Definition | Ureaplasma parvum serovar 3 str. ATCC 27815 chromosome, complete genome. |
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Accession | NC_010503 |
Length | 751,679 |
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The map label for this gene is 170761874
Identifier: 170761874
GI number: 170761874
Start: 178899
End: 179609
Strand: Direct
Name: 170761874
Synonym: UPA3_0145
Alternate gene names: NA
Gene position: 178899-179609 (Clockwise)
Preceding gene: 170761850
Following gene: 170762065
Centisome position: 23.8
GC content: 18.28
Gene sequence:
>711_bases ATGGATGAACAAATTTTTATTCAATTATTAGAAAACAATCTAACAAATTCAAAATCATATGTGACTCAACCAATAATATT AGAATTTAAAACGGATGTTTTTTTGATTATAAATCAAATTTTAAAACAATATAAAAAAGGTAAAATTATCAAAAATAATA CAAATGAAATTATTTTAGAAATTGATAATAAATTAATTTCTATAACAAATTTAGATATCAATAAATTTCATTCGTATCAA ATTGTTAATATTAATGAAAATAAAAATATTTATAACGAAAGGAATAGTTTAATTTTATTTGATTTAGTAAATTATATCAT TGAAAAAAATCAAAATTCTATCAGACACATTAATTTTTGAACGATTCAAATGAGTGTAGTTAATTGAATTTATTTTATTA CTTATAATTTTAACAATTCATATTTAATTGATCCAAATTGAAAAAAATATGTTTTTAAAATTAAAAAAGATGAATCTAAA GGTGTAATTAGTACCAATTTATTACATAATTATGGTTTTGTGGATTTTGTTGTACAGTCTAAATCACAGAATTTTTTAAA AGCTTATCGTGTTCAAGATGAAATTCTAAAATCTGTTTTAAATTTAGGCGATAACTTAAATAATGAATTTTTAGAAGAAA TCATGAGAAAATATGATACATACAAAATAATTGATAGAGATCATAAATATTTAGTGATCAATATTGAATAA
Upstream 100 bases:
>100_bases TGTATTATAACTATAATAAATTAGTGCTTTTTATTAAAGAATAATCACTAATAAATATTAAATGAATTATTAAAACAAAA GATAAGGAATACAAGAAGGT
Downstream 100 bases:
>100_bases ATTATAATATATAAAATATAAATAAAATCTTATTAACTTAAAATTTAAATTAGGAGATTATATGATTTTTTTAAAGAAAA TAGAAGCACATGGGTTTAAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 236; Mature: 236
Protein sequence:
>236_residues MDEQIFIQLLENNLTNSKSYVTQPIILEFKTDVFLIINQILKQYKKGKIIKNNTNEIILEIDNKLISITNLDINKFHSYQ IVNINENKNIYNERNSLILFDLVNYIIEKNQNSIRHINFWTIQMSVVNWIYFITYNFNNSYLIDPNWKKYVFKIKKDESK GVISTNLLHNYGFVDFVVQSKSQNFLKAYRVQDEILKSVLNLGDNLNNEFLEEIMRKYDTYKIIDRDHKYLVINIE
Sequences:
>Translated_236_residues MDEQIFIQLLENNLTNSKSYVTQPIILEFKTDVFLIINQILKQYKKGKIIKNNTNEIILEIDNKLISITNLDINKFHSYQ IVNINENKNIYNERNSLILFDLVNYIIEKNQNSIRHINF*TIQMSVVN*IYFITYNFNNSYLIDPN*KKYVFKIKKDESK GVISTNLLHNYGFVDFVVQSKSQNFLKAYRVQDEILKSVLNLGDNLNNEFLEEIMRKYDTYKIIDRDHKYLVINIE >Mature_236_residues MDEQIFIQLLENNLTNSKSYVTQPIILEFKTDVFLIINQILKQYKKGKIIKNNTNEIILEIDNKLISITNLDINKFHSYQ IVNINENKNIYNERNSLILFDLVNYIIEKNQNSIRHINF*TIQMSVVN*IYFITYNFNNSYLIDPN*KKYVFKIKKDESK GVISTNLLHNYGFVDFVVQSKSQNFLKAYRVQDEILKSVLNLGDNLNNEFLEEIMRKYDTYKIIDRDHKYLVINIE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27685; Mature: 27685
Theoretical pI: Translated: 8.58; Mature: 8.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDEQIFIQLLENNLTNSKSYVTQPIILEFKTDVFLIINQILKQYKKGKIIKNNTNEIILE CCHHHHHHHHHCCCCCCCHHCCCCEEEEECCCHHHHHHHHHHHHHCCCEEECCCCEEEEE IDNKLISITNLDINKFHSYQIVNINENKNIYNERNSLILFDLVNYIIEKNQNSIRHINFT ECCEEEEEEECCCHHCCCEEEEEECCCCCCCCCCCCEEHHHHHHHHHHCCCCCEEEEEEE IQMSVVNIYFITYNFNNSYLIDPNKKYVFKIKKDESKGVISTNLLHNYGFVDFVVQSKSQ EEEEEEEEEEEEEECCCCEEECCCCEEEEEEEECCCCCEEEEHHHHHCCEEEEEEECCCH NFLKAYRVQDEILKSVLNLGDNLNNEFLEEIMRKYDTYKIIDRDHKYLVINIE HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCEEEEECCCEEEEEEEC >Mature Secondary Structure MDEQIFIQLLENNLTNSKSYVTQPIILEFKTDVFLIINQILKQYKKGKIIKNNTNEIILE CCHHHHHHHHHCCCCCCCHHCCCCEEEEECCCHHHHHHHHHHHHHCCCEEECCCCEEEEE IDNKLISITNLDINKFHSYQIVNINENKNIYNERNSLILFDLVNYIIEKNQNSIRHINFT ECCEEEEEEECCCHHCCCEEEEEECCCCCCCCCCCCEEHHHHHHHHHHCCCCCEEEEEEE IQMSVVNIYFITYNFNNSYLIDPNKKYVFKIKKDESKGVISTNLLHNYGFVDFVVQSKSQ EEEEEEEEEEEEEECCCCEEECCCCEEEEEEEECCCCCEEEEHHHHHCCEEEEEEECCCH NFLKAYRVQDEILKSVLNLGDNLNNEFLEEIMRKYDTYKIIDRDHKYLVINIE HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCEEEEECCCEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11048724 [H]