Definition Ureaplasma parvum serovar 3 str. ATCC 27815 chromosome, complete genome.
Accession NC_010503
Length 751,679

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The map label for this gene is trxB

Identifier: 170762195

GI number: 170762195

Start: 90973

End: 91902

Strand: Reverse

Name: trxB

Synonym: UPA3_0073

Alternate gene names: 170762195

Gene position: 91902-90973 (Counterclockwise)

Preceding gene: 170762410

Following gene: 170762179

Centisome position: 12.23

GC content: 29.35

Gene sequence:

>930_bases
ATGAATCAAGAAGTTTACGATTTAGTAATCATTGGCGCAGGTCCAGCCGGTTTAGCTGCTGCTGTTTATGCTAAACGTTC
TGGATTAAATGTGATCATTGTTGAAAAACAATTCCCAGGAGGAAAAATAGCATTAACATCAAATGTAGAAAATTATTTAG
GTATCAATAGTATTCCAGGACCTGAATTGGCTTATAAAATGTACGAACAAGTCTTAAATTTAAATGTTTCTATTATTTAT
GAAGCTGCTGATGAAATATCTTTAAAAGAAAAATATAAAAAAATTAAATTAACTACACAAACATTAATTACTAAAACTGT
AATTATTGCAACAGGAACAGAAAATAGACGGTTAAACATTTTAGGTGAATTAGAATTTGAAAACAAGGGAATTAGTTATT
GCGCTATTTGTGATGGACCACTTTATAAAAATAAAGCTGTCTCTGTGATTGGATCTGGTAACTCTGCTGTGGAAGAGGCC
ATATATTTAGCTACAATTGCTAAAGAAGTTCATTTAATTGCCAATAAACCACAATTTAAAGCAGAACAACAATTAGTACA
AATTGCAAATAACACACCTAATATAAAAATTTATTACAATAAACAAACATTCGAATTTTTTGGTCATCAGTTTTTAGAAG
GTTTAAAATTTAGAGATTTAATCACAAACGAAGTAACTACACTAAATATTGAAGCTAATTTCACTTTTATTGGCCTATTG
CCTTCAAGAATTAATACAAATAATTTATGTATTTTTAATGAGGTAAACGGATTTATTACAACTGATAAAAATATGCAAAC
TAGTGTTTGTGGTATTTTTGCAGCCGGTGATATTGTTGATAAAAATGTTCGACAAATTGCGACTGCTACAAATGATGGAG
TCATTGCAGCACTTTATGCCAAAGAGTACATTACAAGAAATAATTGATAA

Upstream 100 bases:

>100_bases
GTTTTATAAAAAGAAAGACCAAATTCATAAATTTGGAGAATTAAGAAAGCCAGAAGAATTTTTATTTTATTGTCATAAAT
AATAAAGAAAAGGATTTTAA

Downstream 100 bases:

>100_bases
TGATTCTAACAAATTCACGTTTAGTGAATTTGTTAAAGAAGATATTTATACTAACACTGATTATTCATCCACAGACTATA
AAGTTATTTTATATTCGTTT

Product: thioredoxin-disulfide reductase

Products: NA

Alternate protein names: TRXR

Number of amino acids: Translated: 309; Mature: 309

Protein sequence:

>309_residues
MNQEVYDLVIIGAGPAGLAAAVYAKRSGLNVIIVEKQFPGGKIALTSNVENYLGINSIPGPELAYKMYEQVLNLNVSIIY
EAADEISLKEKYKKIKLTTQTLITKTVIIATGTENRRLNILGELEFENKGISYCAICDGPLYKNKAVSVIGSGNSAVEEA
IYLATIAKEVHLIANKPQFKAEQQLVQIANNTPNIKIYYNKQTFEFFGHQFLEGLKFRDLITNEVTTLNIEANFTFIGLL
PSRINTNNLCIFNEVNGFITTDKNMQTSVCGIFAAGDIVDKNVRQIATATNDGVIAALYAKEYITRNNW

Sequences:

>Translated_309_residues
MNQEVYDLVIIGAGPAGLAAAVYAKRSGLNVIIVEKQFPGGKIALTSNVENYLGINSIPGPELAYKMYEQVLNLNVSIIY
EAADEISLKEKYKKIKLTTQTLITKTVIIATGTENRRLNILGELEFENKGISYCAICDGPLYKNKAVSVIGSGNSAVEEA
IYLATIAKEVHLIANKPQFKAEQQLVQIANNTPNIKIYYNKQTFEFFGHQFLEGLKFRDLITNEVTTLNIEANFTFIGLL
PSRINTNNLCIFNEVNGFITTDKNMQTSVCGIFAAGDIVDKNVRQIATATNDGVIAALYAKEYITRNN*
>Mature_309_residues
MNQEVYDLVIIGAGPAGLAAAVYAKRSGLNVIIVEKQFPGGKIALTSNVENYLGINSIPGPELAYKMYEQVLNLNVSIIY
EAADEISLKEKYKKIKLTTQTLITKTVIIATGTENRRLNILGELEFENKGISYCAICDGPLYKNKAVSVIGSGNSAVEEA
IYLATIAKEVHLIANKPQFKAEQQLVQIANNTPNIKIYYNKQTFEFFGHQFLEGLKFRDLITNEVTTLNIEANFTFIGLL
PSRINTNNLCIFNEVNGFITTDKNMQTSVCGIFAAGDIVDKNVRQIATATNDGVIAALYAKEYITRNN*

Specific function: Unknown

COG id: COG0492

COG function: function code O; Thioredoxin reductase

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family

Homologues:

Organism=Escherichia coli, GI1787114, Length=312, Percent_Identity=35.5769230769231, Blast_Score=185, Evalue=4e-48,
Organism=Escherichia coli, GI87081763, Length=312, Percent_Identity=36.5384615384615, Blast_Score=166, Evalue=2e-42,
Organism=Saccharomyces cerevisiae, GI6320560, Length=311, Percent_Identity=32.475884244373, Blast_Score=162, Evalue=5e-41,
Organism=Saccharomyces cerevisiae, GI6321898, Length=314, Percent_Identity=31.8471337579618, Blast_Score=159, Evalue=6e-40,

Paralogues:

None

Copy number: 808 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 2,000 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): TRXB_UREPA (Q9PR71)

Other databases:

- EMBL:   AF222894
- RefSeq:   NP_077904.1
- ProteinModelPortal:   Q9PR71
- SMR:   Q9PR71
- GeneID:   876144
- GenomeReviews:   AF222894_GR
- KEGG:   uur:UU074
- HOGENOM:   HBG669726
- OMA:   TNDQMET
- ProtClustDB:   CLSK2298762
- BioCyc:   UURE95667:UU074-MONOMER
- BRENDA:   1.8.1.9
- GO:   GO:0005737
- InterPro:   IPR013027
- InterPro:   IPR008255
- InterPro:   IPR001327
- InterPro:   IPR000103
- PRINTS:   PR00368
- PRINTS:   PR00469

Pfam domain/function: PF00070 Pyr_redox; PF07992 Pyr_redox_2

EC number: =1.8.1.9

Molecular weight: Translated: 33946; Mature: 33946

Theoretical pI: Translated: 6.54; Mature: 6.54

Prosite motif: PS00573 PYRIDINE_REDOX_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNQEVYDLVIIGAGPAGLAAAVYAKRSGLNVIIVEKQFPGGKIALTSNVENYLGINSIPG
CCCCEEEEEEECCCCHHHHHHHHHHCCCCEEEEEEECCCCCEEEEECCCHHHCCCCCCCC
PELAYKMYEQVLNLNVSIIYEAADEISLKEKYKKIKLTTQTLITKTVIIATGTENRRLNI
HHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHEEEEEHHHEEEEEEEEEECCCCCEEEE
LGELEFENKGISYCAICDGPLYKNKAVSVIGSGNSAVEEAIYLATIAKEVHLIANKPQFK
EEEEEECCCCCEEEEEECCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHEEEECCCCHH
AEQQLVQIANNTPNIKIYYNKQTFEFFGHQFLEGLKFRDLITNEVTTLNIEANFTFIGLL
HHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHCCCHHHHHCCCEEEEEEEECEEEEEEE
PSRINTNNLCIFNEVNGFITTDKNMQTSVCGIFAAGDIVDKNVRQIATATNDGVIAALYA
CCCCCCCCEEEEECCCCEEEECCCCCEEEEEEEEECCHHHHHHHHHHCCCCCCEEEEEEE
KEYITRNN
HHHHCCCC
>Mature Secondary Structure
MNQEVYDLVIIGAGPAGLAAAVYAKRSGLNVIIVEKQFPGGKIALTSNVENYLGINSIPG
CCCCEEEEEEECCCCHHHHHHHHHHCCCCEEEEEEECCCCCEEEEECCCHHHCCCCCCCC
PELAYKMYEQVLNLNVSIIYEAADEISLKEKYKKIKLTTQTLITKTVIIATGTENRRLNI
HHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHEEEEEHHHEEEEEEEEEECCCCCEEEE
LGELEFENKGISYCAICDGPLYKNKAVSVIGSGNSAVEEAIYLATIAKEVHLIANKPQFK
EEEEEECCCCCEEEEEECCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHEEEECCCCHH
AEQQLVQIANNTPNIKIYYNKQTFEFFGHQFLEGLKFRDLITNEVTTLNIEANFTFIGLL
HHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHCCCHHHHHCCCEEEEEEEECEEEEEEE
PSRINTNNLCIFNEVNGFITTDKNMQTSVCGIFAAGDIVDKNVRQIATATNDGVIAALYA
CCCCCCCCEEEEECCCCEEEECCCCCEEEEEEEEECCHHHHHHHHHHCCCCCCEEEEEEE
KEYITRNN
HHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11048724