Definition | Clostridium botulinum B1 str. Okra, complete genome. |
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Accession | NC_010516 |
Length | 3,958,233 |
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The map label for this gene is yraL [H]
Identifier: 170757490
GI number: 170757490
Start: 3660718
End: 3660993
Strand: Reverse
Name: yraL [H]
Synonym: CLD_1155
Alternate gene names: 170757490
Gene position: 3660993-3660718 (Counterclockwise)
Preceding gene: 170756669
Following gene: 170755688
Centisome position: 92.49
GC content: 27.54
Gene sequence:
>276_bases ATGGGCTACAAACAAGCTAACAAAATATTTCCAGTTGATTTATTAAATGAGATACAAAACTATGTTGATGGACAATATGT TTATATTCCCCGCAAAGACGGTAATCAAAGAATGTGGGGAGAAGTTAATAGAAGCAAGGAAATAATCAGCAAGAGAAATA TTGAGATTTTTAAAAAATATAACAATGGGATTTCTGTAAAAGAGCTTGCATCAATGTATTATTTATCTCCAAAAACCATA TATAAAGTTATTAACAAAATAAAATCTAGTTTATAA
Upstream 100 bases:
>100_bases CATTTTCCCCGGTGTGTTATGCATAGCAAAGGCTATTGCATACAACCGAATGAATGAAATAGCCTTTGCTCGAACCTAAG AAATTTTAGGAGGGAGCATA
Downstream 100 bases:
>100_bases TTTTAAGAAAAGCGACATGGGAAACTTCCCTATGTTGCTTTTTTGTGTGCGCTCAACATGATGTAATCTAACGGGTGAAA GTCTTGAGTACTGTTTGTAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 91; Mature: 90
Protein sequence:
>91_residues MGYKQANKIFPVDLLNEIQNYVDGQYVYIPRKDGNQRMWGEVNRSKEIISKRNIEIFKKYNNGISVKELASMYYLSPKTI YKVINKIKSSL
Sequences:
>Translated_91_residues MGYKQANKIFPVDLLNEIQNYVDGQYVYIPRKDGNQRMWGEVNRSKEIISKRNIEIFKKYNNGISVKELASMYYLSPKTI YKVINKIKSSL >Mature_90_residues GYKQANKIFPVDLLNEIQNYVDGQYVYIPRKDGNQRMWGEVNRSKEIISKRNIEIFKKYNNGISVKELASMYYLSPKTIY KVINKIKSSL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009057 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10726; Mature: 10594
Theoretical pI: Translated: 10.22; Mature: 10.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGYKQANKIFPVDLLNEIQNYVDGQYVYIPRKDGNQRMWGEVNRSKEIISKRNIEIFKKY CCCCCCCCCCCHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCHHHHHHHHCCHHHHHHC NNGISVKELASMYYLSPKTIYKVINKIKSSL CCCCCHHHHHHHHHCCHHHHHHHHHHHHHCC >Mature Secondary Structure GYKQANKIFPVDLLNEIQNYVDGQYVYIPRKDGNQRMWGEVNRSKEIISKRNIEIFKKY CCCCCCCCCCHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCHHHHHHHHCCHHHHHHC NNGISVKELASMYYLSPKTIYKVINKIKSSL CCCCCHHHHHHHHHCCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9141695; 9308178; 9384377 [H]