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The map label for this gene is recA

Identifier: 170761963

GI number: 170761963

Start: 102236

End: 103240

Strand: Direct

Name: recA

Synonym: UPA3_0083

Alternate gene names: 170761963

Gene position: 102236-103240 (Clockwise)

Preceding gene: 170761979

Following gene: 170761917

Centisome position: 13.6

GC content: 27.66

Gene sequence:

>1005_bases
ATGAAAGAAAATAATAATCTTGAGAAATTAGATCCAATTGCAACACTTGAAACAAAATTTGCTAAATCATCTTATTTTAT
TGCTGATGAAATAAAAGATGAAAAAATTAATGCAATATCTACAGGATCAATTCATATAGATCAAATAACAGGAATTAATG
GAATTCCAGTAGGAAAAATTACAGAAATTTATGGTAATGAATCATCAGGTAAAACTACAATTGCTTTACAAACAATTGCT
GAATGTCAAAAAACTGGTGGGACAGTAGTTTTGTTAGATCTTGAGGGCTCATTTGATATTAATTATGCCAAAAGTCTAAA
AGTCGATTTAACAAAATTAATCATTACGCAACCTCAAACAGGTGAACAGGCTTTTGATATGATTGAAACATTGATTAAAA
CAAATTCAATAGATTTAATAGTTATTGATTCAGTTGCTGCAATGCTCCCAGAAAGCGAATATCAAGCAAATATGAATGAA
GCATTGATGGGAGCACACGCTCGCTTAATGTCAAAAGGTTTACGTAAAATTCAACCATTAATTAATAAAAGTAAAACAGC
CATTATTTTTATTAATCAATTACGTGAAAAAATTAATACTTTTTTTGGCAATCCTGAAATGACCACAGGCGGTAAAGCTT
TAAAATTTTATGCTAGTTTGAGAATAGAAACCAAAAAAGCAGATTTAATTAAAGAGGGTATTAATAAAATTGGTATAAAA
ACAAAAGTAACAACAGTTAAAAACAAATTAGCACCACCGTTACAAACATGTTTTATTGATATTTTTTTTGGTTCTGGTTT
CGATTATAATAATGAAATTATAGATTTTGCAATCCAATATGGCGTCTTGAAAAAAAACGGTTCTTGATTTTATTTTAATG
ATAATAAAATAGGGCAAGGGCGAGAACAATTAAAAAATACACTATCAAAAAACAATGAACTTTTTATACAAATTTCAGAA
AAAACTTTGGAGTTTGTCAATAATGAAAAAAGCAATTGACAATAA

Upstream 100 bases:

>100_bases
TTAATCGTTTTTCTATAGCATGAGAAGCAATTAGTTATTTAATTGAATTGATAAAAAAATAATTTTACTAATTCTTTAAA
TAGGATAGGTGAATAAATTT

Downstream 100 bases:

>100_bases
CTTGTAATATAATTATTATTGGTGATATAAGATGGGTTATTTAATAGCATTTATTATATTACTAATATTATTTGTATTGC
TGATTACCATTGTTCCAGTT

Product: recombinase A

Products: NA

Alternate protein names: Recombinase A [H]

Number of amino acids: Translated: 334; Mature: 334

Protein sequence:

>334_residues
MKENNNLEKLDPIATLETKFAKSSYFIADEIKDEKINAISTGSIHIDQITGINGIPVGKITEIYGNESSGKTTIALQTIA
ECQKTGGTVVLLDLEGSFDINYAKSLKVDLTKLIITQPQTGEQAFDMIETLIKTNSIDLIVIDSVAAMLPESEYQANMNE
ALMGAHARLMSKGLRKIQPLINKSKTAIIFINQLREKINTFFGNPEMTTGGKALKFYASLRIETKKADLIKEGINKIGIK
TKVTTVKNKLAPPLQTCFIDIFFGSGFDYNNEIIDFAIQYGVLKKNGSWFYFNDNKIGQGREQLKNTLSKNNELFIQISE
KTLEFVNNEKSNWQ

Sequences:

>Translated_334_residues
MKENNNLEKLDPIATLETKFAKSSYFIADEIKDEKINAISTGSIHIDQITGINGIPVGKITEIYGNESSGKTTIALQTIA
ECQKTGGTVVLLDLEGSFDINYAKSLKVDLTKLIITQPQTGEQAFDMIETLIKTNSIDLIVIDSVAAMLPESEYQANMNE
ALMGAHARLMSKGLRKIQPLINKSKTAIIFINQLREKINTFFGNPEMTTGGKALKFYASLRIETKKADLIKEGINKIGIK
TKVTTVKNKLAPPLQTCFIDIFFGSGFDYNNEIIDFAIQYGVLKKNGS*FYFNDNKIGQGREQLKNTLSKNNELFIQISE
KTLEFVNNEKSN*Q
>Mature_334_residues
MKENNNLEKLDPIATLETKFAKSSYFIADEIKDEKINAISTGSIHIDQITGINGIPVGKITEIYGNESSGKTTIALQTIA
ECQKTGGTVVLLDLEGSFDINYAKSLKVDLTKLIITQPQTGEQAFDMIETLIKTNSIDLIVIDSVAAMLPESEYQANMNE
ALMGAHARLMSKGLRKIQPLINKSKTAIIFINQLREKINTFFGNPEMTTGGKALKFYASLRIETKKADLIKEGINKIGIK
TKVTTVKNKLAPPLQTCFIDIFFGSGFDYNNEIIDFAIQYGVLKKNGS*FYFNDNKIGQGREQLKNTLSKNNELFIQISE
KTLEFVNNEKSN*Q

Specific function: Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with lexA causing its activation

COG id: COG0468

COG function: function code L; RecA/RadA recombinase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recA family [H]

Homologues:

Organism=Escherichia coli, GI1789051, Length=314, Percent_Identity=40.7643312101911, Blast_Score=265, Evalue=2e-72,

Paralogues:

None

Copy number: 1548 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 800-1200 (L-broth) 40,000-60,000 (L-broth + Nalidixate) 4,000 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR013765
- InterPro:   IPR020584
- InterPro:   IPR020588
- InterPro:   IPR020587 [H]

Pfam domain/function: PF00154 RecA [H]

EC number: NA

Molecular weight: Translated: 36877; Mature: 36877

Theoretical pI: Translated: 8.15; Mature: 8.15

Prosite motif: PS00321 RECA_1 ; PS50162 RECA_2 ; PS50163 RECA_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKENNNLEKLDPIATLETKFAKSSYFIADEIKDEKINAISTGSIHIDQITGINGIPVGKI
CCCCCCCHHHCCHHHHHHHHCCCCEEEHHCCCCCCCCEEECCCEEEEEECCCCCCCCCCE
TEIYGNESSGKTTIALQTIAECQKTGGTVVLLDLEGSFDINYAKSLKVDLTKLIITQPQT
EEECCCCCCCCEEEEHHHHHHHHHCCCEEEEEEECCCCCCCCHHHHHEEEEEEEEECCCC
GEQAFDMIETLIKTNSIDLIVIDSVAAMLPESEYQANMNEALMGAHARLMSKGLRKIQPL
CHHHHHHHHHHHHCCCCCEEEECHHHHHCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
INKSKTAIIFINQLREKINTFFGNPEMTTGGKALKFYASLRIETKKADLIKEGINKIGIK
HCCCCEEEEEHHHHHHHHHHHCCCCCCCCCCCEEEEEEEEEEECHHHHHHHHHHHHCCCE
TKVTTVKNKLAPPLQTCFIDIFFGSGFDYNNEIIDFAIQYGVLKKNGSFYFNDNKIGQGR
EEEEHHHHHCCCCHHHHEEEEEECCCCCCCCHHHHHHHHHCEEECCCCEEECCCCCCCCH
EQLKNTLSKNNELFIQISEKTLEFVNNEKSNQ
HHHHHHHCCCCEEEEEECHHHHHHHCCCCCCC
>Mature Secondary Structure
MKENNNLEKLDPIATLETKFAKSSYFIADEIKDEKINAISTGSIHIDQITGINGIPVGKI
CCCCCCCHHHCCHHHHHHHHCCCCEEEHHCCCCCCCCEEECCCEEEEEECCCCCCCCCCE
TEIYGNESSGKTTIALQTIAECQKTGGTVVLLDLEGSFDINYAKSLKVDLTKLIITQPQT
EEECCCCCCCCEEEEHHHHHHHHHCCCEEEEEEECCCCCCCCHHHHHEEEEEEEEECCCC
GEQAFDMIETLIKTNSIDLIVIDSVAAMLPESEYQANMNEALMGAHARLMSKGLRKIQPL
CHHHHHHHHHHHHCCCCCEEEECHHHHHCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
INKSKTAIIFINQLREKINTFFGNPEMTTGGKALKFYASLRIETKKADLIKEGINKIGIK
HCCCCEEEEEHHHHHHHHHHHCCCCCCCCCCCEEEEEEEEEEECHHHHHHHHHHHHCCCE
TKVTTVKNKLAPPLQTCFIDIFFGSGFDYNNEIIDFAIQYGVLKKNGSFYFNDNKIGQGR
EEEEHHHHHCCCCHHHHEEEEEECCCCCCCCHHHHHHHHHCEEECCCCEEECCCCCCCCH
EQLKNTLSKNNELFIQISEKTLEFVNNEKSNQ
HHHHHHHCCCCEEEEEECHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA