| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is yqkF [H]
Identifier: 170756892
GI number: 170756892
Start: 3675034
End: 3676044
Strand: Reverse
Name: yqkF [H]
Synonym: CLD_1137
Alternate gene names: 170756892
Gene position: 3676044-3675034 (Counterclockwise)
Preceding gene: 170757030
Following gene: 170755386
Centisome position: 92.87
GC content: 30.66
Gene sequence:
>1011_bases ATGAAGTATAAGGGGTTAGGTAATACTGGGTTAGAAGTTTCTGTTGTAGCTTTTGGAGGTATAGCTATTCAAAAGATAAC TTGTGAAGAAGCAGCTAAGGTTATACACAAAGCAGAAGAACTGGGCATGAATTTTATAGATACTGCAAGGCTTTATACAG TTTCAGAAGAATATATAGGTTATGCATTAGATGGAAGAAGAGATAAATGGATTATAGCTACAAAATCTATGGCTAGAGAT AGAAATTCTATGATAAAAGAAGCAAATACAAGTTTCAAAAATTTAAGAACAGATTATATAGATTTATATCAATTTCACAA TGTGAAAACCTTAGAAGATTACAACAAAATATTAAGTGAAGATGGAGCATATAAAGTATTAGAAGAACTTAAAGAAGAAG GAAAGATAGGTCATATAGGAATTACATCACATAGTGGAGATGTACTCAAAGTAGCTATAGAAAGTGGAAAATTTGAAACT ATTATGTATCCTTATAATATAGTAGAAAGACAAGGGAAAGAATTGTTTAAAAGAGCACAGGAGTTAAACATAGGAGTAAT AGATATGAAACCTATGGCAGGTGGAGCTCTTAATAATGGAACTTTAGCTTTAAGGTATGTACTAAGTAATAAAAATATAA CTACAGCCATACCAGGTATGGCAAATTTAGAAGAAGTAGAGGAAAATTCAGTATGTGGTAATGAAGATATAGTTTTAACA GAGGAAGAGAAAATAGAATGTGATAAAATATTTAATGAGTTAGGAACAAAATTTTGTAGAAGATGTGGATATTGTGCTCC TTGTACAAAAAATATAGATATTCCAGGAATATTTGTATTAGAAGCTTACAAGGTTAGATATGGATTACCAGATTGGGCAG ATGGGAGATATTTCAATTTAGAAGCTAGGGCAAAGGATTGTATAGAATGTGGAGCCTGTGAAAAGAGATGTCCTTATGAT TTACCTATAATAGAAATGTTAAAGAGAGTAAGATTAGAATTTGAAGAATAA
Upstream 100 bases:
>100_bases AAATCAAACTTTCTATTCGGGCTCTTAAATTTTATTTTCTTGACACCAAAGTATTAAGTAACCTATAATTTTCTTTACTA GATATTAAGGAGGAATAACA
Downstream 100 bases:
>100_bases AGTTTATTGTAAAATAAAAATAACATTTTTATAAAATTTTAAAAAAGTATACTATTTTTATTGAAAGTTTTATATAATAT ATTGTATAATAATATGATAT
Product: aldo/keto reductase family oxidoreductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 336; Mature: 336
Protein sequence:
>336_residues MKYKGLGNTGLEVSVVAFGGIAIQKITCEEAAKVIHKAEELGMNFIDTARLYTVSEEYIGYALDGRRDKWIIATKSMARD RNSMIKEANTSFKNLRTDYIDLYQFHNVKTLEDYNKILSEDGAYKVLEELKEEGKIGHIGITSHSGDVLKVAIESGKFET IMYPYNIVERQGKELFKRAQELNIGVIDMKPMAGGALNNGTLALRYVLSNKNITTAIPGMANLEEVEENSVCGNEDIVLT EEEKIECDKIFNELGTKFCRRCGYCAPCTKNIDIPGIFVLEAYKVRYGLPDWADGRYFNLEARAKDCIECGACEKRCPYD LPIIEMLKRVRLEFEE
Sequences:
>Translated_336_residues MKYKGLGNTGLEVSVVAFGGIAIQKITCEEAAKVIHKAEELGMNFIDTARLYTVSEEYIGYALDGRRDKWIIATKSMARD RNSMIKEANTSFKNLRTDYIDLYQFHNVKTLEDYNKILSEDGAYKVLEELKEEGKIGHIGITSHSGDVLKVAIESGKFET IMYPYNIVERQGKELFKRAQELNIGVIDMKPMAGGALNNGTLALRYVLSNKNITTAIPGMANLEEVEENSVCGNEDIVLT EEEKIECDKIFNELGTKFCRRCGYCAPCTKNIDIPGIFVLEAYKVRYGLPDWADGRYFNLEARAKDCIECGACEKRCPYD LPIIEMLKRVRLEFEE >Mature_336_residues MKYKGLGNTGLEVSVVAFGGIAIQKITCEEAAKVIHKAEELGMNFIDTARLYTVSEEYIGYALDGRRDKWIIATKSMARD RNSMIKEANTSFKNLRTDYIDLYQFHNVKTLEDYNKILSEDGAYKVLEELKEEGKIGHIGITSHSGDVLKVAIESGKFET IMYPYNIVERQGKELFKRAQELNIGVIDMKPMAGGALNNGTLALRYVLSNKNITTAIPGMANLEEVEENSVCGNEDIVLT EEEKIECDKIFNELGTKFCRRCGYCAPCTKNIDIPGIFVLEAYKVRYGLPDWADGRYFNLEARAKDCIECGACEKRCPYD LPIIEMLKRVRLEFEE
