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The map label for this gene is speD

Identifier: 170756856

GI number: 170756856

Start: 3658494

End: 3658844

Strand: Reverse

Name: speD

Synonym: CLD_1157

Alternate gene names: 170756856

Gene position: 3658844-3658494 (Counterclockwise)

Preceding gene: 170755688

Following gene: 170757365

Centisome position: 92.44

GC content: 29.63

Gene sequence:

>351_bases
TTGAAATATTCAGGGTATCACTTGGTAATCGATTTATTTGGGTGTAATTTTGACCAGTTAGAAAATACAGAATATATTAT
AGAAATGCTTAAAAAATTAGCAAGGGCACTGGATACCAAAATCGTTGCAAAAGCATTTCACAAGTTCCATCCACAAGGGT
TTAGTGGTGCATTAATCATTTCAGAATCACATATAACAATACATACATGGCCGGAAGATGCTTATATAGGAATTGATATA
TTTACATGTTCTAAATGTTTTGATTCTAGAAAAATAGTAGCTTATTTAAAAGAAAACTTAATATTTAAAAAGGTGGAAAT
CAAGGAAATACTGAGAGGTAAAATTGATTGA

Upstream 100 bases:

>100_bases
AAATTGATGCAATACTTGATATGAATTTTTACAAAATTTAAGATATAACTTTAGACCAACACAATTAACAATGGAATTAA
ATTTGGAAGGAGGTTTAATT

Downstream 100 bases:

>100_bases
TATTACCACCTTGGATTTAAAAATGACATAAATTATGTCTAAATAGGTGTACAGTGAAGAGTTCCTTTGAAACATTTAGA
GTATATTGTATAAATAATTA

Product: S-adenosylmethionine decarboxylase

Products: NA

Alternate protein names: AdoMetDC; SAMDC [H]

Number of amino acids: Translated: 116; Mature: 116

Protein sequence:

>116_residues
MKYSGYHLVIDLFGCNFDQLENTEYIIEMLKKLARALDTKIVAKAFHKFHPQGFSGALIISESHITIHTWPEDAYIGIDI
FTCSKCFDSRKIVAYLKENLIFKKVEIKEILRGKID

Sequences:

>Translated_116_residues
MKYSGYHLVIDLFGCNFDQLENTEYIIEMLKKLARALDTKIVAKAFHKFHPQGFSGALIISESHITIHTWPEDAYIGIDI
FTCSKCFDSRKIVAYLKENLIFKKVEIKEILRGKID
>Mature_116_residues
MKYSGYHLVIDLFGCNFDQLENTEYIIEMLKKLARALDTKIVAKAFHKFHPQGFSGALIISESHITIHTWPEDAYIGIDI
FTCSKCFDSRKIVAYLKENLIFKKVEIKEILRGKID

Specific function: Catalyzes the decarboxylation of S-adenosylmethionine to S-adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine [H]

COG id: COG1586

COG function: function code E; S-adenosylmethionine decarboxylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the prokaryotic AdoMetDC family. Type 1 subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003826
- InterPro:   IPR016067
- InterPro:   IPR017716 [H]

Pfam domain/function: PF02675 AdoMet_dc [H]

EC number: =4.1.1.50 [H]

Molecular weight: Translated: 13428; Mature: 13428

Theoretical pI: Translated: 8.08; Mature: 8.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKYSGYHLVIDLFGCNFDQLENTEYIIEMLKKLARALDTKIVAKAFHKFHPQGFSGALII
CCCCCEEEEEEEECCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEE
SESHITIHTWPEDAYIGIDIFTCSKCFDSRKIVAYLKENLIFKKVEIKEILRGKID
ECCEEEEEECCCCCEEEEEEEEEHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MKYSGYHLVIDLFGCNFDQLENTEYIIEMLKKLARALDTKIVAKAFHKFHPQGFSGALII
CCCCCEEEEEEEECCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEE
SESHITIHTWPEDAYIGIDIFTCSKCFDSRKIVAYLKENLIFKKVEIKEILRGKID
ECCEEEEEECCCCCEEEEEEEEEHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA