Definition Clostridium botulinum B1 str. Okra, complete genome.
Accession NC_010516
Length 3,958,233

Click here to switch to the map view.

The map label for this gene is yraL [H]

Identifier: 170757490

GI number: 170757490

Start: 3660718

End: 3660993

Strand: Reverse

Name: yraL [H]

Synonym: CLD_1155

Alternate gene names: 170757490

Gene position: 3660993-3660718 (Counterclockwise)

Preceding gene: 170756669

Following gene: 170755688

Centisome position: 92.49

GC content: 27.54

Gene sequence:

>276_bases
ATGGGCTACAAACAAGCTAACAAAATATTTCCAGTTGATTTATTAAATGAGATACAAAACTATGTTGATGGACAATATGT
TTATATTCCCCGCAAAGACGGTAATCAAAGAATGTGGGGAGAAGTTAATAGAAGCAAGGAAATAATCAGCAAGAGAAATA
TTGAGATTTTTAAAAAATATAACAATGGGATTTCTGTAAAAGAGCTTGCATCAATGTATTATTTATCTCCAAAAACCATA
TATAAAGTTATTAACAAAATAAAATCTAGTTTATAA

Upstream 100 bases:

>100_bases
CATTTTCCCCGGTGTGTTATGCATAGCAAAGGCTATTGCATACAACCGAATGAATGAAATAGCCTTTGCTCGAACCTAAG
AAATTTTAGGAGGGAGCATA

Downstream 100 bases:

>100_bases
TTTTAAGAAAAGCGACATGGGAAACTTCCCTATGTTGCTTTTTTGTGTGCGCTCAACATGATGTAATCTAACGGGTGAAA
GTCTTGAGTACTGTTTGTAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 91; Mature: 90

Protein sequence:

>91_residues
MGYKQANKIFPVDLLNEIQNYVDGQYVYIPRKDGNQRMWGEVNRSKEIISKRNIEIFKKYNNGISVKELASMYYLSPKTI
YKVINKIKSSL

Sequences:

>Translated_91_residues
MGYKQANKIFPVDLLNEIQNYVDGQYVYIPRKDGNQRMWGEVNRSKEIISKRNIEIFKKYNNGISVKELASMYYLSPKTI
YKVINKIKSSL
>Mature_90_residues
GYKQANKIFPVDLLNEIQNYVDGQYVYIPRKDGNQRMWGEVNRSKEIISKRNIEIFKKYNNGISVKELASMYYLSPKTIY
KVINKIKSSL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10726; Mature: 10594

Theoretical pI: Translated: 10.22; Mature: 10.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGYKQANKIFPVDLLNEIQNYVDGQYVYIPRKDGNQRMWGEVNRSKEIISKRNIEIFKKY
CCCCCCCCCCCHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCHHHHHHHHCCHHHHHHC
NNGISVKELASMYYLSPKTIYKVINKIKSSL
CCCCCHHHHHHHHHCCHHHHHHHHHHHHHCC
>Mature Secondary Structure 
GYKQANKIFPVDLLNEIQNYVDGQYVYIPRKDGNQRMWGEVNRSKEIISKRNIEIFKKY
CCCCCCCCCCHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCHHHHHHHHCCHHHHHHC
NNGISVKELASMYYLSPKTIYKVINKIKSSL
CCCCCHHHHHHHHHCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9141695; 9308178; 9384377 [H]