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The map label for this gene is cinA [H]

Identifier: 170761979

GI number: 170761979

Start: 101727

End: 102197

Strand: Direct

Name: cinA [H]

Synonym: UPA3_0082

Alternate gene names: 170761979

Gene position: 101727-102197 (Clockwise)

Preceding gene: 170761893

Following gene: 170761963

Centisome position: 13.53

GC content: 28.87

Gene sequence:

>471_bases
ATGAATGTGGCTTTAGAACTAATTAATTTACTAAAAGAAAGACGTTTAAGATTGAGTGTTTGCGAATCAGCAAGTTGTGG
AGCTTTATCATCATCAATTGGTGAAGTTGCAGGTGCTTCAAGTGTTTTTGCAGGTGGTTTTATTAGTTATAGTAATGAAG
TAAAAATTAAATTAGTAGGAGTGAGTGAAAAAACAATTTTTAAATATGGCGCTGTTTCTGAACAAACTGCTAAAGAAATG
TGTTTACAAACAAATCAAAAGTTTAATACTGATATTGCAATTTCAATTACAGGAAATGCTGGACCACAGGGAAGCGAAAA
TAAAGAAGTAGGTTTATTTTACATTGGAATCGCAATTAAAGATTTTGCAATTGTAAAAAAAGTCACATTAAATTCAAATG
AACGTACTTTTAATCGTTTTTCTATAGCATGAGAAGCAATTAGTTATTTAATTGAATTGATAAAAAAATAA

Upstream 100 bases:

>100_bases
TAAAAACTACTTTAAAAAATAAAGTTATACTTTACTTTTTCTAAAAGTGGTTTTTATTATCTAAACTAATAATTATTCAA
TTTGAAAGGATTTTAAAATA

Downstream 100 bases:

>100_bases
TTTTACTAATTCTTTAAATAGGATAGGTGAATAAATTTATGAAAGAAAATAATAATCTTGAGAAATTAGATCCAATTGCA
ACACTTGAAACAAAATTTGC

Product: competence/damage inducible protein CinA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 156; Mature: 156

Protein sequence:

>156_residues
MNVALELINLLKERRLRLSVCESASCGALSSSIGEVAGASSVFAGGFISYSNEVKIKLVGVSEKTIFKYGAVSEQTAKEM
CLQTNQKFNTDIAISITGNAGPQGSENKEVGLFYIGIAIKDFAIVKKVTLNSNERTFNRFSIAWEAISYLIELIKK

Sequences:

>Translated_156_residues
MNVALELINLLKERRLRLSVCESASCGALSSSIGEVAGASSVFAGGFISYSNEVKIKLVGVSEKTIFKYGAVSEQTAKEM
CLQTNQKFNTDIAISITGNAGPQGSENKEVGLFYIGIAIKDFAIVKKVTLNSNERTFNRFSIA*EAISYLIELIKK
>Mature_156_residues
MNVALELINLLKERRLRLSVCESASCGALSSSIGEVAGASSVFAGGFISYSNEVKIKLVGVSEKTIFKYGAVSEQTAKEM
CLQTNQKFNTDIAISITGNAGPQGSENKEVGLFYIGIAIKDFAIVKKVTLNSNERTFNRFSIA*EAISYLIELIKK

Specific function: Unknown

COG id: COG1546

COG function: function code R; Uncharacterized protein (competence- and mitomycin-induced)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CinA family [H]

Homologues:

Organism=Escherichia coli, GI1789052, Length=153, Percent_Identity=32.6797385620915, Blast_Score=87, Evalue=5e-19,
Organism=Escherichia coli, GI1787818, Length=120, Percent_Identity=30.8333333333333, Blast_Score=74, Evalue=4e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008136
- InterPro:   IPR008135
- InterPro:   IPR001453 [H]

Pfam domain/function: PF02464 CinA; PF00994 MoCF_biosynth [H]

EC number: NA

Molecular weight: Translated: 16749; Mature: 16749

Theoretical pI: Translated: 8.82; Mature: 8.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNVALELINLLKERRLRLSVCESASCGALSSSIGEVAGASSVFAGGFISYSNEVKIKLVG
CCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCHHHCCCEEEECCCEEEEEEE
VSEKTIFKYGAVSEQTAKEMCLQTNQKFNTDIAISITGNAGPQGSENKEVGLFYIGIAIK
CCCHHEEEECCCCHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCCEEEEEEEEEHH
DFAIVKKVTLNSNERTFNRFSIAEAISYLIELIKK
HHHHHEEEECCCCCCHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNVALELINLLKERRLRLSVCESASCGALSSSIGEVAGASSVFAGGFISYSNEVKIKLVG
CCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCHHHCCCEEEECCCEEEEEEE
VSEKTIFKYGAVSEQTAKEMCLQTNQKFNTDIAISITGNAGPQGSENKEVGLFYIGIAIK
CCCHHEEEECCCCHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCCEEEEEEEEEHH
DFAIVKKVTLNSNERTFNRFSIAEAISYLIELIKK
HHHHHEEEECCCCCCHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA