| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is 170757736
Identifier: 170757736
GI number: 170757736
Start: 361098
End: 361652
Strand: Direct
Name: 170757736
Synonym: CLD_0468
Alternate gene names: NA
Gene position: 361098-361652 (Clockwise)
Preceding gene: 170755331
Following gene: 170757421
Centisome position: 9.12
GC content: 26.13
Gene sequence:
>555_bases ATGGATGATAAGAATGTAATGTCCTACAGCAAAGAAGAGTTAATACGGAAAATATTAGAAAAAGATAAGGATTTAAAAGG CAGTGATATTGATGAAGAATTATTTCATGAACTTATTAGTGGTAAGATTTCAAAGAATATAAATAATACACATGACAACA ACTTAACATTAGGACAAAGAACTGCTGATAAAATAGCTACATTCGGTGGAAGTTGGACATTTATAATTACTTTTTGTGTA ATATTATCAATTTGGATTATAGGTAATGCTGTTATTCTAATTAATAAAGCGTTTGATCCATATCCTTTTGTATTTTTGAA TTTAATATTATCCTGTCTTGCTGCTATACAAGCGCCAATAATAATGATGTCACAAAATCGTCAATCCGAAAGAGATAGAT TAACCGCTGCAAATGACTACCTTGTTAATTTAAAATCAGAAATTATAATAGAAGATTTGTACAATAAAATTGATATGTTA ATAGATCAACAGGAAGAGTATAAAAAAAATCAAGAAATATTATTAAAAAAAATAGAAGAATTAAAATCTAATTAA
Upstream 100 bases:
>100_bases ATAAAGAAATACTTGTTGTAAGAGAAGAAAGAATTTTAGAATATACAGAGGATTAATGTGAAATATTAAAAAATTAAATA ATGAACAGGGGAGATTATTT
Downstream 100 bases:
>100_bases TTTATAATGACCTTATTCTAAATGATTTTGAAAAGGTTTAAAGATCTTATAGATAGATTTAGAAAAAAATAAAGCCTCCA ATGAAAAATGAAAGTAGGTT
Product: hypothetical protein
Products: NA
Alternate protein names: Transmembrane Protein
Number of amino acids: Translated: 184; Mature: 184
Protein sequence:
>184_residues MDDKNVMSYSKEELIRKILEKDKDLKGSDIDEELFHELISGKISKNINNTHDNNLTLGQRTADKIATFGGSWTFIITFCV ILSIWIIGNAVILINKAFDPYPFVFLNLILSCLAAIQAPIIMMSQNRQSERDRLTAANDYLVNLKSEIIIEDLYNKIDML IDQQEEYKKNQEILLKKIEELKSN
Sequences:
>Translated_184_residues MDDKNVMSYSKEELIRKILEKDKDLKGSDIDEELFHELISGKISKNINNTHDNNLTLGQRTADKIATFGGSWTFIITFCV ILSIWIIGNAVILINKAFDPYPFVFLNLILSCLAAIQAPIIMMSQNRQSERDRLTAANDYLVNLKSEIIIEDLYNKIDML IDQQEEYKKNQEILLKKIEELKSN >Mature_184_residues MDDKNVMSYSKEELIRKILEKDKDLKGSDIDEELFHELISGKISKNINNTHDNNLTLGQRTADKIATFGGSWTFIITFCV ILSIWIIGNAVILINKAFDPYPFVFLNLILSCLAAIQAPIIMMSQNRQSERDRLTAANDYLVNLKSEIIIEDLYNKIDML IDQQEEYKKNQEILLKKIEELKSN
Specific function: Unknown
COG id: COG4420
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21201; Mature: 21201
Theoretical pI: Translated: 4.79; Mature: 4.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDDKNVMSYSKEELIRKILEKDKDLKGSDIDEELFHELISGKISKNINNTHDNNLTLGQR CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHH TADKIATFGGSWTFIITFCVILSIWIIGNAVILINKAFDPYPFVFLNLILSCLAAIQAPI HHHHHHHCCCCHHHHHHHHHHHHHHHHCCHHEEEECCCCCHHHHHHHHHHHHHHHHHHCH IMMSQNRQSERDRLTAANDYLVNLKSEIIIEDLYNKIDMLIDQQEEYKKNQEILLKKIEE HEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH LKSN HHCC >Mature Secondary Structure MDDKNVMSYSKEELIRKILEKDKDLKGSDIDEELFHELISGKISKNINNTHDNNLTLGQR CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHH TADKIATFGGSWTFIITFCVILSIWIIGNAVILINKAFDPYPFVFLNLILSCLAAIQAPI HHHHHHHCCCCHHHHHHHHHHHHHHHHCCHHEEEECCCCCHHHHHHHHHHHHHHHHHHCH IMMSQNRQSERDRLTAANDYLVNLKSEIIIEDLYNKIDMLIDQQEEYKKNQEILLKKIEE HEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH LKSN HHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA