstream 100 bases:
>100_bases ATTAAAACAGCATTATTTCCAAATGGTTTTGACCAATATGATGAAAAGTTTAAATTTAATAACAATCAAAGTAAATAAAG GTTAGGTTTAAATAATAAAA
Downstream 100 bases:
>100_bases TCTTTATTTAAAAATTTTGGACAAAAATGTATGAAAAAAAATAAGTTAACTACTCTCGCTTTAATATTACCAATTACAAT TTTAACTCCTATTGTTATTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 782; Mature: 782
Protein sequence:
>782_residues MKFIKRKTKLLTITIGAVAVSSILLGGIFYGTSQKSPSSFGIASIDQKENFINKDNLDYQKARPSIKDSNLKEIPKPKPQ PKPKPQPTPFPDPIPTPPKKEELKKPDIKPEEPKKPEIKPEPKPEPIPQPAPPIETKPKEELLPPNPPPPKEEPKPEPNP QPQPQQVPNNSNSRIIEINGVRVEAEVEVPPPRDIAEYDKQNNLVNPNPYINDSVGKIKNVKVTDELRKATGKLVQGNLG RWDYKHLINDLLTLKPEEIEKYVKNDKSGYYAKVWYRFSRLFESENVVNFLTEQGKKEYPEMKSKFVSKDHKYAWLYQHL DLTKFTQLSNESESYLKEGYTPDPDNAYVDENGKISSHAYSPAKGYNSVTSRMENDNWNRRVFGYKSWYGRTPGNLVEGN YPGWKKTNVTQEFHQYGVSDGDGITVNKLTREKTEDGRLNEGYVIDIDADNPQGYEKTKKLIQTLKEKNINITGYRIHNM GKSDSSQKFVDILKTLPNQLPLLELFFSAGSHNTSSLIALKDKKIKELGLFTLGNSLLDEWSINPNALRNVEWINSNDYN VSFNYKQGADIATRITFDTLAFDESDYNDNASDIKSKLKQINDGLRMVYWTRNNEPIFQGSFGPGLDPDHKESGNSYPQG LDFSRVPQIRSLRGLIFKDEQKTSNNKDRKLRRINFYNNSTTYKMSIEDLNEAGFNEHIVSGEPGEKSKITFSNGSGTTK IQIDGDQELSANGISNLSAMFNFAESLQRTIVVNNTNSPLANQLRNAGYSVESTTNAGLIDI
Sequences:
>Translated_782_residues MKFIKRKTKLLTITIGAVAVSSILLGGIFYGTSQKSPSSFGIASIDQKENFINKDNLDYQKARPSIKDSNLKEIPKPKPQ PKPKPQPTPFPDPIPTPPKKEELKKPDIKPEEPKKPEIKPEPKPEPIPQPAPPIETKPKEELLPPNPPPPKEEPKPEPNP QPQPQQVPNNSNSRIIEINGVRVEAEVEVPPPRDIAEYDKQNNLVNPNPYINDSVGKIKNVKVTDELRKATGKLVQGNLG R*DYKHLINDLLTLKPEEIEKYVKNDKSGYYAKV*YRFSRLFESENVVNFLTEQGKKEYPEMKSKFVSKDHKYAWLYQHL DLTKFTQLSNESESYLKEGYTPDPDNAYVDENGKISSHAYSPAKGYNSVTSRMENDN*NRRVFGYKSWYGRTPGNLVEGN YPG*KKTNVTQEFHQYGVSDGDGITVNKLTREKTEDGRLNEGYVIDIDADNPQGYEKTKKLIQTLKEKNINITGYRIHNM GKSDSSQKFVDILKTLPNQLPLLELFFSAGSHNTSSLIALKDKKIKELGLFTLGNSLLDE*SINPNALRNVE*INSNDYN VSFNYKQGADIATRITFDTLAFDESDYNDNASDIKSKLKQINDGLRMVY*TRNNEPIFQGSFGPGLDPDHKESGNSYPQG LDFSRVPQIRSLRGLIFKDEQKTSNNKDRKLRRINFYNNSTTYKMSIEDLNEAGFNEHIVSGEPGEKSKITFSNGSGTTK IQIDGDQELSANGISNLSAMFNFAESLQRTIVVNNTNSPLANQLRNAGYSVESTTNAGLIDI >Mature_782_residues MKFIKRKTKLLTITIGAVAVSSILLGGIFYGTSQKSPSSFGIASIDQKENFINKDNLDYQKARPSIKDSNLKEIPKPKPQ PKPKPQPTPFPDPIPTPPKKEELKKPDIKPEEPKKPEIKPEPKPEPIPQPAPPIETKPKEELLPPNPPPPKEEPKPEPNP QPQPQQVPNNSNSRIIEINGVRVEAEVEVPPPRDIAEYDKQNNLVNPNPYINDSVGKIKNVKVTDELRKATGKLVQGNLG R*DYKHLINDLLTLKPEEIEKYVKNDKSGYYAKV*YRFSRLFESENVVNFLTEQGKKEYPEMKSKFVSKDHKYAWLYQHL DLTKFTQLSNESESYLKEGYTPDPDNAYVDENGKISSHAYSPAKGYNSVTSRMENDN*NRRVFGYKSWYGRTPGNLVEGN YPG*KKTNVTQEFHQYGVSDGDGITVNKLTREKTEDGRLNEGYVIDIDADNPQGYEKTKKLIQTLKEKNINITGYRIHNM GKSDSSQKFVDILKTLPNQLPLLELFFSAGSHNTSSLIALKDKKIKELGLFTLGNSLLDE*SINPNALRNVE*INSNDYN VSFNYKQGADIATRITFDTLAFDESDYNDNASDIKSKLKQINDGLRMVY*TRNNEPIFQGSFGPGLDPDHKESGNSYPQG LDFSRVPQIRSLRGLIFKDEQKTSNNKDRKLRRINFYNNSTTYKMSIEDLNEAGFNEHIVSGEPGEKSKITFSNGSGTTK IQIDGDQELSANGISNLSAMFNFAESLQRTIVVNNTNSPLANQLRNAGYSVESTTNAGLIDI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To U.parvum UU046 [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 87118; Mature: 87118
Theoretical pI: Translated: 8.96; Mature: 8.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 0.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKFIKRKTKLLTITIGAVAVSSILLGGIFYGTSQKSPSSFGIASIDQKENFINKDNLDYQ CCCHHCCCEEEEEEHHHHHHHHHHHHHHHCCCCCCCCCCCCCEECCHHHHCCCCCCCCHH KARPSIKDSNLKEIPKPKPQPKPKPQPTPFPDPIPTPPKKEELKKPDIKPEEPKKPEIKP HCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCC EPKPEPIPQPAPPIETKPKEELLPPNPPPPKEEPKPEPNPQPQPQQVPNNSNSRIIEING CCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEC VRVEAEVEVPPPRDIAEYDKQNNLVNPNPYINDSVGKIKNVKVTDELRKATGKLVQGNLG EEEEEEECCCCCCCHHHHHHCCCCCCCCCCCCCCCCCEECCCHHHHHHHHHHHHEECCCC RDYKHLINDLLTLKPEEIEKYVKNDKSGYYAKVYRFSRLFESENVVNFLTEQGKKEYPEM CHHHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHH KSKFVSKDHKYAWLYQHLDLTKFTQLSNESESYLKEGYTPDPDNAYVDENGKISSHAYSP HHHHHCCCCCEEEEEHHCCHHHHHHHCCCHHHHHHCCCCCCCCCCEECCCCCCCCCCCCC AKGYNSVTSRMENDNNRRVFGYKSWYGRTPGNLVEGNYPGKKTNVTQEFHQYGVSDGDGI CCCHHHHHHHHCCCCCCEEEEEHHHCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCE TVNKLTREKTEDGRLNEGYVIDIDADNPQGYEKTKKLIQTLKEKNINITGYRIHNMGKSD EEEHHHHHCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCC SSQKFVDILKTLPNQLPLLELFFSAGSHNTSSLIALKDKKIKELGLFTLGNSLLDESINP CHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHCHHHHHCCCCC NALRNVEINSNDYNVSFNYKQGADIATRITFDTLAFDESDYNDNASDIKSKLKQINDGLR CCEEEEEECCCCEEEEEECCCCCCEEEEEEEHHEECCCCCCCCCHHHHHHHHHHHCCCEE MVYTRNNEPIFQGSFGPGLDPDHKESGNSYPQGLDFSRVPQIRSLRGLIFKDEQKTSNNK EEEECCCCCEEECCCCCCCCCCCCCCCCCCCCCCCHHHCCHHHHHHCCEEECCHHCCCCH DRKLRRINFYNNSTTYKMSIEDLNEAGFNEHIVSGEPGEKSKITFSNGSGTTKIQIDGDQ HCEEEEEEEECCCEEEEEEHHHHHHCCCCCCCCCCCCCCCCEEEEECCCCEEEEEECCCC ELSANGISNLSAMFNFAESLQRTIVVNNTNSPLANQLRNAGYSVESTTNAGLIDI CCCCCCHHHHHHHHHHHHHHCEEEEEECCCCHHHHHHHHCCCCEECCCCCCCCCC >Mature Secondary Structure MKFIKRKTKLLTITIGAVAVSSILLGGIFYGTSQKSPSSFGIASIDQKENFINKDNLDYQ CCCHHCCCEEEEEEHHHHHHHHHHHHHHHCCCCCCCCCCCCCEECCHHHHCCCCCCCCHH KARPSIKDSNLKEIPKPKPQPKPKPQPTPFPDPIPTPPKKEELKKPDIKPEEPKKPEIKP HCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCC EPKPEPIPQPAPPIETKPKEELLPPNPPPPKEEPKPEPNPQPQPQQVPNNSNSRIIEING CCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEC VRVEAEVEVPPPRDIAEYDKQNNLVNPNPYINDSVGKIKNVKVTDELRKATGKLVQGNLG EEEEEEECCCCCCCHHHHHHCCCCCCCCCCCCCCCCCEECCCHHHHHHHHHHHHEECCCC RDYKHLINDLLTLKPEEIEKYVKNDKSGYYAKVYRFSRLFESENVVNFLTEQGKKEYPEM CHHHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHH KSKFVSKDHKYAWLYQHLDLTKFTQLSNESESYLKEGYTPDPDNAYVDENGKISSHAYSP HHHHHCCCCCEEEEEHHCCHHHHHHHCCCHHHHHHCCCCCCCCCCEECCCCCCCCCCCCC AKGYNSVTSRMENDNNRRVFGYKSWYGRTPGNLVEGNYPGKKTNVTQEFHQYGVSDGDGI CCCHHHHHHHHCCCCCCEEEEEHHHCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCE TVNKLTREKTEDGRLNEGYVIDIDADNPQGYEKTKKLIQTLKEKNINITGYRIHNMGKSD EEEHHHHHCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCC SSQKFVDILKTLPNQLPLLELFFSAGSHNTSSLIALKDKKIKELGLFTLGNSLLDESINP CHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHCHHHHHCCCCC NALRNVEINSNDYNVSFNYKQGADIATRITFDTLAFDESDYNDNASDIKSKLKQINDGLR CCEEEEEECCCCEEEEEECCCCCCEEEEEEEHHEECCCCCCCCCHHHHHHHHHHHCCCEE MVYTRNNEPIFQGSFGPGLDPDHKESGNSYPQGLDFSRVPQIRSLRGLIFKDEQKTSNNK EEEECCCCCEEECCCCCCCCCCCCCCCCCCCCCCCHHHCCHHHHHHCCEEECCHHCCCCH DRKLRRINFYNNSTTYKMSIEDLNEAGFNEHIVSGEPGEKSKITFSNGSGTTKIQIDGDQ HCEEEEEEEECCCEEEEEEHHHHHHCCCCCCCCCCCCCCCCEEEEECCCCEEEEEECCCC ELSANGISNLSAMFNFAESLQRTIVVNNTNSPLANQLRNAGYSVESTTNAGLIDI CCCCCCHHHHHHHHHHHHHHCEEEEEECCCCHHHHHHHHCCCCEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11048724 [H]