Definition | Ureaplasma parvum serovar 3 str. ATCC 27815 chromosome, complete genome. |
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Accession | NC_010503 |
Length | 751,679 |
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The map label for this gene is 170762159
Identifier: 170762159
GI number: 170762159
Start: 44757
End: 45173
Strand: Direct
Name: 170762159
Synonym: UPA3_0041
Alternate gene names: NA
Gene position: 44757-45173 (Clockwise)
Preceding gene: 170762242
Following gene: 170761997
Centisome position: 5.95
GC content: 22.3
Gene sequence:
>417_bases ATGTCTCCAATTAGTATTGAATTAATAATTCAAATAAGTATTGGATTAAGTGCTAGCCTAATTTTATTGTTTGCTTTCTT ACCACAAACACTTTTAACTATTAAAACTAAAAATACTGCTGCATTAACAATTAGTATGTTTATTATTTGTTTTATTGCAC GTTTATGTTTTAGTTTAAGTGCTATTCTAACAATTATCGTCTATATTCATAATCAGAATTATGGTTTATCTTTATATGCG CTTACACTTCCTGTTTTAATATGTCATGGTATTAATATGTTATTAAATTTAATTATTGCTTTTATAAAAATCAATAATGT TTATAAAGCCAAAATCCATAAAATGAATGAGAATGAATATATTATTTTTGCTTATGCTCAAAAATTAAAGGAAAAAGTAT CGATAAAAAATAAATAA
Upstream 100 bases:
>100_bases TAGTTATTTTAATTTATAAAGTTAAAAACATTAAAAAAGCTAAATTATATTTAATGGATGAAAAGACATATTATGAAAAA TATGTCTTAAATAATTTATA
Downstream 100 bases:
>100_bases TTTACACAATAAATTTACATAAATATTTATTTTATTTTTTTAAAAAATTGTTCTTTTTTTTTTTTTTTTTTGCTTTATAA TTAAAAAACATTCAAGTTGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 138; Mature: 137
Protein sequence:
>138_residues MSPISIELIIQISIGLSASLILLFAFLPQTLLTIKTKNTAALTISMFIICFIARLCFSLSAILTIIVYIHNQNYGLSLYA LTLPVLICHGINMLLNLIIAFIKINNVYKAKIHKMNENEYIIFAYAQKLKEKVSIKNK
Sequences:
>Translated_138_residues MSPISIELIIQISIGLSASLILLFAFLPQTLLTIKTKNTAALTISMFIICFIARLCFSLSAILTIIVYIHNQNYGLSLYA LTLPVLICHGINMLLNLIIAFIKINNVYKAKIHKMNENEYIIFAYAQKLKEKVSIKNK >Mature_137_residues SPISIELIIQISIGLSASLILLFAFLPQTLLTIKTKNTAALTISMFIICFIARLCFSLSAILTIIVYIHNQNYGLSLYAL TLPVLICHGINMLLNLIIAFIKINNVYKAKIHKMNENEYIIFAYAQKLKEKVSIKNK
Specific function: Unknown
COG id: COG4095
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential)
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To U.parvum UU007, UU008 and UU041
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y042_UREPA (Q9PRA3)
Other databases:
- EMBL: AF222894 - RefSeq: NP_077872.1 - GeneID: 876379 - GenomeReviews: AF222894_GR - KEGG: uur:UU042 - HOGENOM: HBG734509 - OMA: MNESEYI - ProtClustDB: CLSK2392799 - BioCyc: UURE95667:UU042-MONOMER
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15547; Mature: 15416
Theoretical pI: Translated: 10.00; Mature: 10.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0x1988e284)-; HASH(0x19c8f120)-; HASH(0x18c5ea34)-;
Cys/Met content:
2.2 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSPISIELIIQISIGLSASLILLFAFLPQTLLTIKTKNTAALTISMFIICFIARLCFSLS CCCEEEEEEEEEECCCHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHHHHHHHHH AILTIIVYIHNQNYGLSLYALTLPVLICHGINMLLNLIIAFIKINNVYKAKIHKMNENEY HHHHHHHEEECCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCE IIFAYAQKLKEKVSIKNK EEEHHHHHHHHHHCCCCH >Mature Secondary Structure SPISIELIIQISIGLSASLILLFAFLPQTLLTIKTKNTAALTISMFIICFIARLCFSLS CCEEEEEEEEEECCCHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHHHHHHHHH AILTIIVYIHNQNYGLSLYALTLPVLICHGINMLLNLIIAFIKINNVYKAKIHKMNENEY HHHHHHHEEECCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCE IIFAYAQKLKEKVSIKNK EEEHHHHHHHHHHCCCCH
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11048724