Definition | Ureaplasma parvum serovar 3 str. ATCC 27815 chromosome, complete genome. |
---|---|
Accession | NC_010503 |
Length | 751,679 |
Click here to switch to the map view.
The map label for this gene is potA [H]
Identifier: 170761953
GI number: 170761953
Start: 136821
End: 138380
Strand: Direct
Name: potA [H]
Synonym: UPA3_0110
Alternate gene names: 170761953
Gene position: 136821-138380 (Clockwise)
Preceding gene: 170762301
Following gene: 170761877
Centisome position: 18.2
GC content: 27.56
Gene sequence:
>1560_bases ATGGAAAAAACACTCCTACATCTTAGAGATATTACAAAAATCTATGATGATGGATTTGCTGCTGTAAACAAATTTGATTT AAAAATAAAAAAAGGTGAATTTGTCACTTTATTAGGACCAAGTGGTTGTGGTAAGACAACAATGTTAAAAATTATTGCTG GATTTGAACAACCTACTAATGGAAAAATTTTATATAATGGAATTGATATTAAGGATATGCCAATTCGACTAAGACCAACA TCAACGGTGTTTCAAGACTATGCGCTATTCCCTAATATGACTGTTAAACAAAACATAAAATATGGTTTAAAACTAATGCG TAAACCAAAAGATAATGTTGATCAAAGTATTTATTTGCAAGCTGATAAAGTTTATAATTCAGCTTCTAAAAAAGCAAATG AAAAAATTAAAGAATTAAAAAAACAAAGACGCGGGTTATTGGCTGAAATCAAAAAAATGGATCTTAAATACCAAAAGAAT AAGAACATTTTTGAAATAAAAGAAATGCGAAAAAACCAATATCTTGGCACACTTGATGAACTTTATCAAAAACAAGGTAT TAATAAAAATGGAAAACCAGGTTTTTTAAATTATTTTAAAAGTTGATTTAGTCATGAAAAATTGAATTTAAACGATCCAA TTGATAGAGAAATTTTTAATTTAAAAAAAGCATATAAAGAAAAAAGTGGATTAGATAAACGATATGATAAGATTACTTAC AAATATAATGATCTTGATTATTGAGAATCATATTGAGCAACTTATCCACAATTAAAAAAAGAACAATTTGAAAATAAAAA TATTACACGATTATTAACTAAAGAAGAAGTCGAAAAAGAAGCAAATCGTGTAATTAATTTAGTTGGTTTAAGTGCACGTA AGGATTCGTATCCAAGTGATTTATCGGGTGGTATGCAACAACGTGTTGCACTAGCACGTTCACTAGTAATACAGCCTGAA ATTATTTTATTAGATGAACCATTAAGTGCACTAGATGCAAAAGTACGTAAACAATTACAAGATGAATTAAAAAAACTACA TAAAAATTTAGGAATCACCTTTATTTTAGTAACTCATGATCAAGAAGAGGCTTTAAGTTTATCAGATAAAGTTGTGGTTA TGTCAAATGGTCAAATCGAACAAGTCGGTAAACCAAGTGATATTTATGATTCACCAAATTCATTGTGAGTAGCTAATTTT ATTGGTAAAACTAATATTTTTGAAGGTCATTATATTGCTAAAGGTGAAGTTGAATTTGATGGTATTACTTCTAAAACAGA TGTGATTAATGGTTTTAGCGAAAATGAAGCGTGTTATATTATGATTCGCCCAGAAGACTTTGATGTTGTTAAAAAAGACG AAGGATCAATTAATGCTAGAGTTGAATCAGTATTATATAAAGGGTTAATGTGAGATATTAAGTGTAAATATAATGACATG ATTATTAGTGTTGAAGGTGTTAATAAAGTTAATGAAGGTGATGAAATTGGTTTAGATTGAGATGACATTGATGTGCATGT AATTAAAAAGGATTATTTAAATAATGAACAAGCAATTTAA
Upstream 100 bases:
>100_bases TAATTTTATTAGTGTTTTTTATGTTATATTTTATTTGTTTTCAATTTTGAAATATCATGAGTTTACTCATGTTTTATTTT TTTATTTATGGAGGATATAT
Downstream 100 bases:
>100_bases TTTCAATTTTGCACCATCTAAATTATCAGATATTAACAAAAAAAACGAAACAGTATTTTTTTTAAAAGAAGTTAAAGTAA TTAAAAAAAACAATCGTAAG
Product: spermidine/putrescine transport ATP-binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 519; Mature: 519
Protein sequence:
>519_residues MEKTLLHLRDITKIYDDGFAAVNKFDLKIKKGEFVTLLGPSGCGKTTMLKIIAGFEQPTNGKILYNGIDIKDMPIRLRPT STVFQDYALFPNMTVKQNIKYGLKLMRKPKDNVDQSIYLQADKVYNSASKKANEKIKELKKQRRGLLAEIKKMDLKYQKN KNIFEIKEMRKNQYLGTLDELYQKQGINKNGKPGFLNYFKSWFSHEKLNLNDPIDREIFNLKKAYKEKSGLDKRYDKITY KYNDLDYWESYWATYPQLKKEQFENKNITRLLTKEEVEKEANRVINLVGLSARKDSYPSDLSGGMQQRVALARSLVIQPE IILLDEPLSALDAKVRKQLQDELKKLHKNLGITFILVTHDQEEALSLSDKVVVMSNGQIEQVGKPSDIYDSPNSLWVANF IGKTNIFEGHYIAKGEVEFDGITSKTDVINGFSENEACYIMIRPEDFDVVKKDEGSINARVESVLYKGLMWDIKCKYNDM IISVEGVNKVNEGDEIGLDWDDIDVHVIKKDYLNNEQAI
Sequences:
>Translated_519_residues MEKTLLHLRDITKIYDDGFAAVNKFDLKIKKGEFVTLLGPSGCGKTTMLKIIAGFEQPTNGKILYNGIDIKDMPIRLRPT STVFQDYALFPNMTVKQNIKYGLKLMRKPKDNVDQSIYLQADKVYNSASKKANEKIKELKKQRRGLLAEIKKMDLKYQKN KNIFEIKEMRKNQYLGTLDELYQKQGINKNGKPGFLNYFKS*FSHEKLNLNDPIDREIFNLKKAYKEKSGLDKRYDKITY KYNDLDY*ESY*ATYPQLKKEQFENKNITRLLTKEEVEKEANRVINLVGLSARKDSYPSDLSGGMQQRVALARSLVIQPE IILLDEPLSALDAKVRKQLQDELKKLHKNLGITFILVTHDQEEALSLSDKVVVMSNGQIEQVGKPSDIYDSPNSL*VANF IGKTNIFEGHYIAKGEVEFDGITSKTDVINGFSENEACYIMIRPEDFDVVKKDEGSINARVESVLYKGLM*DIKCKYNDM IISVEGVNKVNEGDEIGLD*DDIDVHVIKKDYLNNEQAI >Mature_519_residues MEKTLLHLRDITKIYDDGFAAVNKFDLKIKKGEFVTLLGPSGCGKTTMLKIIAGFEQPTNGKILYNGIDIKDMPIRLRPT STVFQDYALFPNMTVKQNIKYGLKLMRKPKDNVDQSIYLQADKVYNSASKKANEKIKELKKQRRGLLAEIKKMDLKYQKN KNIFEIKEMRKNQYLGTLDELYQKQGINKNGKPGFLNYFKS*FSHEKLNLNDPIDREIFNLKKAYKEKSGLDKRYDKITY KYNDLDY*ESY*ATYPQLKKEQFENKNITRLLTKEEVEKEANRVINLVGLSARKDSYPSDLSGGMQQRVALARSLVIQPE IILLDEPLSALDAKVRKQLQDELKKLHKNLGITFILVTHDQEEALSLSDKVVVMSNGQIEQVGKPSDIYDSPNSL*VANF IGKTNIFEGHYIAKGEVEFDGITSKTDVINGFSENEACYIMIRPEDFDVVKKDEGSINARVESVLYKGLM*DIKCKYNDM IISVEGVNKVNEGDEIGLD*DDIDVHVIKKDYLNNEQAI
Specific function: Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system [H]
COG id: COG3842
COG function: function code E; ABC-type spermidine/putrescine transport systems, ATPase components
Gene ontology:
Cell location: Cell membrane; Peripheral membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transporter domain [H]
Homologues:
Organism=Homo sapiens, GI116734710, Length=222, Percent_Identity=23.8738738738739, Blast_Score=72, Evalue=1e-12, Organism=Homo sapiens, GI105990541, Length=113, Percent_Identity=31.858407079646, Blast_Score=72, Evalue=2e-12, Organism=Homo sapiens, GI45446740, Length=114, Percent_Identity=31.5789473684211, Blast_Score=71, Evalue=3e-12, Organism=Homo sapiens, GI47078218, Length=114, Percent_Identity=31.5789473684211, Blast_Score=71, Evalue=3e-12, Organism=Homo sapiens, GI42741659, Length=129, Percent_Identity=35.6589147286822, Blast_Score=67, Evalue=4e-11, Organism=Homo sapiens, GI31657092, Length=113, Percent_Identity=32.7433628318584, Blast_Score=67, Evalue=5e-11, Organism=Escherichia coli, GI1787370, Length=218, Percent_Identity=41.743119266055, Blast_Score=159, Evalue=3e-40, Organism=Escherichia coli, GI1787712, Length=221, Percent_Identity=39.3665158371041, Blast_Score=153, Evalue=3e-38, Organism=Escherichia coli, GI87081709, Length=221, Percent_Identity=33.9366515837104, Blast_Score=139, Evalue=4e-34, Organism=Escherichia coli, GI87082267, Length=219, Percent_Identity=39.2694063926941, Blast_Score=139, Evalue=6e-34, Organism=Escherichia coli, GI87081791, Length=207, Percent_Identity=35.2657004830918, Blast_Score=137, Evalue=2e-33, Organism=Escherichia coli, GI1790467, Length=157, Percent_Identity=46.4968152866242, Blast_Score=136, Evalue=3e-33, Organism=Escherichia coli, GI1788761, Length=133, Percent_Identity=46.6165413533835, Blast_Score=135, Evalue=7e-33, Organism=Escherichia coli, GI1788450, Length=158, Percent_Identity=37.3417721518987, Blast_Score=115, Evalue=5e-27, Organism=Escherichia coli, GI1789032, Length=199, Percent_Identity=35.1758793969849, Blast_Score=115, Evalue=6e-27, Organism=Escherichia coli, GI1786398, Length=131, Percent_Identity=38.9312977099237, Blast_Score=103, Evalue=2e-23, Organism=Escherichia coli, GI1787164, Length=92, Percent_Identity=48.9130434782609, Blast_Score=97, Evalue=3e-21, Organism=Escherichia coli, GI1787029, Length=161, Percent_Identity=32.9192546583851, Blast_Score=97, Evalue=3e-21, Organism=Escherichia coli, GI1789672, Length=152, Percent_Identity=33.5526315789474, Blast_Score=92, Evalue=8e-20, Organism=Escherichia coli, GI1788225, Length=119, Percent_Identity=37.8151260504202, Blast_Score=92, Evalue=9e-20, Organism=Escherichia coli, GI1786253, Length=99, Percent_Identity=44.4444444444444, Blast_Score=91, Evalue=1e-19, Organism=Escherichia coli, GI1787089, Length=154, Percent_Identity=32.4675324675325, Blast_Score=91, Evalue=2e-19, Organism=Escherichia coli, GI1788644, Length=124, Percent_Identity=37.0967741935484, Blast_Score=90, Evalue=4e-19, Organism=Escherichia coli, GI48994997, Length=119, Percent_Identity=38.655462184874, Blast_Score=89, Evalue=8e-19, Organism=Escherichia coli, GI1787500, Length=122, Percent_Identity=32.7868852459016, Blast_Score=88, Evalue=1e-18, Organism=Escherichia coli, GI1789962, Length=122, Percent_Identity=35.2459016393443, Blast_Score=88, Evalue=1e-18, Organism=Escherichia coli, GI48994883, Length=178, Percent_Identity=30.8988764044944, Blast_Score=88, Evalue=1e-18, Organism=Escherichia coli, GI1787758, Length=98, Percent_Identity=41.8367346938776, Blast_Score=87, Evalue=2e-18, Organism=Escherichia coli, GI1786872, Length=150, Percent_Identity=32.6666666666667, Blast_Score=87, Evalue=2e-18, Organism=Escherichia coli, GI1786563, Length=97, Percent_Identity=43.298969072165, Blast_Score=86, Evalue=5e-18, Organism=Escherichia coli, GI1788506, Length=123, Percent_Identity=30.8943089430894, Blast_Score=84, Evalue=1e-17, Organism=Escherichia coli, GI145693107, Length=124, Percent_Identity=33.0645161290323, Blast_Score=83, Evalue=5e-17, Organism=Escherichia coli, GI1786703, Length=146, Percent_Identity=34.2465753424658, Blast_Score=82, Evalue=1e-16, Organism=Escherichia coli, GI1789963, Length=138, Percent_Identity=31.8840579710145, Blast_Score=81, Evalue=1e-16, Organism=Escherichia coli, GI1787547, Length=138, Percent_Identity=33.3333333333333, Blast_Score=79, Evalue=8e-16, Organism=Escherichia coli, GI1787105, Length=145, Percent_Identity=33.1034482758621, Blast_Score=74, Evalue=2e-14, Organism=Escherichia coli, GI1789873, Length=125, Percent_Identity=31.2, Blast_Score=74, Evalue=2e-14, Organism=Escherichia coli, GI1790544, Length=104, Percent_Identity=34.6153846153846, Blast_Score=73, Evalue=5e-14, Organism=Escherichia coli, GI87081782, Length=100, Percent_Identity=35, Blast_Score=72, Evalue=7e-14, Organism=Escherichia coli, GI1789864, Length=147, Percent_Identity=29.9319727891156, Blast_Score=72, Evalue=9e-14, Organism=Escherichia coli, GI87081834, Length=112, Percent_Identity=37.5, Blast_Score=72, Evalue=1e-13, Organism=Escherichia coli, GI1790162, Length=92, Percent_Identity=35.8695652173913, Blast_Score=71, Evalue=1e-13, Organism=Escherichia coli, GI1787759, Length=96, Percent_Identity=36.4583333333333, Blast_Score=71, Evalue=1e-13, Organism=Escherichia coli, GI1789891, Length=85, Percent_Identity=41.1764705882353, Blast_Score=71, Evalue=2e-13, Organism=Escherichia coli, GI1790190, Length=104, Percent_Identity=33.6538461538462, Blast_Score=68, Evalue=1e-12, Organism=Escherichia coli, GI1789890, Length=100, Percent_Identity=33, Blast_Score=64, Evalue=2e-11, Organism=Escherichia coli, GI1786981, Length=120, Percent_Identity=35.8333333333333, Blast_Score=64, Evalue=2e-11, Organism=Escherichia coli, GI1786698, Length=155, Percent_Identity=30.3225806451613, Blast_Score=64, Evalue=3e-11, Organism=Escherichia coli, GI1789593, Length=117, Percent_Identity=29.0598290598291, Blast_Score=64, Evalue=3e-11, Organism=Escherichia coli, GI1788472, Length=83, Percent_Identity=36.144578313253, Blast_Score=63, Evalue=4e-11, Organism=Escherichia coli, GI1786319, Length=90, Percent_Identity=34.4444444444444, Blast_Score=63, Evalue=4e-11, Organism=Escherichia coli, GI1789586, Length=131, Percent_Identity=33.587786259542, Blast_Score=63, Evalue=6e-11, Organism=Caenorhabditis elegans, GI25146777, Length=90, Percent_Identity=43.3333333333333, Blast_Score=71, Evalue=2e-12, Organism=Caenorhabditis elegans, GI17511077, Length=86, Percent_Identity=45.3488372093023, Blast_Score=70, Evalue=4e-12, Organism=Caenorhabditis elegans, GI71992290, Length=105, Percent_Identity=36.1904761904762, Blast_Score=67, Evalue=2e-11, Organism=Drosophila melanogaster, GI116007328, Length=108, Percent_Identity=33.3333333333333, Blast_Score=77, Evalue=4e-14, Organism=Drosophila melanogaster, GI28574150, Length=108, Percent_Identity=33.3333333333333, Blast_Score=76, Evalue=5e-14, Organism=Drosophila melanogaster, GI45550390, Length=85, Percent_Identity=45.8823529411765, Blast_Score=74, Evalue=3e-13, Organism=Drosophila melanogaster, GI221500365, Length=106, Percent_Identity=35.8490566037736, Blast_Score=73, Evalue=4e-13, Organism=Drosophila melanogaster, GI116007184, Length=106, Percent_Identity=35.8490566037736, Blast_Score=73, Evalue=4e-13, Organism=Drosophila melanogaster, GI24643674, Length=140, Percent_Identity=30.7142857142857, Blast_Score=70, Evalue=3e-12, Organism=Drosophila melanogaster, GI85726357, Length=83, Percent_Identity=42.1686746987952, Blast_Score=70, Evalue=5e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003439 - InterPro: IPR017871 - InterPro: IPR003593 - InterPro: IPR008995 - InterPro: IPR017879 - InterPro: IPR013611 [H]
Pfam domain/function: PF00005 ABC_tran; PF08402 TOBE_2 [H]
EC number: =3.6.3.31 [H]
Molecular weight: Translated: 58607; Mature: 58607
Theoretical pI: Translated: 8.90; Mature: 8.90
Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEKTLLHLRDITKIYDDGFAAVNKFDLKIKKGEFVTLLGPSGCGKTTMLKIIAGFEQPTN CCCHHHHHHHHHHHHCCCHHEEEEEEEEEECCCEEEEECCCCCCHHHHHHHHHCCCCCCC GKILYNGIDIKDMPIRLRPTSTVFQDYALFPNMTVKQNIKYGLKLMRKPKDNVDQSIYLQ CEEEEECCCCCCCCEEECCCHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEE ADKVYNSASKKANEKIKELKKQRRGLLAEIKKMDLKYQKNKNIFEIKEMRKNQYLGTLDE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCHHHH LYQKQGINKNGKPGFLNYFKSFSHEKLNLNDPIDREIFNLKKAYKEKSGLDKRYDKITYK HHHHCCCCCCCCCHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHEEEEE YNDLDYESYATYPQLKKEQFENKNITRLLTKEEVEKEANRVINLVGLSARKDSYPSDLSG ECCCCCHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCHHHH GMQQRVALARSLVIQPEIILLDEPLSALDAKVRKQLQDELKKLHKNLGITFILVTHDQEE HHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCHHH ALSLSDKVVVMSNGQIEQVGKPSDIYDSPNSLVANFIGKTNIFEGHYIAKGEVEFDGITS HHCCCCCEEEEECCCHHCCCCCCCCCCCHHHHHHHHCCCCCCCCCEEEEECEEEECCCCC KTDVINGFSENEACYIMIRPEDFDVVKKDEGSINARVESVLYKGLMDIKCKYNDMIISVE HHHHHCCCCCCCEEEEEECCCCCCCEECCCCCHHHHHHHHHHHCCCEEEEEECCEEEEEE GVNKVNEGDEIGLDDDIDVHVIKKDYLNNEQAI CCCCCCCCCCCCCCCCCEEEEEEHHHCCCCCCC >Mature Secondary Structure MEKTLLHLRDITKIYDDGFAAVNKFDLKIKKGEFVTLLGPSGCGKTTMLKIIAGFEQPTN CCCHHHHHHHHHHHHCCCHHEEEEEEEEEECCCEEEEECCCCCCHHHHHHHHHCCCCCCC GKILYNGIDIKDMPIRLRPTSTVFQDYALFPNMTVKQNIKYGLKLMRKPKDNVDQSIYLQ CEEEEECCCCCCCCEEECCCHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEE ADKVYNSASKKANEKIKELKKQRRGLLAEIKKMDLKYQKNKNIFEIKEMRKNQYLGTLDE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCHHHH LYQKQGINKNGKPGFLNYFKSFSHEKLNLNDPIDREIFNLKKAYKEKSGLDKRYDKITYK HHHHCCCCCCCCCHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHEEEEE YNDLDYESYATYPQLKKEQFENKNITRLLTKEEVEKEANRVINLVGLSARKDSYPSDLSG ECCCCCHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCHHHH GMQQRVALARSLVIQPEIILLDEPLSALDAKVRKQLQDELKKLHKNLGITFILVTHDQEE HHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCHHH ALSLSDKVVVMSNGQIEQVGKPSDIYDSPNSLVANFIGKTNIFEGHYIAKGEVEFDGITS HHCCCCCEEEEECCCHHCCCCCCCCCCCHHHHHHHHCCCCCCCCCEEEEECEEEECCCCC KTDVINGFSENEACYIMIRPEDFDVVKKDEGSINARVESVLYKGLMDIKCKYNDMIISVE HHHHHCCCCCCCEEEEEECCCCCCCEECCCCCHHHHHHHHHHHCCCEEEEEECCEEEEEE GVNKVNEGDEIGLDDDIDVHVIKKDYLNNEQAI CCCCCCCCCCCCCCCCCEEEEEEHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11048724 [H]