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The map label for this gene is pepF1

Identifier: 170761916

GI number: 170761916

Start: 80259

End: 82085

Strand: Reverse

Name: pepF1

Synonym: UPA3_0064

Alternate gene names: 170761916

Gene position: 82085-80259 (Counterclockwise)

Preceding gene: 170762420

Following gene: 170761863

Centisome position: 10.92

GC content: 26.44

Gene sequence:

>1827_bases
ATGGAAAATAAAAAATACGAATGAGATCTTGATGATTTATTAAACAACAAATCATTAGATGATTTATATGCTGAATTTGA
AGAAAAAAAAGCTAAATACATTAAAGCTTTTCCAACTTTTTTAGATTCAAAACAAAATTTTGCTCAATGACAAATTTTAG
AAGAAGAATTCACAATTGTTGCAAATCGTTTTTATAATTATGTATCAAATAATTTAAATACTAATGTTGTTGATCCAAAA
TGAAATTCTTGATCACAAAAACTATCAGCTTCTTTTTATGAATTAGAAACAGCATTAAGTAATTATAATAGTGTAGTTTT
AGCAAACGAAGCAAAGATTAAAGAATATTTGACAGATTCTCAATTAAATGTATATACACGCAAGTATAATGAAATTTTTC
GTTATCAACCACACACATTAAATAATGAACAAAGTAAGTTATTTTCAACATTAATACGTGCTGATGAAGGTTTTTCAACA
ATTTTTTCAACATATACAAATAATGATATGAAATTTAGTGATGCTATTGATGCAAAAGGTAAAAAACACCCAATTAAGAA
TGAAGCAGAAGCTTTTGTTCATTTAAAATCAAAAGATCGCGTTTTGCGTAAAAGCGCTTATTTATCAATGTATAGAGCAT
ATTATGATTCACGTGAATCAATTACAAAAATGTTGTACTACAACTATTTATCATTAAATCAACAAGCAAAAGCAAAAAAC
TTTGATGATTATATTGCTAAAGCAGCATTTGATGATGTTGTTGACAAATCATTAATTACTTTAATTTATGATCAAGTAAA
ACTTTATAAAGATACAAATGAAGATTATAAAAAAGTACGAAATACATATTTAAAAAAATTAATTAAAGTTTCAAAGATCG
AACCTTGAGATAATGGACTACCATTAATTTCTAAAAAAATTGACATTCCAATTGAAGAAGCAAAACAAATGGCTATTGAT
TCATTATCAATTTTAGGTGATGAATATGTAAGTAATATTAAACGAGCATTCGATGAAAAATGAGTTTCATGATTACCACA
AAAAGGGAAACGTGGTGGGGCTTATTCAATTGGTGGCACAAAGGGTATTAGTAAATATTATATTTTAATGAACTATACTA
ACTCATTACGTGATGTACAAACTATTGTTCATGAATTAGGCCACTCAATGCATTCGTTATATTCTAATCGCACACAAAAA
ATTTATAGTGATTACAAGATTTTCTATGCGGAAATTGCATCAATTTCAAATGAAGTTTATTTAAACTACTATTTATTAGA
AAAATACAAGAACGATCTTGAAATGAAATTAATGATTTTAGATGAAATGATTAGTGGGTTCTTCGCAACAACAACAAGAC
AAGTAATTTTTTCAAATTTTGAATGAATTGCTAATGAATTAATTAATAGTGGGGCACCATTTACGGCAGATGTTGTTATG
AAAGAATATCAAAAACTAGAACTTGAATATACTAACAAACCAATTGTAGAGGATCTAAATTCAATTTATTCATTATCAAG
CATTACTCCACTTCGTATTCCTCATTTTTATGTAGGTAATTTTTATGTATATAAATATGCAGTAGGTCAAGTTGCAGCAA
TTATTTCAGGCCATCGTGTTTTCACTAAAGTAACAGGTGCAAAACAAAAAGTGTTTGATTTCTTATCAAGTGGTGGTTCA
AAAGATCCATTAGATACAATTAAATTACTAGGTGTTGATTTAACAAAACCACAAGCATGACAAGAAGCCTTAGAAATTGT
TAAATTATGAATTAAAGATTATAAACAAACAATTGCTTTACTAAATAAAAAAAGAAGCAAAAAATAA

Upstream 100 bases:

>100_bases
TAGAACTCAACATGATTTTTTTCCTATTTTTTAGCAATTAACTTTATATATTGCTATTAATAAATATTATAATTATTATA
TTCGTTATAAGGAGTTTGTA

Downstream 100 bases:

>100_bases
TATTTAAATTTCAAAAGGTTTAATATGAGTGACGAACAAAAAACTAAATTAATAGAATTGAAGCAAAAAGTTAATGATCT
TGAGTTTGAATTAGATAAAA

Product: oligoendopeptidase F

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 608; Mature: 608

Protein sequence:

>608_residues
MENKKYEWDLDDLLNNKSLDDLYAEFEEKKAKYIKAFPTFLDSKQNFAQWQILEEEFTIVANRFYNYVSNNLNTNVVDPK
WNSWSQKLSASFYELETALSNYNSVVLANEAKIKEYLTDSQLNVYTRKYNEIFRYQPHTLNNEQSKLFSTLIRADEGFST
IFSTYTNNDMKFSDAIDAKGKKHPIKNEAEAFVHLKSKDRVLRKSAYLSMYRAYYDSRESITKMLYYNYLSLNQQAKAKN
FDDYIAKAAFDDVVDKSLITLIYDQVKLYKDTNEDYKKVRNTYLKKLIKVSKIEPWDNGLPLISKKIDIPIEEAKQMAID
SLSILGDEYVSNIKRAFDEKWVSWLPQKGKRGGAYSIGGTKGISKYYILMNYTNSLRDVQTIVHELGHSMHSLYSNRTQK
IYSDYKIFYAEIASISNEVYLNYYLLEKYKNDLEMKLMILDEMISGFFATTTRQVIFSNFEWIANELINSGAPFTADVVM
KEYQKLELEYTNKPIVEDLNSIYSLSSITPLRIPHFYVGNFYVYKYAVGQVAAIISGHRVFTKVTGAKQKVFDFLSSGGS
KDPLDTIKLLGVDLTKPQAWQEALEIVKLWIKDYKQTIALLNKKRSKK

Sequences:

>Translated_608_residues
MENKKYE*DLDDLLNNKSLDDLYAEFEEKKAKYIKAFPTFLDSKQNFAQ*QILEEEFTIVANRFYNYVSNNLNTNVVDPK
*NS*SQKLSASFYELETALSNYNSVVLANEAKIKEYLTDSQLNVYTRKYNEIFRYQPHTLNNEQSKLFSTLIRADEGFST
IFSTYTNNDMKFSDAIDAKGKKHPIKNEAEAFVHLKSKDRVLRKSAYLSMYRAYYDSRESITKMLYYNYLSLNQQAKAKN
FDDYIAKAAFDDVVDKSLITLIYDQVKLYKDTNEDYKKVRNTYLKKLIKVSKIEP*DNGLPLISKKIDIPIEEAKQMAID
SLSILGDEYVSNIKRAFDEK*VS*LPQKGKRGGAYSIGGTKGISKYYILMNYTNSLRDVQTIVHELGHSMHSLYSNRTQK
IYSDYKIFYAEIASISNEVYLNYYLLEKYKNDLEMKLMILDEMISGFFATTTRQVIFSNFE*IANELINSGAPFTADVVM
KEYQKLELEYTNKPIVEDLNSIYSLSSITPLRIPHFYVGNFYVYKYAVGQVAAIISGHRVFTKVTGAKQKVFDFLSSGGS
KDPLDTIKLLGVDLTKPQA*QEALEIVKL*IKDYKQTIALLNKKRSKK
>Mature_608_residues
MENKKYE*DLDDLLNNKSLDDLYAEFEEKKAKYIKAFPTFLDSKQNFAQ*QILEEEFTIVANRFYNYVSNNLNTNVVDPK
*NS*SQKLSASFYELETALSNYNSVVLANEAKIKEYLTDSQLNVYTRKYNEIFRYQPHTLNNEQSKLFSTLIRADEGFST
IFSTYTNNDMKFSDAIDAKGKKHPIKNEAEAFVHLKSKDRVLRKSAYLSMYRAYYDSRESITKMLYYNYLSLNQQAKAKN
FDDYIAKAAFDDVVDKSLITLIYDQVKLYKDTNEDYKKVRNTYLKKLIKVSKIEP*DNGLPLISKKIDIPIEEAKQMAID
SLSILGDEYVSNIKRAFDEK*VS*LPQKGKRGGAYSIGGTKGISKYYILMNYTNSLRDVQTIVHELGHSMHSLYSNRTQK
IYSDYKIFYAEIASISNEVYLNYYLLEKYKNDLEMKLMILDEMISGFFATTTRQVIFSNFE*IANELINSGAPFTADVVM
KEYQKLELEYTNKPIVEDLNSIYSLSSITPLRIPHFYVGNFYVYKYAVGQVAAIISGHRVFTKVTGAKQKVFDFLSSGGS
KDPLDTIKLLGVDLTKPQA*QEALEIVKL*IKDYKQTIALLNKKRSKK

Specific function: Unknown

COG id: COG1164

COG function: function code E; Oligoendopeptidase F

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M3B family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001567
- InterPro:   IPR004438
- InterPro:   IPR013647 [H]

Pfam domain/function: PF01432 Peptidase_M3; PF08439 Peptidase_M3_N [H]

EC number: NA

Molecular weight: Translated: 68788; Mature: 68788

Theoretical pI: Translated: 9.17; Mature: 9.17

Prosite motif: PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MENKKYEDLDDLLNNKSLDDLYAEFEEKKAKYIKAFPTFLDSKQNFAQQILEEEFTIVAN
CCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
RFYNYVSNNLNTNVVDPKNSSQKLSASFYELETALSNYNSVVLANEAKIKEYLTDSQLNV
HHHHHHHCCCCCCEECCCCCCHHHHHHHHHHHHHHHCCCCEEEECHHHHHHHHCCCCHHH
YTRKYNEIFRYQPHTLNNEQSKLFSTLIRADEGFSTIFSTYTNNDMKFSDAIDAKGKKHP
HHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHCCCCCEECHHHCCCCCCCC
IKNEAEAFVHLKSKDRVLRKSAYLSMYRAYYDSRESITKMLYYNYLSLNQQAKAKNFDDY
CCCCHHHHEEECHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHCCCHHHH
IAKAAFDDVVDKSLITLIYDQVKLYKDTNEDYKKVRNTYLKKLIKVSKIEPDNGLPLISK
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
KIDIPIEEAKQMAIDSLSILGDEYVSNIKRAFDEKVSLPQKGKRGGAYSIGGTKGISKYY
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEECCCCCCCCEEE
ILMNYTNSLRDVQTIVHELGHSMHSLYSNRTQKIYSDYKIFYAEIASISNEVYLNYYLLE
EEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHH
KYKNDLEMKLMILDEMISGFFATTTRQVIFSNFEIANELINSGAPFTADVVMKEYQKLEL
HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
EYTNKPIVEDLNSIYSLSSITPLRIPHFYVGNFYVYKYAVGQVAAIISGHRVFTKVTGAK
HCCCCCHHHHHHHHHHHHCCCCCCCCEEEECCEEEEHHHHHHHHHHHCCCHHEEHHCCHH
QKVFDFLSSGGSKDPLDTIKLLGVDLTKPQAQEALEIVKLIKDYKQTIALLNKKRSKK
HHHHHHHHCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MENKKYEDLDDLLNNKSLDDLYAEFEEKKAKYIKAFPTFLDSKQNFAQQILEEEFTIVAN
CCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
RFYNYVSNNLNTNVVDPKNSSQKLSASFYELETALSNYNSVVLANEAKIKEYLTDSQLNV
HHHHHHHCCCCCCEECCCCCCHHHHHHHHHHHHHHHCCCCEEEECHHHHHHHHCCCCHHH
YTRKYNEIFRYQPHTLNNEQSKLFSTLIRADEGFSTIFSTYTNNDMKFSDAIDAKGKKHP
HHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHCCCCCEECHHHCCCCCCCC
IKNEAEAFVHLKSKDRVLRKSAYLSMYRAYYDSRESITKMLYYNYLSLNQQAKAKNFDDY
CCCCHHHHEEECHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHCCCHHHH
IAKAAFDDVVDKSLITLIYDQVKLYKDTNEDYKKVRNTYLKKLIKVSKIEPDNGLPLISK
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
KIDIPIEEAKQMAIDSLSILGDEYVSNIKRAFDEKVSLPQKGKRGGAYSIGGTKGISKYY
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEECCCCCCCCEEE
ILMNYTNSLRDVQTIVHELGHSMHSLYSNRTQKIYSDYKIFYAEIASISNEVYLNYYLLE
EEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHH
KYKNDLEMKLMILDEMISGFFATTTRQVIFSNFEIANELINSGAPFTADVVMKEYQKLEL
HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
EYTNKPIVEDLNSIYSLSSITPLRIPHFYVGNFYVYKYAVGQVAAIISGHRVFTKVTGAK
HCCCCCHHHHHHHHHHHHCCCCCCCCEEEECCEEEEHHHHHHHHHHHCCCHHEEHHCCHH
QKVFDFLSSGGSKDPLDTIKLLGVDLTKPQAQEALEIVKLIKDYKQTIALLNKKRSKK
HHHHHHHHCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7569993; 8253680 [H]