Specific function: Unknown
COG id: COG0667
COG function: function code C; Predicted oxidoreductases (related to aryl-alcohol dehydrogenases)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the aldo/keto reductase 2 family [H]
Homologues:
Organism=Escherichia coli, GI87081735, Length=226, Percent_Identity=28.7610619469027, Blast_Score=75, Evalue=5e-15, Organism=Drosophila melanogaster, GI24646155, Length=221, Percent_Identity=33.9366515837104, Blast_Score=92, Evalue=5e-19, Organism=Drosophila melanogaster, GI24646159, Length=223, Percent_Identity=33.1838565022422, Blast_Score=88, Evalue=1e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001395 - InterPro: IPR020471 - InterPro: IPR023210 [H]
Pfam domain/function: PF00248 Aldo_ket_red [H]
EC number: 1.-.-.- [C]
Molecular weight: Translated: 37976; Mature: 37976
Theoretical pI: Translated: 5.03; Mature: 5.03
Prosite motif: PS00198 4FE4S_FERREDOXIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.3 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 3.3 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 6.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKYKGLGNTGLEVSVVAFGGIAIQKITCEEAAKVIHKAEELGMNFIDTARLYTVSEEYIG CCCCCCCCCCCEEEEEEECCEEEEEECHHHHHHHHHHHHHHCCCHHCCCEEEEECHHHHC YALDGRRDKWIIATKSMARDRNSMIKEANTSFKNLRTDYIDLYQFHNVKTLEDYNKILSE EEECCCCCEEEEEEHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHCC DGAYKVLEELKEEGKIGHIGITSHSGDVLKVAIESGKFETIMYPYNIVERQGKELFKRAQ CCHHHHHHHHHHCCCEEEEEEECCCCCEEEEEEECCCEEEEECCHHHHHHHHHHHHHHHH ELNIGVIDMKPMAGGALNNGTLALRYVLSNKNITTAIPGMANLEEVEENSVCGNEDIVLT HCCCEEEEECCCCCCCCCCCCEEEEEEEECCCEEEECCCCCCHHHHHHCCCCCCCCEEEE EEEKIECDKIFNELGTKFCRRCGYCAPCTKNIDIPGIFVLEAYKVRYGLPDWADGRYFNL CCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEEHHHCCCCCCCCCCEEEE EARAKDCIECGACEKRCPYDLPIIEMLKRVRLEFEE EHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCC >Mature Secondary Structure MKYKGLGNTGLEVSVVAFGGIAIQKITCEEAAKVIHKAEELGMNFIDTARLYTVSEEYIG CCCCCCCCCCCEEEEEEECCEEEEEECHHHHHHHHHHHHHHCCCHHCCCEEEEECHHHHC YALDGRRDKWIIATKSMARDRNSMIKEANTSFKNLRTDYIDLYQFHNVKTLEDYNKILSE EEECCCCCEEEEEEHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHCC DGAYKVLEELKEEGKIGHIGITSHSGDVLKVAIESGKFETIMYPYNIVERQGKELFKRAQ CCHHHHHHHHHHCCCEEEEEEECCCCCEEEEEEECCCEEEEECCHHHHHHHHHHHHHHHH ELNIGVIDMKPMAGGALNNGTLALRYVLSNKNITTAIPGMANLEEVEENSVCGNEDIVLT HCCCEEEEECCCCCCCCCCCCEEEEEEEECCCEEEECCCCCCHHHHHHCCCCCCCCEEEE EEEKIECDKIFNELGTKFCRRCGYCAPCTKNIDIPGIFVLEAYKVRYGLPDWADGRYFNL CCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEEHHHCCCCCCCCCCEEEE EARAKDCIECGACEKRCPYDLPIIEMLKRVRLEFEE EHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8969508; 9384377 [H]