| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
Click here to switch to the map view.
The map label for this gene is fldI
Identifier: 170755617
GI number: 170755617
Start: 3558726
End: 3559520
Strand: Reverse
Name: fldI
Synonym: CLD_1232
Alternate gene names: 170755617
Gene position: 3559520-3558726 (Counterclockwise)
Preceding gene: 170756655
Following gene: 170757344
Centisome position: 89.93
GC content: 32.96
Gene sequence:
>795_bases ATGACAGATATTTATACTATGGGTGTAGATATAGGTTCAACTGCATCAAAAACAGTAGTATTAAAAAATGGAAAAGAAAT TGTAAGTCAGGCAGTAATAAATGTAGGAGCTGGAACAAGCGGCCCCAAAAGAGCTATAGATTCTGTATTAAGAGAAGCAA AATTATCTATTGAAGATTTAGATTATATTGTATCTACTGGGTATGGAAGAAATAGTTTTGAGTTTGCTAATAAACAAATT TCTGAATTAAGTTGTCATGCAAAGGGAGTCTATTTTGATAACAATAAAGCCAGAACAGTTATTGATATAGGCGGACAAGA TATTAAAGTATTAAAATTAGCGGATAGTGGAAGACTTTTAAATTTCATAATGAATGATAAATGTGCTGCAGGAACGGGAC GATTTTTAGATGTAATGTCTAGAGTAATAGAAATTCCAGTTGATGAGCTAGGAAAAAAAGCATTAGAAAGCGAAAATCCT TGTACTATTAGTTCTACCTGTACAGTATTTGCAGAGTCAGAAGTAATTTCTCAACTTGCAAGAGGAGTTAAAACTGAAGA TTTGATAGCAGGAATTTGTAAATCTGTAGCATCAAGAGTAGCTAGCCTTGCAAAGAGAAATGGTATAGAAGAATTAGTAG TTATGAGTGGAGGAGTAGCTAAAAATATAGGTGTAGTAAAGGCAATGGAAGCAGAATTGGGAAAAGACATTTATATATCT GAAAATTCCCAATTGAATGGAGCATTGGGAGCAAGTCTATACGCTTATGAAAGTTTTCAAAAAGAAAGGAGCTAA
Upstream 100 bases:
>100_bases CAGAAAATACTGCAGAAGTTTTAAAAGAAATGGGATACACAGAAGAAGATATTCAGGAATTAGAAAAAAATAAAGATATT ATGGTAAGGAAGGAAAAATA
Downstream 100 bases:
>100_bases AAACATGAGTGATAGAAATAAGGAAGTAAAAGAAAAAAAAGCAAAGCATTATCTTAGAGAGATTACTGCAAAGCATTATA AAGAGGCTCTCGAAGCAAAA
Product: R-phenyllactate dehydratase activator
Products: NA
Alternate protein names: 2-hydroxyglutaryl-CoA dehydratase component A [H]
Number of amino acids: Translated: 264; Mature: 263
Protein sequence:
>264_residues MTDIYTMGVDIGSTASKTVVLKNGKEIVSQAVINVGAGTSGPKRAIDSVLREAKLSIEDLDYIVSTGYGRNSFEFANKQI SELSCHAKGVYFDNNKARTVIDIGGQDIKVLKLADSGRLLNFIMNDKCAAGTGRFLDVMSRVIEIPVDELGKKALESENP CTISSTCTVFAESEVISQLARGVKTEDLIAGICKSVASRVASLAKRNGIEELVVMSGGVAKNIGVVKAMEAELGKDIYIS ENSQLNGALGASLYAYESFQKERS
Sequences:
>Translated_264_residues MTDIYTMGVDIGSTASKTVVLKNGKEIVSQAVINVGAGTSGPKRAIDSVLREAKLSIEDLDYIVSTGYGRNSFEFANKQI SELSCHAKGVYFDNNKARTVIDIGGQDIKVLKLADSGRLLNFIMNDKCAAGTGRFLDVMSRVIEIPVDELGKKALESENP CTISSTCTVFAESEVISQLARGVKTEDLIAGICKSVASRVASLAKRNGIEELVVMSGGVAKNIGVVKAMEAELGKDIYIS ENSQLNGALGASLYAYESFQKERS >Mature_263_residues TDIYTMGVDIGSTASKTVVLKNGKEIVSQAVINVGAGTSGPKRAIDSVLREAKLSIEDLDYIVSTGYGRNSFEFANKQIS ELSCHAKGVYFDNNKARTVIDIGGQDIKVLKLADSGRLLNFIMNDKCAAGTGRFLDVMSRVIEIPVDELGKKALESENPC TISSTCTVFAESEVISQLARGVKTEDLIAGICKSVASRVASLAKRNGIEELVVMSGGVAKNIGVVKAMEAELGKDIYISE NSQLNGALGASLYAYESFQKERS
Specific function: Required for the activation of (R)-2-hydroxyglutaryl-CoA dehydratase. This protein is extremely sensitive towards oxygen [H]
COG id: COG1924
COG function: function code I; Activator of 2-hydroxyglutaryl-CoA dehydratase (HSP70-class ATPase domain)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: To E.coli yjiL and M.jannaschii MJ0004 and MJ0800 [H]
Homologues:
Organism=Escherichia coli, GI87082426, Length=249, Percent_Identity=39.3574297188755, Blast_Score=181, Evalue=4e-47,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002731 - InterPro: IPR008275 [H]
Pfam domain/function: PF01869 BcrAD_BadFG [H]
EC number: NA
Molecular weight: Translated: 28205; Mature: 28073
Theoretical pI: Translated: 5.49; Mature: 5.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDIYTMGVDIGSTASKTVVLKNGKEIVSQAVINVGAGTSGPKRAIDSVLREAKLSIEDL CCCEEEECCCCCCCCCCEEEEECCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCHHHH DYIVSTGYGRNSFEFANKQISELSCHAKGVYFDNNKARTVIDIGGQDIKVLKLADSGRLL HHHHHCCCCCCHHHHHHHHHHHHHHHCCCEEEECCCCEEEEEECCCCEEEEEEECCCCEE NFIMNDKCAAGTGRFLDVMSRVIEIPVDELGKKALESENPCTISSTCTVFAESEVISQLA HHHHCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHCCCCCEEECCCEEEEEHHHHHHHHH RGVKTEDLIAGICKSVASRVASLAKRNGIEELVVMSGGVAKNIGVVKAMEAELGKDIYIS CCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCHHCCHHHHHHHHHCCCEEEEE ENSQLNGALGASLYAYESFQKERS CCCCCCCHHHHHHHHHHHHHHHCC >Mature Secondary Structure TDIYTMGVDIGSTASKTVVLKNGKEIVSQAVINVGAGTSGPKRAIDSVLREAKLSIEDL CCEEEECCCCCCCCCCEEEEECCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCHHHH DYIVSTGYGRNSFEFANKQISELSCHAKGVYFDNNKARTVIDIGGQDIKVLKLADSGRLL HHHHHCCCCCCHHHHHHHHHHHHHHHCCCEEEECCCCEEEEEECCCCEEEEEEECCCCEE NFIMNDKCAAGTGRFLDVMSRVIEIPVDELGKKALESENPCTISSTCTVFAESEVISQLA HHHHCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHCCCCCEEECCCEEEEEHHHHHHHHH RGVKTEDLIAGICKSVASRVASLAKRNGIEELVVMSGGVAKNIGVVKAMEAELGKDIYIS CCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCHHCCHHHHHHHHHCCCEEEEE ENSQLNGALGASLYAYESFQKERS CCCCCCCHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8365476; 2659350; 7607244; 11106419; 11243821 [H]