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The map label for this gene is whiA [H]

Identifier: 170762179

GI number: 170762179

Start: 90015

End: 91007

Strand: Reverse

Name: whiA [H]

Synonym: UPA3_0072

Alternate gene names: 170762179

Gene position: 91007-90015 (Counterclockwise)

Preceding gene: 170762195

Following gene: 170762032

Centisome position: 12.11

GC content: 24.17

Gene sequence:

>993_bases
ATGCCAAAGAGTACATTACAAGAAATAATTGATAATGATTCTAACAAATTCACGTTTAGTGAATTTGTTAAAGAAGATAT
TTATACTAACACTGATTATTCATCCACAGACTATAAAGTTATTTTATATTCGTTTTTTCGTAATAATTTAACCATTAAAA
TTGGTCAAAAACTAACTTGAATTATTAAATCTCAAAATTTACAAATTATTGAATTTATTTTAAATGGTTTAGATTATTTT
AATAATTTAAATATTGAATATGAGATTATGTTTGAGCCTGACCATTTAAATAAAACTCGTACTAATTATTCGCTATTACT
TTGAGGTGATTTGGATAAATTAGATGAAATTTTAAAACTATTTGATGATGCGAATAATGAAAATTTTCATAAAGACCGCT
ATTGTTCAAATTTTTTAATTGGTGCAATGTTGTCTGGTGGTTCAATTGCACACCCACTTGAAAACTATCATTTAGAAATT
CGCTGTGATTCAAATAATTACATCCCATTATTAACAAAGGCTTTAGCCCGTTATGGTTTAGAATATAAAATTATTTATCG
TAATAAAAAAACCATTGTTTATTTTAAAAAATCAGAGATAATCAGTGATTTTTTAAAAGCGATCCGTACGCAAAATTCGT
TATTTGAATTTGAGAATATTCGTATCCAACGTGATTTTAATAATCAACAACAACGTTTAAATAATTTAGATATTTCTAAC
CTTTCTAAAAGTTCTAAAGCAGGGGTTTTGACTAAAGAAATGATTTTAGAAATAAAAAAAAACCACGATGAATTTTGCAA
ACAAAGTACTAAATTTTTAAAGTATTGTGAACTACGAGTACAAAATCCAGACTGTTCATTAAATGAACTTTCTTGTTTAT
TAAAACAGATGTTTAATATTGAAATTTCAAAAAGTGGTTTAAATCATTTTAATTCTCGTATTAAAGAAATGTATGAAGAA
TTAAAATTAAAAAAACTAGTTTTTAAAAACTAG

Upstream 100 bases:

>100_bases
CAAACTAGTGTTTGTGGTATTTTTGCAGCCGGTGATATTGTTGATAAAAATGTTCGACAAATTGCGACTGCTACAAATGA
TGGAGTCATTGCAGCACTTT

Downstream 100 bases:

>100_bases
TTTTTTTATCTCATTGTTTAGGATTGATTAATCTTTTTTTCAATTAAAAAGGCAAATTGATTTGTTCTTACATCTTTAAA
AGTTTCAATATACATATTAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 330; Mature: 329

Protein sequence:

>330_residues
MPKSTLQEIIDNDSNKFTFSEFVKEDIYTNTDYSSTDYKVILYSFFRNNLTIKIGQKLTWIIKSQNLQIIEFILNGLDYF
NNLNIEYEIMFEPDHLNKTRTNYSLLLWGDLDKLDEILKLFDDANNENFHKDRYCSNFLIGAMLSGGSIAHPLENYHLEI
RCDSNNYIPLLTKALARYGLEYKIIYRNKKTIVYFKKSEIISDFLKAIRTQNSLFEFENIRIQRDFNNQQQRLNNLDISN
LSKSSKAGVLTKEMILEIKKNHDEFCKQSTKFLKYCELRVQNPDCSLNELSCLLKQMFNIEISKSGLNHFNSRIKEMYEE
LKLKKLVFKN

Sequences:

>Translated_330_residues
MPKSTLQEIIDNDSNKFTFSEFVKEDIYTNTDYSSTDYKVILYSFFRNNLTIKIGQKLT*IIKSQNLQIIEFILNGLDYF
NNLNIEYEIMFEPDHLNKTRTNYSLLL*GDLDKLDEILKLFDDANNENFHKDRYCSNFLIGAMLSGGSIAHPLENYHLEI
RCDSNNYIPLLTKALARYGLEYKIIYRNKKTIVYFKKSEIISDFLKAIRTQNSLFEFENIRIQRDFNNQQQRLNNLDISN
LSKSSKAGVLTKEMILEIKKNHDEFCKQSTKFLKYCELRVQNPDCSLNELSCLLKQMFNIEISKSGLNHFNSRIKEMYEE
LKLKKLVFKN
>Mature_329_residues
PKSTLQEIIDNDSNKFTFSEFVKEDIYTNTDYSSTDYKVILYSFFRNNLTIKIGQKLT*IIKSQNLQIIEFILNGLDYFN
NLNIEYEIMFEPDHLNKTRTNYSLLL*GDLDKLDEILKLFDDANNENFHKDRYCSNFLIGAMLSGGSIAHPLENYHLEIR
CDSNNYIPLLTKALARYGLEYKIIYRNKKTIVYFKKSEIISDFLKAIRTQNSLFEFENIRIQRDFNNQQQRLNNLDISNL
SKSSKAGVLTKEMILEIKKNHDEFCKQSTKFLKYCELRVQNPDCSLNELSCLLKQMFNIEISKSGLNHFNSRIKEMYEEL
KLKKLVFKN

Specific function: May be required for sporulation [H]

COG id: COG1481

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the whiA transcriptional regulatory family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004042
- InterPro:   IPR003802
- InterPro:   IPR023054
- InterPro:   IPR018478 [H]

Pfam domain/function: PF02650 HTH_WhiA; PF10298 WhiA_N [H]

EC number: NA

Molecular weight: Translated: 38664; Mature: 38533

Theoretical pI: Translated: 8.09; Mature: 8.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPKSTLQEIIDNDSNKFTFSEFVKEDIYTNTDYSSTDYKVILYSFFRNNLTIKIGQKLTI
CCHHHHHHHHCCCCCCEEHHHHHHHHHCCCCCCCCCCHHEEEEEHHHCCEEEEECCEEEE
IKSQNLQIIEFILNGLDYFNNLNIEYEIMFEPDHLNKTRTNYSLLLGDLDKLDEILKLFD
EECCCHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCHHHHHCCHHHHHHHHHHHH
DANNENFHKDRYCSNFLIGAMLSGGSIAHPLENYHLEIRCDSNNYIPLLTKALARYGLEY
CCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHCCEE
KIIYRNKKTIVYFKKSEIISDFLKAIRTQNSLFEFENIRIQRDFNNQQQRLNNLDISNLS
EEEEECCEEEEEEEHHHHHHHHHHHHHHHHHHEEECCEEEEECCCHHHHHHHCCCHHHCC
KSSKAGVLTKEMILEIKKNHDEFCKQSTKFLKYCELRVQNPDCSLNELSCLLKQMFNIEI
CCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHCCEE
SKSGLNHFNSRIKEMYEELKLKKLVFKN
CHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
PKSTLQEIIDNDSNKFTFSEFVKEDIYTNTDYSSTDYKVILYSFFRNNLTIKIGQKLTI
CHHHHHHHHCCCCCCEEHHHHHHHHHCCCCCCCCCCHHEEEEEHHHCCEEEEECCEEEE
IKSQNLQIIEFILNGLDYFNNLNIEYEIMFEPDHLNKTRTNYSLLLGDLDKLDEILKLFD
EECCCHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCHHHHHCCHHHHHHHHHHHH
DANNENFHKDRYCSNFLIGAMLSGGSIAHPLENYHLEIRCDSNNYIPLLTKALARYGLEY
CCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHCCEE
KIIYRNKKTIVYFKKSEIISDFLKAIRTQNSLFEFENIRIQRDFNNQQQRLNNLDISNLS
EEEEECCEEEEEEEHHHHHHHHHHHHHHHHHHEEECCEEEEECCCHHHHHHHCCCHHHCC
KSSKAGVLTKEMILEIKKNHDEFCKQSTKFLKYCELRVQNPDCSLNELSCLLKQMFNIEI
CCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHCCEE
SKSGLNHFNSRIKEMYEELKLKKLVFKN
CHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA