Definition | Clostridium botulinum B1 str. Okra, complete genome. |
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Accession | NC_010516 |
Length | 3,958,233 |
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The map label for this gene is 170756101
Identifier: 170756101
GI number: 170756101
Start: 1356155
End: 1356847
Strand: Reverse
Name: 170756101
Synonym: CLD_3347
Alternate gene names: NA
Gene position: 1356847-1356155 (Counterclockwise)
Preceding gene: 170755271
Following gene: 170756557
Centisome position: 34.28
GC content: 23.95
Gene sequence:
>693_bases ATGGAACAACAAGAAAATGTAAATACCAATTTAAACTTAACTTTAAAAGAAAAATTTAAATTTTTCTTTACATCCCCTTC AAAGCTATTTGAGTATTATAGGGAAAATCCTAAATTTGGAATATTACTTTTAATAACAGCTCTTTGTACAGTAATTTATA CATTAATATTTTCTAATGTATCAAAGGAAATTATGAAAAAGTATATGGAAAAACAATTTCAAGGATTAGATCCACAGACA TTAGAAATGACAAAAAAAACTATGGATACTATTAATAATCCTGTCCTAAAAACAGGTTCGACCTTATTATTTGGATTAAT AGGTATATTTTTGATCGCTCTTTTAATATTTATAATTTTTAAAATTTCAAAAGTTGCTCTAAGCTATCAACAAACCGTAA CATTATATTTATTAGCTGGTTTATCCACTTGTATAGGCAGTATGTTTAAAGCTATATATATGCTTATAAGTAAAAAAGCT GTAGGTATTAATGCTATCTTAAATCCTTCTGTAAAAAATACTTTAATGGCTAATATTGATATTTTTAATATATGGTACTA TGTACTTTTAGGTATTGGTATTTATGCTATGGGAAAAACATCTAAGAAAAAAGCTATTATATTAACTATAATATTAGCAA TTTTAAGCATTGGATTTACTGTTTTACCTTTTTTAGTTGGAATAAAAAAATAA
Upstream 100 bases:
>100_bases CTTATTTTTATAAAGATAATTGAATTCCCATAAAGATTTAATAATGCAATTATTTTTCTTTATATATTTAAACAAATTTA TTATATAGGAGGTTTCATTT
Downstream 100 bases:
>100_bases TTAATATTGTATATATTAAAAAGCGTGAAAACTCATCACGCTTTTTATGTTATATTTAATAAGTAATGTTAAAAATAATT TTCATTAGCTTTTTTAAATT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 230; Mature: 230
Protein sequence:
>230_residues MEQQENVNTNLNLTLKEKFKFFFTSPSKLFEYYRENPKFGILLLITALCTVIYTLIFSNVSKEIMKKYMEKQFQGLDPQT LEMTKKTMDTINNPVLKTGSTLLFGLIGIFLIALLIFIIFKISKVALSYQQTVTLYLLAGLSTCIGSMFKAIYMLISKKA VGINAILNPSVKNTLMANIDIFNIWYYVLLGIGIYAMGKTSKKKAIILTIILAILSIGFTVLPFLVGIKK
Sequences:
>Translated_230_residues MEQQENVNTNLNLTLKEKFKFFFTSPSKLFEYYRENPKFGILLLITALCTVIYTLIFSNVSKEIMKKYMEKQFQGLDPQT LEMTKKTMDTINNPVLKTGSTLLFGLIGIFLIALLIFIIFKISKVALSYQQTVTLYLLAGLSTCIGSMFKAIYMLISKKA VGINAILNPSVKNTLMANIDIFNIWYYVLLGIGIYAMGKTSKKKAIILTIILAILSIGFTVLPFLVGIKK >Mature_230_residues MEQQENVNTNLNLTLKEKFKFFFTSPSKLFEYYRENPKFGILLLITALCTVIYTLIFSNVSKEIMKKYMEKQFQGLDPQT LEMTKKTMDTINNPVLKTGSTLLFGLIGIFLIALLIFIIFKISKVALSYQQTVTLYLLAGLSTCIGSMFKAIYMLISKKA VGINAILNPSVKNTLMANIDIFNIWYYVLLGIGIYAMGKTSKKKAIILTIILAILSIGFTVLPFLVGIKK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25948; Mature: 25948
Theoretical pI: Translated: 10.24; Mature: 10.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEQQENVNTNLNLTLKEKFKFFFTSPSKLFEYYRENPKFGILLLITALCTVIYTLIFSNV CCCCCCCCCCEEEEHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH SKEIMKKYMEKQFQGLDPQTLEMTKKTMDTINNPVLKTGSTLLFGLIGIFLIALLIFIIF HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHCCHHHHHHHHHHHHHHHHHHHHH KISKVALSYQQTVTLYLLAGLSTCIGSMFKAIYMLISKKAVGINAILNPSVKNTLMANID HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCHHHHHHHHHH IFNIWYYVLLGIGIYAMGKTSKKKAIILTIILAILSIGFTVLPFLVGIKK HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MEQQENVNTNLNLTLKEKFKFFFTSPSKLFEYYRENPKFGILLLITALCTVIYTLIFSNV CCCCCCCCCCEEEEHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH SKEIMKKYMEKQFQGLDPQTLEMTKKTMDTINNPVLKTGSTLLFGLIGIFLIALLIFIIF HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHCCHHHHHHHHHHHHHHHHHHHHH KISKVALSYQQTVTLYLLAGLSTCIGSMFKAIYMLISKKAVGINAILNPSVKNTLMANID HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCHHHHHHHHHH IFNIWYYVLLGIGIYAMGKTSKKKAIILTIILAILSIGFTVLPFLVGIKK HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA