Definition | Clostridium botulinum B1 str. Okra, complete genome. |
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Accession | NC_010516 |
Length | 3,958,233 |
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The map label for this gene is 170756669
Identifier: 170756669
GI number: 170756669
Start: 3661599
End: 3661718
Strand: Reverse
Name: 170756669
Synonym: CLD_1154
Alternate gene names: NA
Gene position: 3661718-3661599 (Counterclockwise)
Preceding gene: 170755406
Following gene: 170757490
Centisome position: 92.51
GC content: 33.33
Gene sequence:
>120_bases TTGCCCTGGATTATTCCTGAAAAAGTAGAGTCAAAAATGGCAACTATACTACTTGAAAGACTGCTTAAAGACATTGAAAT GATAATAATGATGACGAATTGTAGTCGTAAGGAGAAATAG
Upstream 100 bases:
>100_bases AGGTCTCTATTTTTACCCGAAGGAGATGCCATGCTTATATAGGATTTTGCGGTGGATACCGTATTCAGCTAAAAGTTATG TCCTAAGAGAGACATTTCTT
Downstream 100 bases:
>100_bases GGCGTCTTGGCATCGTAGAAATGCAGGTTGTAACTAAAAGAATAAGATTGACAGTGGAAAATTAAAATTATTTATAACTT AAGAGGTCATGTCTACACCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 39; Mature: 38
Protein sequence:
>39_residues MPWIIPEKVESKMATILLERLLKDIEMIIMMTNCSRKEK
Sequences:
>Translated_39_residues MPWIIPEKVESKMATILLERLLKDIEMIIMMTNCSRKEK >Mature_38_residues PWIIPEKVESKMATILLERLLKDIEMIIMMTNCSRKEK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 4664; Mature: 4533
Theoretical pI: Translated: 8.53; Mature: 8.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 12.8 %Met (Translated Protein) 15.4 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 10.5 %Met (Mature Protein) 13.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPWIIPEKVESKMATILLERLLKDIEMIIMMTNCSRKEK CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure PWIIPEKVESKMATILLERLLKDIEMIIMMTNCSRKEK CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA