Definition Clostridium botulinum B1 str. Okra, complete genome.
Accession NC_010516
Length 3,958,233

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The map label for this gene is 170755956

Identifier: 170755956

GI number: 170755956

Start: 1548608

End: 1549099

Strand: Reverse

Name: 170755956

Synonym: CLD_3153

Alternate gene names: NA

Gene position: 1549099-1548608 (Counterclockwise)

Preceding gene: 170756947

Following gene: 170756452

Centisome position: 39.14

GC content: 26.22

Gene sequence:

>492_bases
ATGAAAAAAAATTATAACATGAAAAAAACCATAGCTATGAAAGGCTTTATTTCTGAATTTGGAGAAATTTTTTCTGAAAA
AATGAAAAAAAGATTATTAGAATTAGAAATAAGAACTGTACTCACTCGAAAGGAACATAGAAATAAATTAGATATAAAAC
ATGTAGAACATACAAAATATCCTTGTGAAGATTTAGATAGCAAAAATCTAGAAAAAGAATATACTTATGGTCAATTTGTA
ATTACAGAGGGCAATCTATATTTTAGTGATACTTGTGTAGAAAATGAAAAAGTTATGCAATCACCTATAGTAAATACAAT
ATATAATTCTCTTGATGATGAAGATATGCTTATTGATGAAGATACAACTGCTAAAAAAATAGATGATACCAATATTGATT
ACGTAGTAGATACCTTATTAACAGCCTGTCCTGAAGTCTCCCAAAGATATTTAAAAATTGTGCGCGAAATGTTATCTAAC
GAAAAAAGATAA

Upstream 100 bases:

>100_bases
ATTAAGGTGGTTTTTATATTATATAAAATTTTTATTAAACTTTTATAAAGCTTACCAAATCCTTGCTTAAAAATAGTTTA
GTATAAGGAGAGTAGTTTTA

Downstream 100 bases:

>100_bases
TTTTCATATTTAAAAACAAGAGCATATATTATAACATATATATGTCTTTATATGGATAAAACTTTTAAATAGTTTTTTCT
AATATATGCTCTTTATATAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 163; Mature: 163

Protein sequence:

>163_residues
MKKNYNMKKTIAMKGFISEFGEIFSEKMKKRLLELEIRTVLTRKEHRNKLDIKHVEHTKYPCEDLDSKNLEKEYTYGQFV
ITEGNLYFSDTCVENEKVMQSPIVNTIYNSLDDEDMLIDEDTTAKKIDDTNIDYVVDTLLTACPEVSQRYLKIVREMLSN
EKR

Sequences:

>Translated_163_residues
MKKNYNMKKTIAMKGFISEFGEIFSEKMKKRLLELEIRTVLTRKEHRNKLDIKHVEHTKYPCEDLDSKNLEKEYTYGQFV
ITEGNLYFSDTCVENEKVMQSPIVNTIYNSLDDEDMLIDEDTTAKKIDDTNIDYVVDTLLTACPEVSQRYLKIVREMLSN
EKR
>Mature_163_residues
MKKNYNMKKTIAMKGFISEFGEIFSEKMKKRLLELEIRTVLTRKEHRNKLDIKHVEHTKYPCEDLDSKNLEKEYTYGQFV
ITEGNLYFSDTCVENEKVMQSPIVNTIYNSLDDEDMLIDEDTTAKKIDDTNIDYVVDTLLTACPEVSQRYLKIVREMLSN
EKR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19250; Mature: 19250

Theoretical pI: Translated: 5.16; Mature: 5.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKNYNMKKTIAMKGFISEFGEIFSEKMKKRLLELEIRTVLTRKEHRNKLDIKHVEHTKY
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCC
PCEDLDSKNLEKEYTYGQFVITEGNLYFSDTCVENEKVMQSPIVNTIYNSLDDEDMLIDE
CCCCCCCCCCCCCCCCCEEEEECCCEEECCCHHCHHHHHHHHHHHHHHHCCCCCCEEECC
DTTAKKIDDTNIDYVVDTLLTACPEVSQRYLKIVREMLSNEKR
CCCHHHCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MKKNYNMKKTIAMKGFISEFGEIFSEKMKKRLLELEIRTVLTRKEHRNKLDIKHVEHTKY
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCC
PCEDLDSKNLEKEYTYGQFVITEGNLYFSDTCVENEKVMQSPIVNTIYNSLDDEDMLIDE
CCCCCCCCCCCCCCCCCEEEEECCCEEECCCHHCHHHHHHHHHHHHHHHCCCCCCEEECC
DTTAKKIDDTNIDYVVDTLLTACPEVSQRYLKIVREMLSNEKR
CCCHHHCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA