| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is fhuB [H]
Identifier: 170757371
GI number: 170757371
Start: 390764
End: 391792
Strand: Direct
Name: fhuB [H]
Synonym: CLD_0442
Alternate gene names: 170757371
Gene position: 390764-391792 (Clockwise)
Preceding gene: 170757495
Following gene: 170756719
Centisome position: 9.87
GC content: 36.83
Gene sequence:
>1029_bases ATGCAAAAGACCTATAATAAAAAGCGACAATTAGGAGCTTTGAATTTTACAATTTATATGATTGTAGGAGTGGTTTTGCT AGTAATTATATCAGCGGCGTCAATTTCTTTTGGCGCTGCTGATATGAATTTGACTACAGCTTGGGGAGCCATTTTTAATT TTGACTCTTCTTTAACTGAACATCAGATTATTCAAACTCTAAGGCTTCCTCGTATAGCAGCTAATATAATTGTTGGGTCA AGCCTTGCAGTATGTGGTGCTATAATGCAGGGAACTACAAGAAATCCTCTTGCTGATTCTGGACTTATGGGTATAAGTAG CGGTGCTACTTTTGCTATGGCTTTTTGTATGGCATTTTTACCTGGTGGAAGTTACGGACAGATGATGTTTTTTGCCTGCA TTGGTGCAGCCGTTACTACAGGTATGACTTATTTTATTGCATCTATTGGTAGAGGAAGCATGAAACCACAGAGACTTGTT TTAGCAGGTATTTCTATATCAATGCTATTTGGTGCTTTTAGCCAATATCTTTCTATTAAATATAGACTTGGACATGCATT AGCTTATTGGACTGCTGGAGGAACGGCAGGTGCTAAATGGAGTGAACTTGCTATAGTTTTCCCATTTTTTATTGTAGGTA TTATTGTAGCCCTTGTTATATCCCCTTCAATTACGGTTTTAAATCTTGGGGATGATGCAGCTATAGGTCTTGGACTTAAT ACTAAGAAGGTTAAAGGGATATCTACTGTAGTAGTTTTAATACTTACAGGGCTTTCTGTAATTGTTGTTGGACCTGTTGG CTTTGTAGGATTAATAGTACCTCATATTGTACGCTACCTTGTAGGGGTAGATTATAGATACATTATTCCAGCTTCAGGAT TATATGGAGCCTTGATTACTGTGGCAGCAGATTTAGTTGGAAGGCTTATTAATAAGCCCTATGAAACTCCAATTGGAATT ATTTTTGCTTTAATAGGTGTTCCATATTTTCTTTATCTTACAAGGATGCAAAGGAGGGAATTTGAATGA
Upstream 100 bases:
>100_bases ATTATTCTGATATTACAAGTCTTACTGAACAGCTTGACTATATGAGTAATGCAATAAATTCATTAGTTAAATAATTCTAA TATAAGAAAGGAAAATAAAT
Downstream 100 bases:
>100_bases AGAAAAAAGGTTACTCAGTTTCACGTGGTCTAACTATTATTTTGCTACTTACCATTATTTTGTTAGTTGTGGCAGTAATA AGTGTGAACTCAGGTAAAAT
Product: iron compound ABC transporter, permease protein
Products: ADP; phosphate; iron dicitrate [Cytoplasm] [C]
Alternate protein names: Ferric hydroxamate uptake protein B; Ferrichrome transport system permease protein fhuB; Iron(III)-hydroxamate import system permease protein fhuB [H]
Number of amino acids: Translated: 342; Mature: 342
Protein sequence:
>342_residues MQKTYNKKRQLGALNFTIYMIVGVVLLVIISAASISFGAADMNLTTAWGAIFNFDSSLTEHQIIQTLRLPRIAANIIVGS SLAVCGAIMQGTTRNPLADSGLMGISSGATFAMAFCMAFLPGGSYGQMMFFACIGAAVTTGMTYFIASIGRGSMKPQRLV LAGISISMLFGAFSQYLSIKYRLGHALAYWTAGGTAGAKWSELAIVFPFFIVGIIVALVISPSITVLNLGDDAAIGLGLN TKKVKGISTVVVLILTGLSVIVVGPVGFVGLIVPHIVRYLVGVDYRYIIPASGLYGALITVAADLVGRLINKPYETPIGI IFALIGVPYFLYLTRMQRREFE
Sequences:
>Translated_342_residues MQKTYNKKRQLGALNFTIYMIVGVVLLVIISAASISFGAADMNLTTAWGAIFNFDSSLTEHQIIQTLRLPRIAANIIVGS SLAVCGAIMQGTTRNPLADSGLMGISSGATFAMAFCMAFLPGGSYGQMMFFACIGAAVTTGMTYFIASIGRGSMKPQRLV LAGISISMLFGAFSQYLSIKYRLGHALAYWTAGGTAGAKWSELAIVFPFFIVGIIVALVISPSITVLNLGDDAAIGLGLN TKKVKGISTVVVLILTGLSVIVVGPVGFVGLIVPHIVRYLVGVDYRYIIPASGLYGALITVAADLVGRLINKPYETPIGI IFALIGVPYFLYLTRMQRREFE >Mature_342_residues MQKTYNKKRQLGALNFTIYMIVGVVLLVIISAASISFGAADMNLTTAWGAIFNFDSSLTEHQIIQTLRLPRIAANIIVGS SLAVCGAIMQGTTRNPLADSGLMGISSGATFAMAFCMAFLPGGSYGQMMFFACIGAAVTTGMTYFIASIGRGSMKPQRLV LAGISISMLFGAFSQYLSIKYRLGHALAYWTAGGTAGAKWSELAIVFPFFIVGIIVALVISPSITVLNLGDDAAIGLGLN TKKVKGISTVVVLILTGLSVIVVGPVGFVGLIVPHIVRYLVGVDYRYIIPASGLYGALITVAADLVGRLINKPYETPIGI IFALIGVPYFLYLTRMQRREFE
Specific function: Part of the ABC transporter complex fhuBGCD involved in iron(3+)-hydroxamate import. Responsible for the translocation of the substrate across the membrane [H]
COG id: COG0609
COG function: function code P; ABC-type Fe3+-siderophore transport system, permease component
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily [H]
Homologues:
Organism=Escherichia coli, GI1790741, Length=280, Percent_Identity=34.2857142857143, Blast_Score=150, Evalue=2e-37, Organism=Escherichia coli, GI1786347, Length=330, Percent_Identity=33.030303030303, Blast_Score=142, Evalue=3e-35, Organism=Escherichia coli, GI1786805, Length=290, Percent_Identity=33.7931034482759, Blast_Score=142, Evalue=4e-35, Organism=Escherichia coli, GI1790740, Length=323, Percent_Identity=28.7925696594427, Blast_Score=139, Evalue=2e-34, Organism=Escherichia coli, GI1788004, Length=276, Percent_Identity=32.6086956521739, Blast_Score=114, Evalue=6e-27, Organism=Escherichia coli, GI1786804, Length=288, Percent_Identity=29.1666666666667, Blast_Score=109, Evalue=2e-25,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000522 [H]
Pfam domain/function: PF01032 FecCD [H]
EC number: NA
Molecular weight: Translated: 36408; Mature: 36408
Theoretical pI: Translated: 9.96; Mature: 9.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQKTYNKKRQLGALNFTIYMIVGVVLLVIISAASISFGAADMNLTTAWGAIFNFDSSLTE CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCHHH HQIIQTLRLPRIAANIIVGSSLAVCGAIMQGTTRNPLADSGLMGISSGATFAMAFCMAFL HHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHC PGGSYGQMMFFACIGAAVTTGMTYFIASIGRGSMKPQRLVLAGISISMLFGAFSQYLSIK CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHH YRLGHALAYWTAGGTAGAKWSELAIVFPFFIVGIIVALVISPSITVLNLGDDAAIGLGLN HHHHHEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCEEECCCC TKKVKGISTVVVLILTGLSVIVVGPVGFVGLIVPHIVRYLVGVDYRYIIPASGLYGALIT HHHHHHHHHHHHHHHHCCHHEEECHHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHH VAADLVGRLINKPYETPIGIIFALIGVPYFLYLTRMQRREFE HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MQKTYNKKRQLGALNFTIYMIVGVVLLVIISAASISFGAADMNLTTAWGAIFNFDSSLTE CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCHHH HQIIQTLRLPRIAANIIVGSSLAVCGAIMQGTTRNPLADSGLMGISSGATFAMAFCMAFL HHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHC PGGSYGQMMFFACIGAAVTTGMTYFIASIGRGSMKPQRLVLAGISISMLFGAFSQYLSIK CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHH YRLGHALAYWTAGGTAGAKWSELAIVFPFFIVGIIVALVISPSITVLNLGDDAAIGLGLN HHHHHEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCEEECCCC TKKVKGISTVVVLILTGLSVIVVGPVGFVGLIVPHIVRYLVGVDYRYIIPASGLYGALIT HHHHHHHHHHHHHHHHCCHHEEECHHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHH VAADLVGRLINKPYETPIGIIFALIGVPYFLYLTRMQRREFE HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; iron dicitrate [Periplasm]; H2O [C]
Specific reaction: ATP + iron dicitrate [Periplasm] + H2O = ADP + phosphate + iron dicitrate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9639930; 9384377; 8388528 [H]