Definition Ureaplasma parvum serovar 3 str. ATCC 27815 chromosome, complete genome.
Accession NC_010503
Length 751,679

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The map label for this gene is 170762047

Identifier: 170762047

GI number: 170762047

Start: 241499

End: 242671

Strand: Direct

Name: 170762047

Synonym: UPA3_0204

Alternate gene names: NA

Gene position: 241499-242671 (Clockwise)

Preceding gene: 170761906

Following gene: 170762278

Centisome position: 32.13

GC content: 26.94

Gene sequence:

>1173_bases
ATGAGGTTAAGATATAAAATCTTATGCGCTAGCTTAGGAGTGGTTGGTGTTGTTGGTGTTATTGCTGCAATATCAATTGA
TTATAAACAAATTCCAATTGTTTATGCAAATGGTAGTTCATCAGTATTACCCTTAATTCAGGCCTTATCTGAAAAACATC
ATAAACAAGATATTATTTCTAATGCTGGAGGTTCTTCGTTAGGAATAATTGAAGCTGTTGAACAAAGAACTAATATAGGC
GTAAGTTCACGTAGTCCAAATATTGATTTTGAGCAACAAAGTGTTGAAAAAAGTCATGTAGTTTATGATAAGTGAAAACA
AAATCAATTGAAAACTTATACAATTGCTTGAGATGGTATAGGCATTATTTATAAACTCAATAAAACTAATCATGAATTAG
TTTTAACAAAAGACAATATTATTAAATTGTTTAAAGCTTTTACTGGGAATGAACAAGTAAGTTATTATGATCTTGATCCC
CAATTACCAAAAACACCAATTTTAGCTTATTCACGCACAGGTGGAGCAAATGCCTCAGGGACAGCCGAGGCTTTTTTGAC
TTCTAATCCATTAATTTCTAAAAAAGAATTTAAAAAAAAATATCATGATATTTATAAGGTTATTGAAGCTGGTACTTATG
GCAAATTAATAAGAAGTACTGAAGAATCGAATACTCAAGCTTGAACAAATATTTCTAAAGATAATGTAGATGGATCAATA
ACTTATTTATCAACAGGTTTTATTCTTAAAAATTATGATCAAATTATTGCTAAAGGATATAAGATTGCTTATTTACAAAA
TAAAGATTTAAAAAATTATTTACCTTTTGAAATTAATGAAAACAAACAAGAAATTGTTAATGTTGCTAAAACTTATGGAT
GATATCGACCTTTTAATTTAGTTTTTAGTTTAAATATGCAAGGAATTAAAAATACTAAAGAATTCGTTTGATGATTATTA
ACCAATAAAAAAGTTGAAAAAATCATTCAAGAATCAGGGTTTATTCCCCTTACTTTTGAACAAAAAAATTCAATGTTCTT
AAAACCTTATAAAGATGAACAATCTTTTCAAGAAGCCATTAACAATCAAAGCGCAAAAAACAATTTTTTTGTAAGTGATT
TTGAATTAATAGAATCAAATAGAATTAATATATTAGGAGCAAAATCAGCATAA

Upstream 100 bases:

>100_bases
AGAAAAACAATAAAATCTTTAATTCTTTGTAATTATTAAAATAATTAAGCTTTTTTTATATAATTTATAAGACTAACATT
TAATAGTAGTTGAGGAATTA

Downstream 100 bases:

>100_bases
TGAGTATTTTAAATCTTAATTCGCAACAGACTAAAAAAATCATTTTTAACAAAAAAATAAAAGATAAACTAGCTAAAACG
TTAGTTATTAGTTTTGCTTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 390; Mature: 390

Protein sequence:

>390_residues
MRLRYKILCASLGVVGVVGVIAAISIDYKQIPIVYANGSSSVLPLIQALSEKHHKQDIISNAGGSSLGIIEAVEQRTNIG
VSSRSPNIDFEQQSVEKSHVVYDKWKQNQLKTYTIAWDGIGIIYKLNKTNHELVLTKDNIIKLFKAFTGNEQVSYYDLDP
QLPKTPILAYSRTGGANASGTAEAFLTSNPLISKKEFKKKYHDIYKVIEAGTYGKLIRSTEESNTQAWTNISKDNVDGSI
TYLSTGFILKNYDQIIAKGYKIAYLQNKDLKNYLPFEINENKQEIVNVAKTYGWYRPFNLVFSLNMQGIKNTKEFVWWLL
TNKKVEKIIQESGFIPLTFEQKNSMFLKPYKDEQSFQEAINNQSAKNNFFVSDFELIESNRINILGAKSA

Sequences:

>Translated_390_residues
MRLRYKILCASLGVVGVVGVIAAISIDYKQIPIVYANGSSSVLPLIQALSEKHHKQDIISNAGGSSLGIIEAVEQRTNIG
VSSRSPNIDFEQQSVEKSHVVYDK*KQNQLKTYTIA*DGIGIIYKLNKTNHELVLTKDNIIKLFKAFTGNEQVSYYDLDP
QLPKTPILAYSRTGGANASGTAEAFLTSNPLISKKEFKKKYHDIYKVIEAGTYGKLIRSTEESNTQA*TNISKDNVDGSI
TYLSTGFILKNYDQIIAKGYKIAYLQNKDLKNYLPFEINENKQEIVNVAKTYG*YRPFNLVFSLNMQGIKNTKEFV**LL
TNKKVEKIIQESGFIPLTFEQKNSMFLKPYKDEQSFQEAINNQSAKNNFFVSDFELIESNRINILGAKSA
>Mature_390_residues
MRLRYKILCASLGVVGVVGVIAAISIDYKQIPIVYANGSSSVLPLIQALSEKHHKQDIISNAGGSSLGIIEAVEQRTNIG
VSSRSPNIDFEQQSVEKSHVVYDK*KQNQLKTYTIA*DGIGIIYKLNKTNHELVLTKDNIIKLFKAFTGNEQVSYYDLDP
QLPKTPILAYSRTGGANASGTAEAFLTSNPLISKKEFKKKYHDIYKVIEAGTYGKLIRSTEESNTQA*TNISKDNVDGSI
TYLSTGFILKNYDQIIAKGYKIAYLQNKDLKNYLPFEINENKQEIVNVAKTYG*YRPFNLVFSLNMQGIKNTKEFV**LL
TNKKVEKIIQESGFIPLTFEQKNSMFLKPYKDEQSFQEAINNQSAKNNFFVSDFELIESNRINILGAKSA

Specific function: Unknown

COG id: COG0226

COG function: function code P; ABC-type phosphate transport system, periplasmic component

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006059 [H]

Pfam domain/function: PF01547 SBP_bac_1 [H]

EC number: NA

Molecular weight: Translated: 42942; Mature: 42942

Theoretical pI: Translated: 9.60; Mature: 9.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLRYKILCASLGVVGVVGVIAAISIDYKQIPIVYANGSSSVLPLIQALSEKHHKQDIIS
CCEEEEEHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHH
NAGGSSLGIIEAVEQRTNIGVSSRSPNIDFEQQSVEKSHVVYDKKQNQLKTYTIADGIGI
CCCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHCCHHHEEECCCCCCEEEEEEECCCEE
IYKLNKTNHELVLTKDNIIKLFKAFTGNEQVSYYDLDPQLPKTPILAYSRTGGANASGTA
EEEECCCCCEEEEEHHHHHHHHHHHCCCCEEEEEECCCCCCCCCEEEEECCCCCCCCCCE
EAFLTSNPLISKKEFKKKYHDIYKVIEAGTYGKLIRSTEESNTQATNISKDNVDGSITYL
EEEEECCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCEECCCCCCCCCCEEEEE
STGFILKNYDQIIAKGYKIAYLQNKDLKNYLPFEINENKQEIVNVAKTYGYRPFNLVFSL
ECCCHHHHHHHHHHCCEEEEEEECCCCCCCCCEEECCCHHHHHHHHHHCCCCCEEEEEEE
NMQGIKNTKEFVLLTNKKVEKIIQESGFIPLTFEQKNSMFLKPYKDEQSFQEAINNQSAK
ECCCCCCCCEEEEEECHHHHHHHHHCCCEEEEEECCCCEEECCCCCHHHHHHHHCCCCCC
NNFFVSDFELIESNRINILGAKSA
CCEEEEHHHHHCCCCEEEEECCCC
>Mature Secondary Structure
MRLRYKILCASLGVVGVVGVIAAISIDYKQIPIVYANGSSSVLPLIQALSEKHHKQDIIS
CCEEEEEHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHH
NAGGSSLGIIEAVEQRTNIGVSSRSPNIDFEQQSVEKSHVVYDKKQNQLKTYTIADGIGI
CCCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHCCHHHEEECCCCCCEEEEEEECCCEE
IYKLNKTNHELVLTKDNIIKLFKAFTGNEQVSYYDLDPQLPKTPILAYSRTGGANASGTA
EEEECCCCCEEEEEHHHHHHHHHHHCCCCEEEEEECCCCCCCCCEEEEECCCCCCCCCCE
EAFLTSNPLISKKEFKKKYHDIYKVIEAGTYGKLIRSTEESNTQATNISKDNVDGSITYL
EEEEECCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCEECCCCCCCCCCEEEEE
STGFILKNYDQIIAKGYKIAYLQNKDLKNYLPFEINENKQEIVNVAKTYGYRPFNLVFSL
ECCCHHHHHHHHHHCCEEEEEEECCCCCCCCCEEECCCHHHHHHHHHHCCCCCEEEEEEE
NMQGIKNTKEFVLLTNKKVEKIIQESGFIPLTFEQKNSMFLKPYKDEQSFQEAINNQSAK
ECCCCCCCCEEEEEECHHHHHHHHHCCCEEEEEECCCCEEECCCCCHHHHHHHHCCCCCC
NNFFVSDFELIESNRINILGAKSA
CCEEEEHHHHHCCCCEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7569993; 8253680 [H]