Definition | Ureaplasma parvum serovar 3 str. ATCC 27815 chromosome, complete genome. |
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Accession | NC_010503 |
Length | 751,679 |
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The map label for this gene is 170761994
Identifier: 170761994
GI number: 170761994
Start: 50258
End: 52762
Strand: Direct
Name: 170761994
Synonym: UPA3_0044
Alternate gene names: NA
Gene position: 50258-52762 (Clockwise)
Preceding gene: 170762247
Following gene: 170762092
Centisome position: 6.69
GC content: 27.15
Gene sequence:
>2505_bases ATGAAAAAAAATAAGTTAACTACTCTCGCTTTAATATTACCAATTACAATTTTAACTCCTATTGTTATTGCCTCATGTAC AAATAAAACTAAAGTTAAAAAATCATCATCTTTAGATAAGATTGCTTCAAATTTAAAATTAGAGTATTTTAATAACAAAG CTAATACTAAAGCATCAAGTGTGCAAAAAGATGAAATTAAAAAACCACTAAATTTACCAAATGATGTTGTTTTTAGTGTT AAAGACGTTTTTGTTAGTCACAAAGATCAAAGTGTATTAATTGTCAAATACACTTTAAAAAAAGGGAATGAAATTCAAGA GTATACTTATGAAATTAAAGGTTTTAAATCTGTTTATGAAAAAGATAAAATCGTTAATGATTTAAGTCAAGCAAACGAAG ATTTTAAAAAAATTGTTAATAATATCAGGTTAAAAGATACATTTGATTTTAAACTAGCAGCTTTTCCTAATCAAAATTAT GACCAATTATTACCATCACAAATTTATAAAAATTATTATCAAGGTATTGAAATTCAACAACACAAATATCAAAATGAATT AGATATTAAAATTATTAATTTTTTATATCCTGATGGTGATTTTGGTTCGGCAAATAAAAATGGTACTTTAAAATTATCAT TAATGTTAACTGATAAAAAAAATAATCAAGTTTACTATAAACTTTTAGAGGTTTCTGGCTTTAAATCTAATCCCTATGGT GTTGATGAAAATGGAACAATTCCTGGAATTGGTACAGAACGTTTAAAACCTAAAAATCAAGACGATTATTTTTCAAAAAC TCAATTGCAACGTTATGAAATTGATAATGAAGGATATCTTCAAATTTTAAAACGCCAAAATAATGATAAAAATTGAAAAG AGTTGCGCCCTGATTTAAATGCAACTGTTAGTGATATTAAACATTTTGATGAAAAAGCAAAAAACGTGGGTCAAGATTCT TATGAATCTGCTGCTTATAAAGGTTTTACATTACCTGTTTATGAAAGTGATGGCAAAATCAGTGGTTTAGCATTAGCAGG TAAAGATACACCAAAAGGGCCGTCATGAGTTGACGCAATTGGACGTAACCAATGACAAATTGGTGGTTTACCACGAACAT TGCCAAATGAAAAATATCGACAAGAAGCAATGCAAACATTTAGTTTAGGAATTTTAAATAACGATTCGCACAAGAACAAT ACTTATAATAAAACTGCAGGTACAACATGAATTTTAGATTATCAAAAAACAAGTGATAATAAATATCCTACAAAATGATA TTTTGCTACAAATTTACATGTTGCAGATGCGATAAATGAAAATACTTTATCGATTAATTTAATGCGATTAATGGATTCTG CACAAATTAAAACTACTTTTAGATTAAGTAATTTAGATGAGAATATTTATAATTTTGGTTTTCGAAGTAAAGAACATGGC AAAAATCTTTTAAACCATGGACTTAAAAAAATTTTTGATGGCCGTGATTTTTTAAAAACAAAACCGGCTGAATATTTGAT TAATTCACAAAAAGAAAAATATAAAGATGTTGGTAATTTTACAGATTTTGCTGTTTTTGAATTAGATTTTGAAAAATTAG AATTAGTTAATGTTTGAAAAAATTTTTTAGGTGAAAATAATGGGTTAGTAACAAAATATAATAATTACAATCCTCAAGAG TTGGCTAAAGTCATTACAAGTAATTATGCTAATAATAAAAATAACCAGATTAAATTCTTATCTAAATCATATTTAAGTGA TTATTCTAAAATTGATGTTCCTTTAAAATATAGACAAGAAGACGCTAAAACATGATTTAAAAAATACGATGAATTATTTG CATTAGGTTGACCTAATTCAACAGAAGATTTCTTCTTTAAAGCTTATGTTGATGATGACCAATTAAAATACCGTACTCGC GATAATTTTAGTTTATGAACAAATTCTGATTACCGATTTTTTAATAATTTAACTCAACAAGAAGGTGGTCAGCCTGCTTT TCCGCCAGAACGTACTGAACGAGGTAATTATTTATCTTATGCAATTGGATTCCGTAGTTTTATTCAAAAACCTGGAATAG TTGACGCATTTATTGCAGTTCCCCAAATTGGGAATAATTTATACACATCCAGTGATAATAAAAAATATATTAATATGGGA CTAGAGTATTTACCCAAACATTTTGCACCAGCAGGTGGTGCTTCTGGAACAAGTGTACGCAATCAAAAAAATGAATTGGT TGCTATCTATCATGCTAAATATGATTCATCAAAAACAGGTCTAGCTGCTGCTTTTCGATCTGAAGGTTATGATTATCAAG GATTATATGGAAATTATAATTTACCACAATATGATTTAATTTATGGCGGTGGAAAAGATCAAACCGAAAAGAAATCATAC CGAGAAGCGATGAAGGATATATATCAAAATAACAATATTAAAACAGCATTATTTCCTGATGGATTCGATAAGATTCCTGA TGAATTCAAATTTAATAATAATTAA
Upstream 100 bases:
>100_bases TGCAAATCAACTAAGAAATGCGGGATATAGTGTTGAATCAACAACTAACGCTGGACTAATAGATATTTAATCTTTATTTA AAAATTTTGGACAAAAATGT
Downstream 100 bases:
>100_bases AAATAAATTATCTTTAATTGAAAGGATTGTTGGTATATGAAATTTATTAAACGTAAAACAAAATTATTAACGATTACAAT TGGTGCAGTTGCTGTGAGTT
Product: putative lipoprotein
Products: NA
Alternate protein names: Lipoprotein LppD Family; Membrane Lipoprotein; Prolipoprotein
Number of amino acids: Translated: 834; Mature: 834
Protein sequence:
>834_residues MKKNKLTTLALILPITILTPIVIASCTNKTKVKKSSSLDKIASNLKLEYFNNKANTKASSVQKDEIKKPLNLPNDVVFSV KDVFVSHKDQSVLIVKYTLKKGNEIQEYTYEIKGFKSVYEKDKIVNDLSQANEDFKKIVNNIRLKDTFDFKLAAFPNQNY DQLLPSQIYKNYYQGIEIQQHKYQNELDIKIINFLYPDGDFGSANKNGTLKLSLMLTDKKNNQVYYKLLEVSGFKSNPYG VDENGTIPGIGTERLKPKNQDDYFSKTQLQRYEIDNEGYLQILKRQNNDKNWKELRPDLNATVSDIKHFDEKAKNVGQDS YESAAYKGFTLPVYESDGKISGLALAGKDTPKGPSWVDAIGRNQWQIGGLPRTLPNEKYRQEAMQTFSLGILNNDSHKNN TYNKTAGTTWILDYQKTSDNKYPTKWYFATNLHVADAINENTLSINLMRLMDSAQIKTTFRLSNLDENIYNFGFRSKEHG KNLLNHGLKKIFDGRDFLKTKPAEYLINSQKEKYKDVGNFTDFAVFELDFEKLELVNVWKNFLGENNGLVTKYNNYNPQE LAKVITSNYANNKNNQIKFLSKSYLSDYSKIDVPLKYRQEDAKTWFKKYDELFALGWPNSTEDFFFKAYVDDDQLKYRTR DNFSLWTNSDYRFFNNLTQQEGGQPAFPPERTERGNYLSYAIGFRSFIQKPGIVDAFIAVPQIGNNLYTSSDNKKYINMG LEYLPKHFAPAGGASGTSVRNQKNELVAIYHAKYDSSKTGLAAAFRSEGYDYQGLYGNYNLPQYDLIYGGGKDQTEKKSY REAMKDIYQNNNIKTALFPDGFDKIPDEFKFNNN
Sequences:
>Translated_834_residues MKKNKLTTLALILPITILTPIVIASCTNKTKVKKSSSLDKIASNLKLEYFNNKANTKASSVQKDEIKKPLNLPNDVVFSV KDVFVSHKDQSVLIVKYTLKKGNEIQEYTYEIKGFKSVYEKDKIVNDLSQANEDFKKIVNNIRLKDTFDFKLAAFPNQNY DQLLPSQIYKNYYQGIEIQQHKYQNELDIKIINFLYPDGDFGSANKNGTLKLSLMLTDKKNNQVYYKLLEVSGFKSNPYG VDENGTIPGIGTERLKPKNQDDYFSKTQLQRYEIDNEGYLQILKRQNNDKN*KELRPDLNATVSDIKHFDEKAKNVGQDS YESAAYKGFTLPVYESDGKISGLALAGKDTPKGPS*VDAIGRNQ*QIGGLPRTLPNEKYRQEAMQTFSLGILNNDSHKNN TYNKTAGTT*ILDYQKTSDNKYPTK*YFATNLHVADAINENTLSINLMRLMDSAQIKTTFRLSNLDENIYNFGFRSKEHG KNLLNHGLKKIFDGRDFLKTKPAEYLINSQKEKYKDVGNFTDFAVFELDFEKLELVNV*KNFLGENNGLVTKYNNYNPQE LAKVITSNYANNKNNQIKFLSKSYLSDYSKIDVPLKYRQEDAKT*FKKYDELFALG*PNSTEDFFFKAYVDDDQLKYRTR DNFSL*TNSDYRFFNNLTQQEGGQPAFPPERTERGNYLSYAIGFRSFIQKPGIVDAFIAVPQIGNNLYTSSDNKKYINMG LEYLPKHFAPAGGASGTSVRNQKNELVAIYHAKYDSSKTGLAAAFRSEGYDYQGLYGNYNLPQYDLIYGGGKDQTEKKSY REAMKDIYQNNNIKTALFPDGFDKIPDEFKFNNN >Mature_834_residues MKKNKLTTLALILPITILTPIVIASCTNKTKVKKSSSLDKIASNLKLEYFNNKANTKASSVQKDEIKKPLNLPNDVVFSV KDVFVSHKDQSVLIVKYTLKKGNEIQEYTYEIKGFKSVYEKDKIVNDLSQANEDFKKIVNNIRLKDTFDFKLAAFPNQNY DQLLPSQIYKNYYQGIEIQQHKYQNELDIKIINFLYPDGDFGSANKNGTLKLSLMLTDKKNNQVYYKLLEVSGFKSNPYG VDENGTIPGIGTERLKPKNQDDYFSKTQLQRYEIDNEGYLQILKRQNNDKN*KELRPDLNATVSDIKHFDEKAKNVGQDS YESAAYKGFTLPVYESDGKISGLALAGKDTPKGPS*VDAIGRNQ*QIGGLPRTLPNEKYRQEAMQTFSLGILNNDSHKNN TYNKTAGTT*ILDYQKTSDNKYPTK*YFATNLHVADAINENTLSINLMRLMDSAQIKTTFRLSNLDENIYNFGFRSKEHG KNLLNHGLKKIFDGRDFLKTKPAEYLINSQKEKYKDVGNFTDFAVFELDFEKLELVNV*KNFLGENNGLVTKYNNYNPQE LAKVITSNYANNKNNQIKFLSKSYLSDYSKIDVPLKYRQEDAKT*FKKYDELFALG*PNSTEDFFFKAYVDDDQLKYRTR DNFSL*TNSDYRFFNNLTQQEGGQPAFPPERTERGNYLSYAIGFRSFIQKPGIVDAFIAVPQIGNNLYTSSDNKKYINMG LEYLPKHFAPAGGASGTSVRNQKNELVAIYHAKYDSSKTGLAAAFRSEGYDYQGLYGNYNLPQYDLIYGGGKDQTEKKSY REAMKDIYQNNNIKTALFPDGFDKIPDEFKFNNN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 94148; Mature: 94148
Theoretical pI: Translated: 9.43; Mature: 9.43
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.1 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.1 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKNKLTTLALILPITILTPIVIASCTNKTKVKKSSSLDKIASNLKLEYFNNKANTKASS CCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCHHHHHHCCEEEEECCCCCCHHHC VQKDEIKKPLNLPNDVVFSVKDVFVSHKDQSVLIVKYTLKKGNEIQEYTYEIKGFKSVYE CCHHHHHCCCCCCCHHHHHHHHHHHCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHH KDKIVNDLSQANEDFKKIVNNIRLKDTFDFKLAAFPNQNYDQLLPSQIYKNYYQGIEIQQ HHHHHHHHHHHHHHHHHHHHCCCCCEECCEEEEECCCCCHHHHHHHHHHHHHHCCCCEEH HKYQNELDIKIINFLYPDGDFGSANKNGTLKLSLMLTDKKNNQVYYKLLEVSGFKSNPYG HHCCCCCCEEEEEEECCCCCCCCCCCCCEEEEEEEEECCCCCEEEEEEEEECCCCCCCCC VDENGTIPGIGTERLKPKNQDDYFSKTQLQRYEIDNEGYLQILKRQNNDKNKELRPDLNA CCCCCCCCCCCHHCCCCCCCCCHHHHHHHHHEECCCCHHHHHHHHCCCCCCCCCCCCCCH TVSDIKHFDEKAKNVGQDSYESAAYKGFTLPVYESDGKISGLALAGKDTPKGPSVDAIGR HHHHHHHHHHHHHHCCCCHHHHHHHCCCEEEEECCCCCEEEEEEECCCCCCCCCCCCCCC NQQIGGLPRTLPNEKYRQEAMQTFSLGILNNDSHKNNTYNKTAGTTILDYQKTSDNKYPT CCCCCCCCCCCCCHHHHHHHHHHHHEEEECCCCCCCCCCCCCCCCEEEEEECCCCCCCCC KYFATNLHVADAINENTLSINLMRLMDSAQIKTTFRLSNLDENIYNFGFRSKEHGKNLLN HHEEECEEEHHCCCCCEEEEEHHHHHCCCCEEEEEEECCCCHHHHHCCCCCHHHHHHHHH HGLKKIFDGRDFLKTKPAEYLINSQKEKYKDVGNFTDFAVFELDFEKLELVNVKNFLGEN HHHHHHHCCCHHHHCCCHHHHHCCHHHHHHHCCCCCCEEEEEECHHHHHHHHHHHHHCCC NGLVTKYNNYNPQELAKVITSNYANNKNNQIKFLSKSYLSDYSKIDVPLKYRQEDAKTFK CCEEEECCCCCHHHHHHHHHHHCCCCCCCEEEEHHHHHHCCHHHCCCCHHHHHHHHHHHH KYDELFALGPNSTEDFFFKAYVDDDQLKYRTRDNFSLTNSDYRFFNNLTQQEGGQPAFPP HHHHHEEECCCCCCCEEEEEEECCCCEEEEECCCCEECCCCHHHHHHHHHHCCCCCCCCC ERTERGNYLSYAIGFRSFIQKPGIVDAFIAVPQIGNNLYTSSDNKKYINMGLEYLPKHFA CCCCCCCEEEEHHHHHHHHCCCCCHHHHHHHHHCCCCCEECCCCCEEECCCHHHHHHHCC PAGGASGTSVRNQKNELVAIYHAKYDSSKTGLAAAFRSEGYDYQGLYGNYNLPQYDLIYG CCCCCCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHCCCCCCCCCCCCCCCCEEEEEC GGKDQTEKKSYREAMKDIYQNNNIKTALFPDGFDKIPDEFKFNNN CCCCCHHHHHHHHHHHHHHHCCCEEEEECCCCHHHCCCCCCCCCC >Mature Secondary Structure MKKNKLTTLALILPITILTPIVIASCTNKTKVKKSSSLDKIASNLKLEYFNNKANTKASS CCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCHHHHHHCCEEEEECCCCCCHHHC VQKDEIKKPLNLPNDVVFSVKDVFVSHKDQSVLIVKYTLKKGNEIQEYTYEIKGFKSVYE CCHHHHHCCCCCCCHHHHHHHHHHHCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHH KDKIVNDLSQANEDFKKIVNNIRLKDTFDFKLAAFPNQNYDQLLPSQIYKNYYQGIEIQQ HHHHHHHHHHHHHHHHHHHHCCCCCEECCEEEEECCCCCHHHHHHHHHHHHHHCCCCEEH HKYQNELDIKIINFLYPDGDFGSANKNGTLKLSLMLTDKKNNQVYYKLLEVSGFKSNPYG HHCCCCCCEEEEEEECCCCCCCCCCCCCEEEEEEEEECCCCCEEEEEEEEECCCCCCCCC VDENGTIPGIGTERLKPKNQDDYFSKTQLQRYEIDNEGYLQILKRQNNDKNKELRPDLNA CCCCCCCCCCCHHCCCCCCCCCHHHHHHHHHEECCCCHHHHHHHHCCCCCCCCCCCCCCH TVSDIKHFDEKAKNVGQDSYESAAYKGFTLPVYESDGKISGLALAGKDTPKGPSVDAIGR HHHHHHHHHHHHHHCCCCHHHHHHHCCCEEEEECCCCCEEEEEEECCCCCCCCCCCCCCC NQQIGGLPRTLPNEKYRQEAMQTFSLGILNNDSHKNNTYNKTAGTTILDYQKTSDNKYPT CCCCCCCCCCCCCHHHHHHHHHHHHEEEECCCCCCCCCCCCCCCCEEEEEECCCCCCCCC KYFATNLHVADAINENTLSINLMRLMDSAQIKTTFRLSNLDENIYNFGFRSKEHGKNLLN HHEEECEEEHHCCCCCEEEEEHHHHHCCCCEEEEEEECCCCHHHHHCCCCCHHHHHHHHH HGLKKIFDGRDFLKTKPAEYLINSQKEKYKDVGNFTDFAVFELDFEKLELVNVKNFLGEN HHHHHHHCCCHHHHCCCHHHHHCCHHHHHHHCCCCCCEEEEEECHHHHHHHHHHHHHCCC NGLVTKYNNYNPQELAKVITSNYANNKNNQIKFLSKSYLSDYSKIDVPLKYRQEDAKTFK CCEEEECCCCCHHHHHHHHHHHCCCCCCCEEEEHHHHHHCCHHHCCCCHHHHHHHHHHHH KYDELFALGPNSTEDFFFKAYVDDDQLKYRTRDNFSLTNSDYRFFNNLTQQEGGQPAFPP HHHHHEEECCCCCCCEEEEEEECCCCEEEEECCCCEECCCCHHHHHHHHHHCCCCCCCCC ERTERGNYLSYAIGFRSFIQKPGIVDAFIAVPQIGNNLYTSSDNKKYINMGLEYLPKHFA CCCCCCCEEEEHHHHHHHHCCCCCHHHHHHHHHCCCCCEECCCCCEEECCCHHHHHHHCC PAGGASGTSVRNQKNELVAIYHAKYDSSKTGLAAAFRSEGYDYQGLYGNYNLPQYDLIYG CCCCCCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHCCCCCCCCCCCCCCCCEEEEEC GGKDQTEKKSYREAMKDIYQNNNIKTALFPDGFDKIPDEFKFNNN CCCCCHHHHHHHHHHHHHHHCCCEEEEECCCCHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA