Definition | Ureaplasma parvum serovar 3 str. ATCC 27815 chromosome, complete genome. |
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Accession | NC_010503 |
Length | 751,679 |
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The map label for this gene is 170761892
Identifier: 170761892
GI number: 170761892
Start: 108923
End: 110626
Strand: Direct
Name: 170761892
Synonym: UPA3_0091
Alternate gene names: NA
Gene position: 108923-110626 (Clockwise)
Preceding gene: 170762009
Following gene: 170762113
Centisome position: 14.49
GC content: 27.93
Gene sequence:
>1704_bases ATGGCTAATGAGTATTATAATATGTGTGCCTTAGATGCACTCAAATTTGTGAAAAATAGAAATATGTTATTACCAGATAT TCAAAGAGAATATGTTTGGGATACAACTGATATAGAAAAATTATTTGAATCTATAGTTGATGATTATCCAGTGGGTTCTT GTATATTTTGGAAAACAAATAAAAAAGTACTTAATGATGAAAAACCAAATCTTTATTATTTTATTTCTAAATATAAGCAA GGCGTAACTAAAAATGAAAAAGCACCAGAATTTGTATCTGATGAAACAGATTATTATATAGTATTAGATGGACAACAAAG AATTACATCTCTTAATATTGCATTGTTTGGATCGTTTACATCTAAGAAAAAAGGTAAAGGATATAGTGTAAAAAATTCTA AATCATGGGTAGAACGAGAACTATATTATAATTTATCTTTTTACGACAGCAATGAATTGGATGATGAAAATCCCATTAAA AGATTTGTATTTTTGTCTGAAGAAGAAGCAAAGAATGGTAATTATTATAAAGTTAAGCAAATAGTTAAAAGTGATAACTT AACTGATTATGTTGATACAATATCGAATTTTAATAAAAATGTAAAAACGGATTTAATGTGTTTGTATAGAAGAATTATGG AAGCGTCTGCCACTAGTGTAATTCATTATTATTGCATTGCAGAGAATACATATGATGAAGCACTAGATATTTTTGTTAGA GTAAATTCTACTGGAAGAAAACTATCAAAGTCCGATTTATTATTTTCTACATTAATTGATGGTTGGAAAGAAGGGAAGGA AAATATAGACACCTTATTGTCTGACTTAAATTCAGCTGGAGATGGATTTTCTTTTACAAGAGATTATTTAATGCGATTGG CTTTGGTATTAGTTGATGCAAATACTAATTTAAAAATTGATTCGTTAACTTCTAAAACAATAAAGGAAATCAGGGATAAC TGGCAAAAAATAAAGAAAGCGCTAGAAAAATTATCTGAATTATTAGTTTCAATTGGCATGTGTGACGAAAATATGACCTC ATATAATGCAACCATTCCACTGGCATATTATTTTTACAAAGGTGGCAAAATTGATACAGCAGAATCAAAAAAAGAAGCAA GAAAGTTCCTAGCCGTTTCAATGTCAAAAGGACTGTTTGGTGTAGCAAGTAATGATTCTTTGAATCAAAGCAGAACTGCT CTTAAGTCAGTAAATGAAAAAACTCCATTTTCATTAACTTTATTTAGTAGTATTACTTTAACGGGTAATAGAACATTTAC TGCATCGAAAGATGATATTGAATATTGGTTGACGAAGTTTGAAAAAGGAAAAAACACATTCATAATTCTTTCTTTGCTTT ATCCTAATTTAAAGTTAAGCCAAGTTGAGTTCCATCAGGATCACTGTCACCCTTATACTTCATTTGATGATAAAAACATT AAAAAATTAGGATTGACAGAAGATAAAATAAAAGAATGGCAGTTTAAAAGAAATTTAATTCCTAATTTGCAGTTTTTGGC AGGTAAGGAAAATGAGTCAAAAAATAAAAGGCCTTTATCAAATTGGGTTAAAGATGGAAATACCTTTGAATATAGACCAG AAAATGTTTCTCTTGAATTATCCAATTTTGATAAATTTTTTAATGAAAGAAAATCCCTTATAAAAAATAAGCTTTTGGAT ATTTTTGGTTTAAAAGCAAACTAA
Upstream 100 bases:
>100_bases CTAAGAACTAGATAATAAAAAATTTTTATTTTTTGATTGAGCTGGTGGTATGCTGGCTCATTTTTTTAATATATTTAATT TGAGAAGAGGCGAGTTAATT
Downstream 100 bases:
>100_bases AAATAAATAAATGTATAAAAATCTAGATTTTACTCAGTTCTAAATAAATTAATTTCTGTATGAAGTGGAATTACATGGTT TTTTTGCTTGAATATTGTAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 567; Mature: 566
Protein sequence:
>567_residues MANEYYNMCALDALKFVKNRNMLLPDIQREYVWDTTDIEKLFESIVDDYPVGSCIFWKTNKKVLNDEKPNLYYFISKYKQ GVTKNEKAPEFVSDETDYYIVLDGQQRITSLNIALFGSFTSKKKGKGYSVKNSKSWVERELYYNLSFYDSNELDDENPIK RFVFLSEEEAKNGNYYKVKQIVKSDNLTDYVDTISNFNKNVKTDLMCLYRRIMEASATSVIHYYCIAENTYDEALDIFVR VNSTGRKLSKSDLLFSTLIDGWKEGKENIDTLLSDLNSAGDGFSFTRDYLMRLALVLVDANTNLKIDSLTSKTIKEIRDN WQKIKKALEKLSELLVSIGMCDENMTSYNATIPLAYYFYKGGKIDTAESKKEARKFLAVSMSKGLFGVASNDSLNQSRTA LKSVNEKTPFSLTLFSSITLTGNRTFTASKDDIEYWLTKFEKGKNTFIILSLLYPNLKLSQVEFHQDHCHPYTSFDDKNI KKLGLTEDKIKEWQFKRNLIPNLQFLAGKENESKNKRPLSNWVKDGNTFEYRPENVSLELSNFDKFFNERKSLIKNKLLD IFGLKAN
Sequences:
>Translated_567_residues MANEYYNMCALDALKFVKNRNMLLPDIQREYVWDTTDIEKLFESIVDDYPVGSCIFWKTNKKVLNDEKPNLYYFISKYKQ GVTKNEKAPEFVSDETDYYIVLDGQQRITSLNIALFGSFTSKKKGKGYSVKNSKSWVERELYYNLSFYDSNELDDENPIK RFVFLSEEEAKNGNYYKVKQIVKSDNLTDYVDTISNFNKNVKTDLMCLYRRIMEASATSVIHYYCIAENTYDEALDIFVR VNSTGRKLSKSDLLFSTLIDGWKEGKENIDTLLSDLNSAGDGFSFTRDYLMRLALVLVDANTNLKIDSLTSKTIKEIRDN WQKIKKALEKLSELLVSIGMCDENMTSYNATIPLAYYFYKGGKIDTAESKKEARKFLAVSMSKGLFGVASNDSLNQSRTA LKSVNEKTPFSLTLFSSITLTGNRTFTASKDDIEYWLTKFEKGKNTFIILSLLYPNLKLSQVEFHQDHCHPYTSFDDKNI KKLGLTEDKIKEWQFKRNLIPNLQFLAGKENESKNKRPLSNWVKDGNTFEYRPENVSLELSNFDKFFNERKSLIKNKLLD IFGLKAN >Mature_566_residues ANEYYNMCALDALKFVKNRNMLLPDIQREYVWDTTDIEKLFESIVDDYPVGSCIFWKTNKKVLNDEKPNLYYFISKYKQG VTKNEKAPEFVSDETDYYIVLDGQQRITSLNIALFGSFTSKKKGKGYSVKNSKSWVERELYYNLSFYDSNELDDENPIKR FVFLSEEEAKNGNYYKVKQIVKSDNLTDYVDTISNFNKNVKTDLMCLYRRIMEASATSVIHYYCIAENTYDEALDIFVRV NSTGRKLSKSDLLFSTLIDGWKEGKENIDTLLSDLNSAGDGFSFTRDYLMRLALVLVDANTNLKIDSLTSKTIKEIRDNW QKIKKALEKLSELLVSIGMCDENMTSYNATIPLAYYFYKGGKIDTAESKKEARKFLAVSMSKGLFGVASNDSLNQSRTAL KSVNEKTPFSLTLFSSITLTGNRTFTASKDDIEYWLTKFEKGKNTFIILSLLYPNLKLSQVEFHQDHCHPYTSFDDKNIK KLGLTEDKIKEWQFKRNLIPNLQFLAGKENESKNKRPLSNWVKDGNTFEYRPENVSLELSNFDKFFNERKSLIKNKLLDI FGLKAN
Specific function: Unknown
COG id: COG1479
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 65623; Mature: 65492
Theoretical pI: Translated: 8.43; Mature: 8.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MANEYYNMCALDALKFVKNRNMLLPDIQREYVWDTTDIEKLFESIVDDYPVGSCIFWKTN CCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCHHHHHHHHHHHCCCCCCCEEEEECC KKVLNDEKPNLYYFISKYKQGVTKNEKAPEFVSDETDYYIVLDGQQRITSLNIALFGSFT CHHCCCCCCCEEEEEEHHHCCCCCCCCCCCCCCCCCCEEEEECCCCCEEEEEEEEEECCC SKKKGKGYSVKNSKSWVERELYYNLSFYDSNELDDENPIKRFVFLSEEEAKNGNYYKVKQ CCCCCCCCCCCCCHHHHHHHHEEEEEEECCCCCCCCCCHHHEEEEECHHCCCCCEEEHHH IVKSDNLTDYVDTISNFNKNVKTDLMCLYRRIMEASATSVIHYYCIAENTYDEALDIFVR HHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHEEEEEEEEECCCHHCEEEEEEE VNSTGRKLSKSDLLFSTLIDGWKEGKENIDTLLSDLNSAGDGFSFTRDYLMRLALVLVDA ECCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHEEEC NTNLKIDSLTSKTIKEIRDNWQKIKKALEKLSELLVSIGMCDENMTSYNATIPLAYYFYK CCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEEEE GGKIDTAESKKEARKFLAVSMSKGLFGVASNDSLNQSRTALKSVNEKTPFSLTLFSSITL CCEECCHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHCCCCCCEEEEEEEEEEE TGNRTFTASKDDIEYWLTKFEKGKNTFIILSLLYPNLKLSQVEFHQDHCHPYTSFDDKNI ECCEEEECCCHHHHHHHHHHHCCCCEEEEEEEECCCCEEEEEEHHHHHCCCCCCCCCCCC KKLGLTEDKIKEWQFKRNLIPNLQFLAGKENESKNKRPLSNWVKDGNTFEYRPENVSLEL CCCCCCHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCHHHHHCCCCCEEECCCCEEEEH SNFDKFFNERKSLIKNKLLDIFGLKAN HHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure ANEYYNMCALDALKFVKNRNMLLPDIQREYVWDTTDIEKLFESIVDDYPVGSCIFWKTN CCCHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCHHHHHHHHHHHCCCCCCCEEEEECC KKVLNDEKPNLYYFISKYKQGVTKNEKAPEFVSDETDYYIVLDGQQRITSLNIALFGSFT CHHCCCCCCCEEEEEEHHHCCCCCCCCCCCCCCCCCCEEEEECCCCCEEEEEEEEEECCC SKKKGKGYSVKNSKSWVERELYYNLSFYDSNELDDENPIKRFVFLSEEEAKNGNYYKVKQ CCCCCCCCCCCCCHHHHHHHHEEEEEEECCCCCCCCCCHHHEEEEECHHCCCCCEEEHHH IVKSDNLTDYVDTISNFNKNVKTDLMCLYRRIMEASATSVIHYYCIAENTYDEALDIFVR HHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHEEEEEEEEECCCHHCEEEEEEE VNSTGRKLSKSDLLFSTLIDGWKEGKENIDTLLSDLNSAGDGFSFTRDYLMRLALVLVDA ECCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHEEEC NTNLKIDSLTSKTIKEIRDNWQKIKKALEKLSELLVSIGMCDENMTSYNATIPLAYYFYK CCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEEEE GGKIDTAESKKEARKFLAVSMSKGLFGVASNDSLNQSRTALKSVNEKTPFSLTLFSSITL CCEECCHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHCCCCCCEEEEEEEEEEE TGNRTFTASKDDIEYWLTKFEKGKNTFIILSLLYPNLKLSQVEFHQDHCHPYTSFDDKNI ECCEEEECCCHHHHHHHHHHHCCCCEEEEEEEECCCCEEEEEEHHHHHCCCCCCCCCCCC KKLGLTEDKIKEWQFKRNLIPNLQFLAGKENESKNKRPLSNWVKDGNTFEYRPENVSLEL CCCCCCHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCHHHHHCCCCCEEECCCCEEEEH SNFDKFFNERKSLIKNKLLDIFGLKAN HHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA