Definition Ureaplasma parvum serovar 3 str. ATCC 27815 chromosome, complete genome.
Accession NC_010503
Length 751,679

Click here to switch to the map view.

The map label for this gene is 170762247

Identifier: 170762247

GI number: 170762247

Start: 47879

End: 50227

Strand: Direct

Name: 170762247

Synonym: UPA3_0043

Alternate gene names: NA

Gene position: 47879-50227 (Clockwise)

Preceding gene: 170761997

Following gene: 170761994

Centisome position: 6.37

GC content: 31.08

Gene sequence:

>2349_bases
ATGAAATTTATTAAACGTAAAACAAAATTATTAACGATTACAATTGGTGCAGTTGCTGTTAGTTCAATCTTATTAGGAGG
AATTTTTTATGGTACAAGTCAAAAAAGTCCCTCAAGTTTTGGTATTGCTTCTATTGATCAAAAAGAAAATTTTATTAATA
AAGACAATTTAGATTACCAAAAAGCAAGACCATCAATTAAAGATAGTAACTTAAAAGAAATTCCCAAACCTAAACCTCAA
CCAAAACCTAAGCCTCAACCAACTCCATTTCCAGATCCCATCCCAACACCTCCAAAAAAAGAAGAGCTAAAAAAACCAGA
TATTAAACCAGAAGAACCTAAAAAACCTGAAATTAAACCAGAACCAAAACCTGAGCCTATTCCTCAACCAGCCCCTCCTA
TTGAAACAAAACCAAAAGAAGAATTATTACCACCCAACCCTCCGCCTCCAAAAGAAGAACCAAAACCAGAACCAAATCCG
CAACCACAGCCACAACAGGTTCCAAACAATAGTAATTCACGAATTATAGAAATTAATGGTGTAAGAGTGGAAGCTGAAGT
TGAAGTCCCTCCCCCTCGTGATATTGCTGAATATGATAAACAAAATAATCTGGTTAACCCTAATCCATACATTAATGATA
GTGTTGGTAAAATTAAAAACGTAAAGGTTACCGATGAATTGCGAAAAGCAACAGGTAAATTGGTCCAAGGAAATTTAGGA
CGTTGAGATTACAAACATTTAATTAATGATTTATTAACTCTTAAACCAGAGGAAATAGAAAAATATGTAAAAAACGATAA
AAGCGGTTATTATGCAAAAGTTTGATATCGTTTTTCAAGATTATTTGAATCTGAAAATGTTGTTAATTTTTTAACTGAAC
AAGGTAAAAAAGAATATCCTGAAATGAAGTCTAAATTTGTTTCAAAAGACCATAAATATGCATGGCTTTATCAACATTTA
GACTTAACAAAGTTTACACAATTATCAAATGAATCAGAATCTTATTTAAAAGAAGGCTATACACCTGATCCTGATAATGC
ATATGTTGATGAAAATGGAAAAATTAGTTCTCACGCATATTCACCTGCCAAAGGTTATAATTCGGTAACAAGTCGAATGG
AAAATGATAATTGAAATCGGCGTGTTTTCGGTTATAAAAGTTGGTATGGACGTACTCCTGGAAATTTAGTTGAAGGTAAT
TATCCTGGTTGAAAGAAAACAAATGTAACCCAAGAATTCCATCAATATGGCGTTAGCGATGGTGATGGAATTACAGTTAA
TAAATTAACTCGTGAAAAAACTGAAGATGGTCGTTTAAATGAAGGATATGTTATTGATATTGATGCTGATAATCCACAAG
GTTATGAAAAAACAAAAAAATTAATTCAAACTTTAAAAGAAAAAAATATCAATATCACAGGGTATAGAATTCATAATATG
GGGAAATCAGATTCAAGTCAAAAATTTGTTGATATTCTAAAAACATTACCAAATCAATTGCCTTTATTAGAATTGTTTTT
CTCCGCTGGTTCGCATAATACCTCTTCATTAATCGCACTGAAGGATAAAAAAATTAAAGAATTAGGTTTGTTCACACTAG
GAAATTCATTATTAGATGAATGATCAATTAATCCTAATGCCTTACGAAATGTTGAATGAATTAATTCAAACGATTATAAT
GTTTCATTTAATTATAAACAAGGTGCAGATATCGCTACTCGTATTACTTTTGATACTTTAGCTTTTGATGAAAGTGATTA
TAATGACAATGCATCTGACATTAAATCAAAATTAAAACAAATTAATGATGGTTTACGAATGGTTTATTGAACAAGAAATA
ATGAACCAATTTTTCAGGGTAGTTTTGGACCTGGTTTAGATCCTGACCACAAAGAATCAGGCAACAGTTATCCACAAGGA
TTAGATTTTAGTCGTGTCCCTCAAATTCGCTCATTACGGGGTTTAATATTTAAAGATGAACAAAAAACATCAAATAATAA
AGATCGTAAATTACGAAGAATTAATTTTTACAATAACAGCACAACTTATAAAATGTCTATTGAGGACTTAAATGAAGCCG
GATTTAACGAACATATTGTAAGTGGTGAACCTGGTGAAAAAAGTAAAATTACTTTTAGCAATGGTTCTGGTACAACTAAA
ATCCAAATTGATGGTGATCAAGAATTGTCAGCAAATGGAATTAGTAACTTATCAGCAATGTTTAATTTTGCTGAAAGTTT
ACAACGGACAATTGTTGTAAATAATACCAACTCACCACTTGCAAATCAACTAAGAAATGCGGGATATAGTGTTGAATCAA
CAACTAACGCTGGACTAATAGATATTTAA

Upstream 100 bases:

>100_bases
ATTAAAACAGCATTATTTCCAAATGGTTTTGACCAATATGATGAAAAGTTTAAATTTAATAACAATCAAAGTAAATAAAG
GTTAGGTTTAAATAATAAAA

Downstream 100 bases:

>100_bases
TCTTTATTTAAAAATTTTGGACAAAAATGTATGAAAAAAAATAAGTTAACTACTCTCGCTTTAATATTACCAATTACAAT
TTTAACTCCTATTGTTATTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 782; Mature: 782

Protein sequence:

>782_residues
MKFIKRKTKLLTITIGAVAVSSILLGGIFYGTSQKSPSSFGIASIDQKENFINKDNLDYQKARPSIKDSNLKEIPKPKPQ
PKPKPQPTPFPDPIPTPPKKEELKKPDIKPEEPKKPEIKPEPKPEPIPQPAPPIETKPKEELLPPNPPPPKEEPKPEPNP
QPQPQQVPNNSNSRIIEINGVRVEAEVEVPPPRDIAEYDKQNNLVNPNPYINDSVGKIKNVKVTDELRKATGKLVQGNLG
RWDYKHLINDLLTLKPEEIEKYVKNDKSGYYAKVWYRFSRLFESENVVNFLTEQGKKEYPEMKSKFVSKDHKYAWLYQHL
DLTKFTQLSNESESYLKEGYTPDPDNAYVDENGKISSHAYSPAKGYNSVTSRMENDNWNRRVFGYKSWYGRTPGNLVEGN
YPGWKKTNVTQEFHQYGVSDGDGITVNKLTREKTEDGRLNEGYVIDIDADNPQGYEKTKKLIQTLKEKNINITGYRIHNM
GKSDSSQKFVDILKTLPNQLPLLELFFSAGSHNTSSLIALKDKKIKELGLFTLGNSLLDEWSINPNALRNVEWINSNDYN
VSFNYKQGADIATRITFDTLAFDESDYNDNASDIKSKLKQINDGLRMVYWTRNNEPIFQGSFGPGLDPDHKESGNSYPQG
LDFSRVPQIRSLRGLIFKDEQKTSNNKDRKLRRINFYNNSTTYKMSIEDLNEAGFNEHIVSGEPGEKSKITFSNGSGTTK
IQIDGDQELSANGISNLSAMFNFAESLQRTIVVNNTNSPLANQLRNAGYSVESTTNAGLIDI

Sequences:

>Translated_782_residues
MKFIKRKTKLLTITIGAVAVSSILLGGIFYGTSQKSPSSFGIASIDQKENFINKDNLDYQKARPSIKDSNLKEIPKPKPQ
PKPKPQPTPFPDPIPTPPKKEELKKPDIKPEEPKKPEIKPEPKPEPIPQPAPPIETKPKEELLPPNPPPPKEEPKPEPNP
QPQPQQVPNNSNSRIIEINGVRVEAEVEVPPPRDIAEYDKQNNLVNPNPYINDSVGKIKNVKVTDELRKATGKLVQGNLG
R*DYKHLINDLLTLKPEEIEKYVKNDKSGYYAKV*YRFSRLFESENVVNFLTEQGKKEYPEMKSKFVSKDHKYAWLYQHL
DLTKFTQLSNESESYLKEGYTPDPDNAYVDENGKISSHAYSPAKGYNSVTSRMENDN*NRRVFGYKSWYGRTPGNLVEGN
YPG*KKTNVTQEFHQYGVSDGDGITVNKLTREKTEDGRLNEGYVIDIDADNPQGYEKTKKLIQTLKEKNINITGYRIHNM
GKSDSSQKFVDILKTLPNQLPLLELFFSAGSHNTSSLIALKDKKIKELGLFTLGNSLLDE*SINPNALRNVE*INSNDYN
VSFNYKQGADIATRITFDTLAFDESDYNDNASDIKSKLKQINDGLRMVY*TRNNEPIFQGSFGPGLDPDHKESGNSYPQG
LDFSRVPQIRSLRGLIFKDEQKTSNNKDRKLRRINFYNNSTTYKMSIEDLNEAGFNEHIVSGEPGEKSKITFSNGSGTTK
IQIDGDQELSANGISNLSAMFNFAESLQRTIVVNNTNSPLANQLRNAGYSVESTTNAGLIDI
>Mature_782_residues
MKFIKRKTKLLTITIGAVAVSSILLGGIFYGTSQKSPSSFGIASIDQKENFINKDNLDYQKARPSIKDSNLKEIPKPKPQ
PKPKPQPTPFPDPIPTPPKKEELKKPDIKPEEPKKPEIKPEPKPEPIPQPAPPIETKPKEELLPPNPPPPKEEPKPEPNP
QPQPQQVPNNSNSRIIEINGVRVEAEVEVPPPRDIAEYDKQNNLVNPNPYINDSVGKIKNVKVTDELRKATGKLVQGNLG
R*DYKHLINDLLTLKPEEIEKYVKNDKSGYYAKV*YRFSRLFESENVVNFLTEQGKKEYPEMKSKFVSKDHKYAWLYQHL
DLTKFTQLSNESESYLKEGYTPDPDNAYVDENGKISSHAYSPAKGYNSVTSRMENDN*NRRVFGYKSWYGRTPGNLVEGN
YPG*KKTNVTQEFHQYGVSDGDGITVNKLTREKTEDGRLNEGYVIDIDADNPQGYEKTKKLIQTLKEKNINITGYRIHNM
GKSDSSQKFVDILKTLPNQLPLLELFFSAGSHNTSSLIALKDKKIKELGLFTLGNSLLDE*SINPNALRNVE*INSNDYN
VSFNYKQGADIATRITFDTLAFDESDYNDNASDIKSKLKQINDGLRMVY*TRNNEPIFQGSFGPGLDPDHKESGNSYPQG
LDFSRVPQIRSLRGLIFKDEQKTSNNKDRKLRRINFYNNSTTYKMSIEDLNEAGFNEHIVSGEPGEKSKITFSNGSGTTK
IQIDGDQELSANGISNLSAMFNFAESLQRTIVVNNTNSPLANQLRNAGYSVESTTNAGLIDI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To U.parvum UU046 [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 87118; Mature: 87118

Theoretical pI: Translated: 8.96; Mature: 8.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
0.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKFIKRKTKLLTITIGAVAVSSILLGGIFYGTSQKSPSSFGIASIDQKENFINKDNLDYQ
CCCHHCCCEEEEEEHHHHHHHHHHHHHHHCCCCCCCCCCCCCEECCHHHHCCCCCCCCHH
KARPSIKDSNLKEIPKPKPQPKPKPQPTPFPDPIPTPPKKEELKKPDIKPEEPKKPEIKP
HCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCC
EPKPEPIPQPAPPIETKPKEELLPPNPPPPKEEPKPEPNPQPQPQQVPNNSNSRIIEING
CCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEC
VRVEAEVEVPPPRDIAEYDKQNNLVNPNPYINDSVGKIKNVKVTDELRKATGKLVQGNLG
EEEEEEECCCCCCCHHHHHHCCCCCCCCCCCCCCCCCEECCCHHHHHHHHHHHHEECCCC
RDYKHLINDLLTLKPEEIEKYVKNDKSGYYAKVYRFSRLFESENVVNFLTEQGKKEYPEM
CHHHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHH
KSKFVSKDHKYAWLYQHLDLTKFTQLSNESESYLKEGYTPDPDNAYVDENGKISSHAYSP
HHHHHCCCCCEEEEEHHCCHHHHHHHCCCHHHHHHCCCCCCCCCCEECCCCCCCCCCCCC
AKGYNSVTSRMENDNNRRVFGYKSWYGRTPGNLVEGNYPGKKTNVTQEFHQYGVSDGDGI
CCCHHHHHHHHCCCCCCEEEEEHHHCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCE
TVNKLTREKTEDGRLNEGYVIDIDADNPQGYEKTKKLIQTLKEKNINITGYRIHNMGKSD
EEEHHHHHCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCC
SSQKFVDILKTLPNQLPLLELFFSAGSHNTSSLIALKDKKIKELGLFTLGNSLLDESINP
CHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHCHHHHHCCCCC
NALRNVEINSNDYNVSFNYKQGADIATRITFDTLAFDESDYNDNASDIKSKLKQINDGLR
CCEEEEEECCCCEEEEEECCCCCCEEEEEEEHHEECCCCCCCCCHHHHHHHHHHHCCCEE
MVYTRNNEPIFQGSFGPGLDPDHKESGNSYPQGLDFSRVPQIRSLRGLIFKDEQKTSNNK
EEEECCCCCEEECCCCCCCCCCCCCCCCCCCCCCCHHHCCHHHHHHCCEEECCHHCCCCH
DRKLRRINFYNNSTTYKMSIEDLNEAGFNEHIVSGEPGEKSKITFSNGSGTTKIQIDGDQ
HCEEEEEEEECCCEEEEEEHHHHHHCCCCCCCCCCCCCCCCEEEEECCCCEEEEEECCCC
ELSANGISNLSAMFNFAESLQRTIVVNNTNSPLANQLRNAGYSVESTTNAGLIDI
CCCCCCHHHHHHHHHHHHHHCEEEEEECCCCHHHHHHHHCCCCEECCCCCCCCCC
>Mature Secondary Structure
MKFIKRKTKLLTITIGAVAVSSILLGGIFYGTSQKSPSSFGIASIDQKENFINKDNLDYQ
CCCHHCCCEEEEEEHHHHHHHHHHHHHHHCCCCCCCCCCCCCEECCHHHHCCCCCCCCHH
KARPSIKDSNLKEIPKPKPQPKPKPQPTPFPDPIPTPPKKEELKKPDIKPEEPKKPEIKP
HCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCC
EPKPEPIPQPAPPIETKPKEELLPPNPPPPKEEPKPEPNPQPQPQQVPNNSNSRIIEING
CCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEC
VRVEAEVEVPPPRDIAEYDKQNNLVNPNPYINDSVGKIKNVKVTDELRKATGKLVQGNLG
EEEEEEECCCCCCCHHHHHHCCCCCCCCCCCCCCCCCEECCCHHHHHHHHHHHHEECCCC
RDYKHLINDLLTLKPEEIEKYVKNDKSGYYAKVYRFSRLFESENVVNFLTEQGKKEYPEM
CHHHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHH
KSKFVSKDHKYAWLYQHLDLTKFTQLSNESESYLKEGYTPDPDNAYVDENGKISSHAYSP
HHHHHCCCCCEEEEEHHCCHHHHHHHCCCHHHHHHCCCCCCCCCCEECCCCCCCCCCCCC
AKGYNSVTSRMENDNNRRVFGYKSWYGRTPGNLVEGNYPGKKTNVTQEFHQYGVSDGDGI
CCCHHHHHHHHCCCCCCEEEEEHHHCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCE
TVNKLTREKTEDGRLNEGYVIDIDADNPQGYEKTKKLIQTLKEKNINITGYRIHNMGKSD
EEEHHHHHCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCC
SSQKFVDILKTLPNQLPLLELFFSAGSHNTSSLIALKDKKIKELGLFTLGNSLLDESINP
CHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHCHHHHHCCCCC
NALRNVEINSNDYNVSFNYKQGADIATRITFDTLAFDESDYNDNASDIKSKLKQINDGLR
CCEEEEEECCCCEEEEEECCCCCCEEEEEEEHHEECCCCCCCCCHHHHHHHHHHHCCCEE
MVYTRNNEPIFQGSFGPGLDPDHKESGNSYPQGLDFSRVPQIRSLRGLIFKDEQKTSNNK
EEEECCCCCEEECCCCCCCCCCCCCCCCCCCCCCCHHHCCHHHHHHCCEEECCHHCCCCH
DRKLRRINFYNNSTTYKMSIEDLNEAGFNEHIVSGEPGEKSKITFSNGSGTTKIQIDGDQ
HCEEEEEEEECCCEEEEEEHHHHHHCCCCCCCCCCCCCCCCEEEEECCCCEEEEEECCCC
ELSANGISNLSAMFNFAESLQRTIVVNNTNSPLANQLRNAGYSVESTTNAGLIDI
CCCCCCHHHHHHHHHHHHHHCEEEEEECCCCHHHHHHHHCCCCEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11048724 [H]