Definition Clostridium botulinum B1 str. Okra, complete genome.
Accession NC_010516
Length 3,958,233

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The map label for this gene is 170756601

Identifier: 170756601

GI number: 170756601

Start: 3699592

End: 3700887

Strand: Reverse

Name: 170756601

Synonym: CLD_1120

Alternate gene names: NA

Gene position: 3700887-3699592 (Counterclockwise)

Preceding gene: 170757682

Following gene: 170755543

Centisome position: 93.5

GC content: 27.39

Gene sequence:

>1296_bases
ATGGACATATTACTAATTACATTAAAGGCGGTAGCTTATCTCTTGATAGAGCCTTATTCAGTAATAGTTTTATTATTGTT
ATCATTGATTTTATATAGAAAAAATAGAAAAACTATCATAATGCAAAAAATGATAATAGGCCAAAAGGTAACTACAGCTT
TTGAATTAACAATATCTGAAGTAGTATTAGGAATATTTGCAGGAACTGTGGCTAGTTTAATTATGTCCTATTTAGGAATA
TTTTTTGGTGAAGATTCAGCAATTTATTTAATATTTTTAATATCTATGTTTTTTATGATATTTAATCCCAGATTTATATG
CTTTTCTTATTCTGGAGCTGCATTGGGAATTATTAGTTTAATATTTTTAAATATGGCTAAATTATTAAATATGCCACAAT
TAAATTTTGTTAATATAGATATACCGGCATTAATGTCAATGGTTGCTATATTACACTTAGTTGAGGGTATATTAGTTATG
ATAGATGGAGATAGAGGATATGTTCCTGTTTTTACAAATAGAGATGATAAGATAATAGGAGGATTTGTACTCCAAAGATA
TTGGATACTGCCAATAGCTTTTATGCTTATGCTTAACAACCAAGCTCTTTCAAATACTAGTCAAGGTGGAGTGCCTATGC
CTAATTGGTGGCCTTTACTAAAATCAGGTTTACCATTAAGTGTACTTAATGCAGCGATTATGGGGTTGACATCCTTTTAT
GGAATAATTGGTTATAATGCCGTTACTTTTACCAAAACTAGAAAAGAAAAAAAATTCATATCAGGATTATATATAATAAT
ATATAGTCTAATACTTTTTATGCTTTCAAGATTAGCAGTTATGAATACATTACTTAAAGTAATTGTATTAATTTTTGCTC
CAGTAGGTCACGAGGCTATGTTATATATACAAAAATATTTTGAATTAAAGGGAGAACCTAGATATATAAGCACAGAAGAA
GGCATTATGGTATTAGATGTAGCAAAAGACTCTGTAGCAAATAAAATGGGTATAAAAAGTGGAGATTTATTATTACAGGT
AAATGACAAAGAGATAGATAGTGAGGAAGATATAGTAAAATCTATAGGACAAATGTATGGACATATATCATTTAAGATAA
AAAATGATGTAGGAAGATTAAAAACTGTAAATTATCGAATGTTAACTTCTTACGAAAAGTTAGGTATTGTATTTGTACCT
AAAAATGTACCTAAAAATACATCCGTAATAAAAGTTAAAAGTGAAAAATTTCAAGACATATTAGAAAAAATTAAAAACAA
AGATAAGGATGAATAA

Upstream 100 bases:

>100_bases
AAGATAAGATAATATTGTATTTGATCTTTATATTTTTATATAGATGGTTTAGTTAGACTTTCTAACTAAACCATAGTTAT
GGAGAGGGGAATTTTTTTTA

Downstream 100 bases:

>100_bases
GATGAACCAATTTAAGGTAATTTCAAAATTTAATCCTACAGGAGATCAACCTAAAGCTATAAAATCTATTGCTAAAGGTA
TAGAAAAAAGAGAAAAATTT

Product: hypothetical protein

Products: NA

Alternate protein names: C-Terminal PDZ Domain-Containing Protein; PDZ/DHR/GLGF Domain-Containing Protein; Pological Determinant; Serine Protease; Trypsin-Like Serine Protease; Pdz/Dhr/Glgf Domain Protein; Membrane Spanning Protein

Number of amino acids: Translated: 431; Mature: 431

Protein sequence:

>431_residues
MDILLITLKAVAYLLIEPYSVIVLLLLSLILYRKNRKTIIMQKMIIGQKVTTAFELTISEVVLGIFAGTVASLIMSYLGI
FFGEDSAIYLIFLISMFFMIFNPRFICFSYSGAALGIISLIFLNMAKLLNMPQLNFVNIDIPALMSMVAILHLVEGILVM
IDGDRGYVPVFTNRDDKIIGGFVLQRYWILPIAFMLMLNNQALSNTSQGGVPMPNWWPLLKSGLPLSVLNAAIMGLTSFY
GIIGYNAVTFTKTRKEKKFISGLYIIIYSLILFMLSRLAVMNTLLKVIVLIFAPVGHEAMLYIQKYFELKGEPRYISTEE
GIMVLDVAKDSVANKMGIKSGDLLLQVNDKEIDSEEDIVKSIGQMYGHISFKIKNDVGRLKTVNYRMLTSYEKLGIVFVP
KNVPKNTSVIKVKSEKFQDILEKIKNKDKDE

Sequences:

>Translated_431_residues
MDILLITLKAVAYLLIEPYSVIVLLLLSLILYRKNRKTIIMQKMIIGQKVTTAFELTISEVVLGIFAGTVASLIMSYLGI
FFGEDSAIYLIFLISMFFMIFNPRFICFSYSGAALGIISLIFLNMAKLLNMPQLNFVNIDIPALMSMVAILHLVEGILVM
IDGDRGYVPVFTNRDDKIIGGFVLQRYWILPIAFMLMLNNQALSNTSQGGVPMPNWWPLLKSGLPLSVLNAAIMGLTSFY
GIIGYNAVTFTKTRKEKKFISGLYIIIYSLILFMLSRLAVMNTLLKVIVLIFAPVGHEAMLYIQKYFELKGEPRYISTEE
GIMVLDVAKDSVANKMGIKSGDLLLQVNDKEIDSEEDIVKSIGQMYGHISFKIKNDVGRLKTVNYRMLTSYEKLGIVFVP
KNVPKNTSVIKVKSEKFQDILEKIKNKDKDE
>Mature_431_residues
MDILLITLKAVAYLLIEPYSVIVLLLLSLILYRKNRKTIIMQKMIIGQKVTTAFELTISEVVLGIFAGTVASLIMSYLGI
FFGEDSAIYLIFLISMFFMIFNPRFICFSYSGAALGIISLIFLNMAKLLNMPQLNFVNIDIPALMSMVAILHLVEGILVM
IDGDRGYVPVFTNRDDKIIGGFVLQRYWILPIAFMLMLNNQALSNTSQGGVPMPNWWPLLKSGLPLSVLNAAIMGLTSFY
GIIGYNAVTFTKTRKEKKFISGLYIIIYSLILFMLSRLAVMNTLLKVIVLIFAPVGHEAMLYIQKYFELKGEPRYISTEE
GIMVLDVAKDSVANKMGIKSGDLLLQVNDKEIDSEEDIVKSIGQMYGHISFKIKNDVGRLKTVNYRMLTSYEKLGIVFVP
KNVPKNTSVIKVKSEKFQDILEKIKNKDKDE

Specific function: Unknown

COG id: COG0265

COG function: function code O; Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 48566; Mature: 48566

Theoretical pI: Translated: 9.67; Mature: 9.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
5.1 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
5.1 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDILLITLKAVAYLLIEPYSVIVLLLLSLILYRKNRKTIIMQKMIIGQKVTTAFELTISE
CCEEEEHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCHHHHHHHHHHHHH
VVLGIFAGTVASLIMSYLGIFFGEDSAIYLIFLISMFFMIFNPRFICFSYSGAALGIISL
HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHH
IFLNMAKLLNMPQLNFVNIDIPALMSMVAILHLVEGILVMIDGDRGYVPVFTNRDDKIIG
HHHHHHHHHCCCCCEEEECCHHHHHHHHHHHHHHCCEEEEEECCCCEEEEEECCCCCHHH
GFVLQRYWILPIAFMLMLNNQALSNTSQGGVPMPNWWPLLKSGLPLSVLNAAIMGLTSFY
HHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHH
GIIGYNAVTFTKTRKEKKFISGLYIIIYSLILFMLSRLAVMNTLLKVIVLIFAPVGHEAM
HHHCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
LYIQKYFELKGEPRYISTEEGIMVLDVAKDSVANKMGIKSGDLLLQVNDKEIDSEEDIVK
HHHHHHHHCCCCCCEEECCCCEEEEEECHHHHHHHCCCCCCCEEEEECCCCCCCHHHHHH
SIGQMYGHISFKIKNDVGRLKTVNYRMLTSYEKLGIVFVPKNVPKNTSVIKVKSEKFQDI
HHHHHHCEEEEEEECCCCCEEECCHHHHCCHHHCCEEEECCCCCCCCCEEEECHHHHHHH
LEKIKNKDKDE
HHHHHCCCCCC
>Mature Secondary Structure
MDILLITLKAVAYLLIEPYSVIVLLLLSLILYRKNRKTIIMQKMIIGQKVTTAFELTISE
CCEEEEHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCHHHHHHHHHHHHH
VVLGIFAGTVASLIMSYLGIFFGEDSAIYLIFLISMFFMIFNPRFICFSYSGAALGIISL
HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHH
IFLNMAKLLNMPQLNFVNIDIPALMSMVAILHLVEGILVMIDGDRGYVPVFTNRDDKIIG
HHHHHHHHHCCCCCEEEECCHHHHHHHHHHHHHHCCEEEEEECCCCEEEEEECCCCCHHH
GFVLQRYWILPIAFMLMLNNQALSNTSQGGVPMPNWWPLLKSGLPLSVLNAAIMGLTSFY
HHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHH
GIIGYNAVTFTKTRKEKKFISGLYIIIYSLILFMLSRLAVMNTLLKVIVLIFAPVGHEAM
HHHCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
LYIQKYFELKGEPRYISTEEGIMVLDVAKDSVANKMGIKSGDLLLQVNDKEIDSEEDIVK
HHHHHHHHCCCCCCEEECCCCEEEEEECHHHHHHHCCCCCCCEEEEECCCCCCCHHHHHH
SIGQMYGHISFKIKNDVGRLKTVNYRMLTSYEKLGIVFVPKNVPKNTSVIKVKSEKFQDI
HHHHHHCEEEEEEECCCCCEEECCHHHHCCHHHCCEEEECCCCCCCCCEEEECHHHHHHH
LEKIKNKDKDE
HHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA