| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is fldA
Identifier: 170756655
GI number: 170756655
Start: 3559520
End: 3560758
Strand: Reverse
Name: fldA
Synonym: CLD_1231
Alternate gene names: 170756655
Gene position: 3560758-3559520 (Counterclockwise)
Preceding gene: 170756886
Following gene: 170755617
Centisome position: 89.96
GC content: 33.41
Gene sequence:
>1239_bases ATGGAAAACAATACAAATATGTTTAGTGGAGTAAAGGTTATTGAATTAGCAAATTTTATAGCTGCTCCAGCAGCAGGTAG ATTTTTTGCTGATGGCGGTGCAGAGGTAATAAAAATTGAATCACCTGCAGGAGATCCTTTAAGATATACTGCTCCATCAG AAGGAAGACCATTAAGCCAAGAGGAAAATACCACTTATGATTTGGAAAATGCAAATAAAAAGGCAATAGTTTTAAACCTC AAAAGTGAAAAAGGTAAAAAAATATTACATGAAATGTTGAAAGAAGCAGATATATTATTAACTAACTGGAGAACAAAGGC TTTAGTTAAACAAGGATTAGACTATGAAACACTAAAAGAAAAATATCCTAAGCTAGTTTTTGCACAAATAACTGGCTATG GTGAAAAGGGTCCAGATAAGGATCTTCCAGGCTTTGATTATACTGCATTTTTCGCTAGAGGTGGTGTTTCAGGTACTCTT TATGAAAAAGGAACTGTGCCTCCAAATGTTGTTCCAGGACTTGGAGACCATCAAGCTGGTATGTTCTTAGCAGCAGGTAT GGCAGGAGCTTTATATAAAGCAAAAACAACAGGAAAAGGAGATAAGGTAACAGTAAGTTTAATGCATAGCGCTATGTATG GATTAGGTATTATGATACAGGCTGCTCAATATACAGGTCATGGTTTAGTATATCCGATAAATCGTAATGAAACTCCAAAC CCATTTATAGTTTCATATAAATCTAAGGATGATTATTTTGTTCAAGTATGTATGCCACCATATGATGTTTTCTATGATAG ATTTATGACTTCTTTAGGTAGAGAAGATTTAGTTGGAGATGAAAGATACAACAAGATAGAAAATTTAAAAGATGGACGTG CGAAAGAAGTATATAAGATAATTGAAGAACAAATGGTTACAAAGACAAAAGATGAATGGGATAAAATATTTAGAGAAGCG GATATTCCATTTGCTATTGCACAAACTTGGGAAGATTTACTACAAGATGAGCAAGCTTGGGCAAATGATTATTTATACAA GATGAAATATCCAACAGGAAATGAAAGAGCATTAGTAAGACTTCCAGTATTCTTTAAAGAAGCTGGATTACCGGAGTATA AGCAATCACCACAGATAGCAGAAAATACTGCAGAAGTTTTAAAAGAAATGGGATACACAGAAGAAGATATTCAGGAATTA GAAAAAAATAAAGATATTATGGTAAGGAAGGAAAAATAA
Upstream 100 bases:
>100_bases AAAAGAATGCTTTGAAAAGAAGTTTGAATTAAGACAATCTATTTAAATTAATAATAAATATATTAAGTTAACAATAAATC TATTTAAGGAGGCTTTTTTT
Downstream 100 bases:
>100_bases TGACAGATATTTATACTATGGGTGTAGATATAGGTTCAACTGCATCAAAAACAGTAGTATTAAAAAATGGAAAAGAAATT GTAAGTCAGGCAGTAATAAA
Product: E-cinnamoyl-CoA:R-phenyllactate CoA transferase
Products: NA
Alternate protein names: Formyl-CoA transferase [H]
Number of amino acids: Translated: 412; Mature: 412
Protein sequence:
>412_residues MENNTNMFSGVKVIELANFIAAPAAGRFFADGGAEVIKIESPAGDPLRYTAPSEGRPLSQEENTTYDLENANKKAIVLNL KSEKGKKILHEMLKEADILLTNWRTKALVKQGLDYETLKEKYPKLVFAQITGYGEKGPDKDLPGFDYTAFFARGGVSGTL YEKGTVPPNVVPGLGDHQAGMFLAAGMAGALYKAKTTGKGDKVTVSLMHSAMYGLGIMIQAAQYTGHGLVYPINRNETPN PFIVSYKSKDDYFVQVCMPPYDVFYDRFMTSLGREDLVGDERYNKIENLKDGRAKEVYKIIEEQMVTKTKDEWDKIFREA DIPFAIAQTWEDLLQDEQAWANDYLYKMKYPTGNERALVRLPVFFKEAGLPEYKQSPQIAENTAEVLKEMGYTEEDIQEL EKNKDIMVRKEK
Sequences:
>Translated_412_residues MENNTNMFSGVKVIELANFIAAPAAGRFFADGGAEVIKIESPAGDPLRYTAPSEGRPLSQEENTTYDLENANKKAIVLNL KSEKGKKILHEMLKEADILLTNWRTKALVKQGLDYETLKEKYPKLVFAQITGYGEKGPDKDLPGFDYTAFFARGGVSGTL YEKGTVPPNVVPGLGDHQAGMFLAAGMAGALYKAKTTGKGDKVTVSLMHSAMYGLGIMIQAAQYTGHGLVYPINRNETPN PFIVSYKSKDDYFVQVCMPPYDVFYDRFMTSLGREDLVGDERYNKIENLKDGRAKEVYKIIEEQMVTKTKDEWDKIFREA DIPFAIAQTWEDLLQDEQAWANDYLYKMKYPTGNERALVRLPVFFKEAGLPEYKQSPQIAENTAEVLKEMGYTEEDIQEL EKNKDIMVRKEK >Mature_412_residues MENNTNMFSGVKVIELANFIAAPAAGRFFADGGAEVIKIESPAGDPLRYTAPSEGRPLSQEENTTYDLENANKKAIVLNL KSEKGKKILHEMLKEADILLTNWRTKALVKQGLDYETLKEKYPKLVFAQITGYGEKGPDKDLPGFDYTAFFARGGVSGTL YEKGTVPPNVVPGLGDHQAGMFLAAGMAGALYKAKTTGKGDKVTVSLMHSAMYGLGIMIQAAQYTGHGLVYPINRNETPN PFIVSYKSKDDYFVQVCMPPYDVFYDRFMTSLGREDLVGDERYNKIENLKDGRAKEVYKIIEEQMVTKTKDEWDKIFREA DIPFAIAQTWEDLLQDEQAWANDYLYKMKYPTGNERALVRLPVFFKEAGLPEYKQSPQIAENTAEVLKEMGYTEEDIQEL EKNKDIMVRKEK
Specific function: Catalyzes the transfer of the CoA moiety from formyl-CoA to oxalate [H]
COG id: COG1804
COG function: function code C; Predicted acyl-CoA transferases/carnitine dehydratase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CaiB/BaiF CoA-transferase family [H]
Homologues:
Organism=Homo sapiens, GI300863128, Length=416, Percent_Identity=28.6057692307692, Blast_Score=155, Evalue=8e-38, Organism=Homo sapiens, GI300863124, Length=442, Percent_Identity=26.9230769230769, Blast_Score=140, Evalue=2e-33, Organism=Homo sapiens, GI300863126, Length=400, Percent_Identity=27.25, Blast_Score=134, Evalue=2e-31, Organism=Homo sapiens, GI42794625, Length=408, Percent_Identity=25.9803921568627, Blast_Score=130, Evalue=2e-30, Organism=Homo sapiens, GI266456254, Length=402, Percent_Identity=25.8706467661692, Blast_Score=129, Evalue=4e-30, Organism=Homo sapiens, GI13376042, Length=442, Percent_Identity=24.6606334841629, Blast_Score=103, Evalue=2e-22, Organism=Homo sapiens, GI266458393, Length=268, Percent_Identity=25.7462686567164, Blast_Score=92, Evalue=9e-19, Organism=Homo sapiens, GI266458397, Length=250, Percent_Identity=25.6, Blast_Score=90, Evalue=3e-18, Organism=Homo sapiens, GI266458395, Length=148, Percent_Identity=28.3783783783784, Blast_Score=75, Evalue=1e-13, Organism=Homo sapiens, GI42822893, Length=148, Percent_Identity=28.3783783783784, Blast_Score=75, Evalue=1e-13, Organism=Escherichia coli, GI1788717, Length=420, Percent_Identity=25.952380952381, Blast_Score=128, Evalue=7e-31, Organism=Escherichia coli, GI87082093, Length=353, Percent_Identity=28.6118980169972, Blast_Score=126, Evalue=3e-30, Organism=Escherichia coli, GI1786222, Length=405, Percent_Identity=24.9382716049383, Blast_Score=97, Evalue=1e-21, Organism=Caenorhabditis elegans, GI115535051, Length=320, Percent_Identity=25.9375, Blast_Score=82, Evalue=4e-16, Organism=Caenorhabditis elegans, GI32564160, Length=325, Percent_Identity=27.0769230769231, Blast_Score=75, Evalue=9e-14, Organism=Drosophila melanogaster, GI24648431, Length=411, Percent_Identity=27.007299270073, Blast_Score=144, Evalue=1e-34, Organism=Drosophila melanogaster, GI24585488, Length=318, Percent_Identity=25.4716981132075, Blast_Score=97, Evalue=3e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003673 - InterPro: IPR017659 [H]
Pfam domain/function: PF02515 CoA_transf_3 [H]
EC number: =2.8.3.16 [H]
Molecular weight: Translated: 46415; Mature: 46415
Theoretical pI: Translated: 5.07; Mature: 5.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MENNTNMFSGVKVIELANFIAAPAAGRFFADGGAEVIKIESPAGDPLRYTAPSEGRPLSQ CCCCCCHHHHHHHHHHHHHHHCCCCCCEEECCCCEEEEEECCCCCCEEECCCCCCCCCCC EENTTYDLENANKKAIVLNLKSEKGKKILHEMLKEADILLTNWRTKALVKQGLDYETLKE CCCCEEEECCCCCEEEEEEECCCCHHHHHHHHHHHCCEEEECCHHHHHHHCCCCHHHHHH KYPKLVFAQITGYGEKGPDKDLPGFDYTAFFARGGVSGTLYEKGTVPPNVVPGLGDHQAG HCCCEEEEEEECCCCCCCCCCCCCCCHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCC MFLAAGMAGALYKAKTTGKGDKVTVSLMHSAMYGLGIMIQAAQYTGHGLVYPINRNETPN HHHHHHHHHHHEEECCCCCCCEEEHHHHHHHHHHHCEEEEEEEECCCEEEEECCCCCCCC PFIVSYKSKDDYFVQVCMPPYDVFYDRFMTSLGREDLVGDERYNKIENLKDGRAKEVYKI CEEEEEECCCCEEEEEECCHHHHHHHHHHHHCCHHHCCCCHHHHHHHHCCCCHHHHHHHH IEEQMVTKTKDEWDKIFREADIPFAIAQTWEDLLQDEQAWANDYLYKMKYPTGNERALVR HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCEEEE LPVFFKEAGLPEYKQSPQIAENTAEVLKEMGYTEEDIQELEKNKDIMVRKEK ECHHHHHCCCCCHHCCCCHHHHHHHHHHHCCCCHHHHHHHHCCCCEEEEECC >Mature Secondary Structure MENNTNMFSGVKVIELANFIAAPAAGRFFADGGAEVIKIESPAGDPLRYTAPSEGRPLSQ CCCCCCHHHHHHHHHHHHHHHCCCCCCEEECCCCEEEEEECCCCCCEEECCCCCCCCCCC EENTTYDLENANKKAIVLNLKSEKGKKILHEMLKEADILLTNWRTKALVKQGLDYETLKE CCCCEEEECCCCCEEEEEEECCCCHHHHHHHHHHHCCEEEECCHHHHHHHCCCCHHHHHH KYPKLVFAQITGYGEKGPDKDLPGFDYTAFFARGGVSGTLYEKGTVPPNVVPGLGDHQAG HCCCEEEEEEECCCCCCCCCCCCCCCHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCC MFLAAGMAGALYKAKTTGKGDKVTVSLMHSAMYGLGIMIQAAQYTGHGLVYPINRNETPN HHHHHHHHHHHEEECCCCCCCEEEHHHHHHHHHHHCEEEEEEEECCCEEEEECCCCCCCC PFIVSYKSKDDYFVQVCMPPYDVFYDRFMTSLGREDLVGDERYNKIENLKDGRAKEVYKI CEEEEEECCCCEEEEEECCHHHHHHHHHHHHCCHHHCCCCHHHHHHHHCCCCHHHHHHHH IEEQMVTKTKDEWDKIFREADIPFAIAQTWEDLLQDEQAWANDYLYKMKYPTGNERALVR HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCEEEE LPVFFKEAGLPEYKQSPQIAENTAEVLKEMGYTEEDIQELEKNKDIMVRKEK ECHHHHHCCCCCHHCCCCHHHHHHHHHHHCCCCHHHHHHHHCCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12000953 [H]