| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is pfkA
Identifier: 170757584
GI number: 170757584
Start: 3677979
End: 3678938
Strand: Reverse
Name: pfkA
Synonym: CLD_1135
Alternate gene names: 170757584
Gene position: 3678938-3677979 (Counterclockwise)
Preceding gene: 170756612
Following gene: 170757030
Centisome position: 92.94
GC content: 32.5
Gene sequence:
>960_bases ATGAGAACTATAGCTGTATTAACAAGTGGTGGAGATGCACCAGGAATGAATGCTGCTATCAGAGCAGTAGTTAGAACAGG TTTAGAAAAAGGTTTAAAAGTAATGGGAATTCAAAGAGGATATAACGGACTTATAAATGGAGAAATATTTGAAATGGATA CTCATAGCGTATCTGATATAATACAAAGAGGCGGAACTATATTAAGAACAGCTCGTTGTGAAGAATTTAGAACAGAGCAG GGAAGAGAAAAAGCTGCTAAAATATTAAAAGCCTTTGGTATTGATGGATTAGTTGTAATTGGTGGAGACGGTTCTTTTCA TGGGGCCCAATTATTATCTAAGTTAGGAATAAATACTGTTGGACTACCAGGTACTATAGATAATGATTTAGCTTATACAG ATTATACAATTGGCTTTGATACATCTATAAATACAGTTTTAGATGCTATAAATAAGCTTAGAGATACATCCACTTCTCAT GAAAGAGTAAGTGTAGTAGAAGTTATGGGAAGAAATTGTGGAGATATAGCATTATATACAGGAGTAGCTGGTGGAGCAGA AAGTATTATAATACCAGAAAAAGAGTATAATGCAGATAAATTATGCAAACAAATACTACAAGGAAAATTAAAAGGGAAAA TGCATAACTTAGTTTTATTAGCAGAAGGTGTTGGAGGAGCTAATGAACTAGCAAAATATATAGAAGAGGTTACAGGGATA GAAACAAGATCTACAATATTAGGACATATACAAAGGGGTGGAAGTCCAACTTGTATGGATAGAATATTAGCTTCAAGAAT GGCTTATAAGGCAGTAGAATTATTGATTAGTGGTAAATCTTCAAGAGTAGTTGGTATAAAAAATGGAAAAATAATTGATA TGGATATAGATGAAGCTTTAGCAGTAGAAAGAAGTTTTGACCAAGAATTATATGACATAGCAACTATTTTATCCAAATAA
Upstream 100 bases:
>100_bases AGTTATGTTATAATTGAAAATATACAAAGCAGAATATAATTAGGTTTATAATATAAGTGGGACTACAAATGTCCCAGTGG TCGTAGGAGGTATTTATCAT
Downstream 100 bases:
>100_bases TGTAAAAGTTTAGATTTTGAGGAGGCGTTTTATATGCAAAAGACTAAAATGATATTTACAATAGGCCCTGCAAGCTCGAC AGAAGAAATTGTATCAAAAT
Product: 6-phosphofructokinase
Products: NA
Alternate protein names: Phosphofructokinase; Phosphohexokinase
Number of amino acids: Translated: 319; Mature: 319
Protein sequence:
>319_residues MRTIAVLTSGGDAPGMNAAIRAVVRTGLEKGLKVMGIQRGYNGLINGEIFEMDTHSVSDIIQRGGTILRTARCEEFRTEQ GREKAAKILKAFGIDGLVVIGGDGSFHGAQLLSKLGINTVGLPGTIDNDLAYTDYTIGFDTSINTVLDAINKLRDTSTSH ERVSVVEVMGRNCGDIALYTGVAGGAESIIIPEKEYNADKLCKQILQGKLKGKMHNLVLLAEGVGGANELAKYIEEVTGI ETRSTILGHIQRGGSPTCMDRILASRMAYKAVELLISGKSSRVVGIKNGKIIDMDIDEALAVERSFDQELYDIATILSK
Sequences:
>Translated_319_residues MRTIAVLTSGGDAPGMNAAIRAVVRTGLEKGLKVMGIQRGYNGLINGEIFEMDTHSVSDIIQRGGTILRTARCEEFRTEQ GREKAAKILKAFGIDGLVVIGGDGSFHGAQLLSKLGINTVGLPGTIDNDLAYTDYTIGFDTSINTVLDAINKLRDTSTSH ERVSVVEVMGRNCGDIALYTGVAGGAESIIIPEKEYNADKLCKQILQGKLKGKMHNLVLLAEGVGGANELAKYIEEVTGI ETRSTILGHIQRGGSPTCMDRILASRMAYKAVELLISGKSSRVVGIKNGKIIDMDIDEALAVERSFDQELYDIATILSK >Mature_319_residues MRTIAVLTSGGDAPGMNAAIRAVVRTGLEKGLKVMGIQRGYNGLINGEIFEMDTHSVSDIIQRGGTILRTARCEEFRTEQ GREKAAKILKAFGIDGLVVIGGDGSFHGAQLLSKLGINTVGLPGTIDNDLAYTDYTIGFDTSINTVLDAINKLRDTSTSH ERVSVVEVMGRNCGDIALYTGVAGGAESIIIPEKEYNADKLCKQILQGKLKGKMHNLVLLAEGVGGANELAKYIEEVTGI ETRSTILGHIQRGGSPTCMDRILASRMAYKAVELLISGKSSRVVGIKNGKIIDMDIDEALAVERSFDQELYDIATILSK
Specific function: Key control step of glycolysis. [C]
COG id: COG0205
COG function: function code G; 6-phosphofructokinase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phosphofructokinase family
Homologues:
Organism=Homo sapiens, GI266453619, Length=356, Percent_Identity=38.7640449438202, Blast_Score=228, Evalue=7e-60, Organism=Homo sapiens, GI266453768, Length=356, Percent_Identity=38.7640449438202, Blast_Score=228, Evalue=8e-60, Organism=Homo sapiens, GI266453748, Length=356, Percent_Identity=38.7640449438202, Blast_Score=228, Evalue=8e-60, Organism=Homo sapiens, GI4505749, Length=356, Percent_Identity=38.7640449438202, Blast_Score=228, Evalue=8e-60, Organism=Homo sapiens, GI11321601, Length=358, Percent_Identity=39.1061452513966, Blast_Score=227, Evalue=1e-59, Organism=Homo sapiens, GI48762920, Length=358, Percent_Identity=37.9888268156425, Blast_Score=221, Evalue=5e-58, Organism=Escherichia coli, GI1790350, Length=318, Percent_Identity=53.7735849056604, Blast_Score=332, Evalue=3e-92, Organism=Caenorhabditis elegans, GI17558788, Length=312, Percent_Identity=39.4230769230769, Blast_Score=212, Evalue=2e-55, Organism=Caenorhabditis elegans, GI25147584, Length=310, Percent_Identity=41.2903225806452, Blast_Score=209, Evalue=2e-54, Organism=Caenorhabditis elegans, GI72003601, Length=339, Percent_Identity=27.1386430678466, Blast_Score=135, Evalue=3e-32, Organism=Saccharomyces cerevisiae, GI6321679, Length=343, Percent_Identity=39.067055393586, Blast_Score=207, Evalue=2e-54, Organism=Saccharomyces cerevisiae, GI6323861, Length=344, Percent_Identity=35.4651162790698, Blast_Score=201, Evalue=1e-52, Organism=Drosophila melanogaster, GI24652337, Length=334, Percent_Identity=41.6167664670659, Blast_Score=226, Evalue=1e-59, Organism=Drosophila melanogaster, GI17647809, Length=334, Percent_Identity=41.6167664670659, Blast_Score=226, Evalue=1e-59, Organism=Drosophila melanogaster, GI28573326, Length=334, Percent_Identity=39.8203592814371, Blast_Score=220, Evalue=1e-57,
Paralogues:
None
Copy number: 3981 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 950 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): K6PF_CLOB1 (A7FYW7)
Other databases:
- EMBL: CP000726 - RefSeq: YP_001385690.1 - ProteinModelPortal: A7FYW7 - SMR: A7FYW7 - STRING: A7FYW7 - GeneID: 5395214 - GenomeReviews: CP000726_GR - KEGG: cba:CLB_3429 - eggNOG: COG0205 - HOGENOM: HBG405044 - OMA: RCEEFKT - ProtClustDB: PRK03202 - BioCyc: CBOT441770:CLB_3429-MONOMER - GO: GO:0006096 - HAMAP: MF_00339 - InterPro: IPR012003 - InterPro: IPR012828 - InterPro: IPR022953 - InterPro: IPR015912 - InterPro: IPR000023 - PIRSF: PIRSF000532 - PRINTS: PR00476 - TIGRFAMs: TIGR02482
Pfam domain/function: PF00365 PFK; SSF53784 Ppfruckinase
EC number: =2.7.1.11
Molecular weight: Translated: 34204; Mature: 34204
Theoretical pI: Translated: 6.37; Mature: 6.37
Prosite motif: PS00433 PHOSPHOFRUCTOKINASE
Important sites: ACT_SITE 127-127 BINDING 162-162 BINDING 243-243 BINDING 249-249 BINDING 252-252
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRTIAVLTSGGDAPGMNAAIRAVVRTGLEKGLKVMGIQRGYNGLINGEIFEMDTHSVSDI CCEEEEEECCCCCCCHHHHHHHHHHHHHHCCHHEEEECCCCCCCCCCEEEECCCHHHHHH IQRGGTILRTARCEEFRTEQGREKAAKILKAFGIDGLVVIGGDGSFHGAQLLSKLGINTV HHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHCCCCC GLPGTIDNDLAYTDYTIGFDTSINTVLDAINKLRDTSTSHERVSVVEVMGRNCGDIALYT CCCCCCCCCCEEEEEEEECCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCEEEEE GVAGGAESIIIPEKEYNADKLCKQILQGKLKGKMHNLVLLAEGVGGANELAKYIEEVTGI CCCCCCCEEEECCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHHCC ETRSTILGHIQRGGSPTCMDRILASRMAYKAVELLISGKSSRVVGIKNGKIIDMDIDEAL CHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCEEEEECCHHHH AVERSFDQELYDIATILSK HHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MRTIAVLTSGGDAPGMNAAIRAVVRTGLEKGLKVMGIQRGYNGLINGEIFEMDTHSVSDI CCEEEEEECCCCCCCHHHHHHHHHHHHHHCCHHEEEECCCCCCCCCCEEEECCCHHHHHH IQRGGTILRTARCEEFRTEQGREKAAKILKAFGIDGLVVIGGDGSFHGAQLLSKLGINTV HHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHCCCCC GLPGTIDNDLAYTDYTIGFDTSINTVLDAINKLRDTSTSHERVSVVEVMGRNCGDIALYT CCCCCCCCCCEEEEEEEECCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCEEEEE GVAGGAESIIIPEKEYNADKLCKQILQGKLKGKMHNLVLLAEGVGGANELAKYIEEVTGI CCCCCCCEEEECCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHHCC ETRSTILGHIQRGGSPTCMDRILASRMAYKAVELLISGKSSRVVGIKNGKIIDMDIDEAL CHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCEEEEECCHHHH AVERSFDQELYDIATILSK HHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA