| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is 170755884
Identifier: 170755884
GI number: 170755884
Start: 964129
End: 964455
Strand: Reverse
Name: 170755884
Synonym: CLD_3717
Alternate gene names: NA
Gene position: 964455-964129 (Counterclockwise)
Preceding gene: 170754802
Following gene: 170755591
Centisome position: 24.37
GC content: 26.3
Gene sequence:
>327_bases ATGGATAAGAAAGATTTAATTTTAGAATGTACCAAAGAAATAGAAGAAAGCATTGATTTTGAATTTTTTAAGACTTTGTT TGATCCAGTTCGATGTGATATTATAAAATACCTGGCCATTAACGGTGCTAACAATATCAAAGATATTTCTCAAAATTTTG CACAGGACCGTTCAGTTATTTCAAGACATTTAGACTTAATGCATAGACAGGGCATAGTCAATAAAACAAAAGAAAATAGA AGTATTTTTTATGAATTGAATGATAAGTATATTCTTGAAAAATTTGAATTAACAGCAACAAATTTAAAAAAATTAATACG TCAGTAA
Upstream 100 bases:
>100_bases CGTAATCAACTGGATTGTATAAATGGTTCATAATAATATCTATAAATTATTATTGACAGATGCATATATGTGCATATATA ATCTTAATTAGGTGATATGT
Downstream 100 bases:
>100_bases AATTTAAAAAGGCAGCCTTGCCTTTTTAAAAACATTATAATATGCATATGTGTGCACTAAAGTATTCATATGTTCACCAA TTTAATTGAGAGGAAGGAAT
Product: ArsR family transcriptional regulator
Products: NA
Alternate protein names: Regulatory Protein ArsR
Number of amino acids: Translated: 108; Mature: 108
Protein sequence:
>108_residues MDKKDLILECTKEIEESIDFEFFKTLFDPVRCDIIKYLAINGANNIKDISQNFAQDRSVISRHLDLMHRQGIVNKTKENR SIFYELNDKYILEKFELTATNLKKLIRQ
Sequences:
>Translated_108_residues MDKKDLILECTKEIEESIDFEFFKTLFDPVRCDIIKYLAINGANNIKDISQNFAQDRSVISRHLDLMHRQGIVNKTKENR SIFYELNDKYILEKFELTATNLKKLIRQ >Mature_108_residues MDKKDLILECTKEIEESIDFEFFKTLFDPVRCDIIKYLAINGANNIKDISQNFAQDRSVISRHLDLMHRQGIVNKTKENR SIFYELNDKYILEKFELTATNLKKLIRQ
Specific function: Unknown
COG id: COG0640
COG function: function code K; Predicted transcriptional regulators
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12829; Mature: 12829
Theoretical pI: Translated: 7.41; Mature: 7.41
Prosite motif: PS50987 HTH_ARSR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDKKDLILECTKEIEESIDFEFFKTLFDPVRCDIIKYLAINGANNIKDISQNFAQDRSVI CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH SRHLDLMHRQGIVNKTKENRSIFYELNDKYILEKFELTATNLKKLIRQ HHHHHHHHHHCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MDKKDLILECTKEIEESIDFEFFKTLFDPVRCDIIKYLAINGANNIKDISQNFAQDRSVI CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH SRHLDLMHRQGIVNKTKENRSIFYELNDKYILEKFELTATNLKKLIRQ HHHHHHHHHHCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA