| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is 170755591
Identifier: 170755591
GI number: 170755591
Start: 963470
End: 964024
Strand: Reverse
Name: 170755591
Synonym: CLD_3718
Alternate gene names: NA
Gene position: 964024-963470 (Counterclockwise)
Preceding gene: 170755884
Following gene: 170755465
Centisome position: 24.35
GC content: 32.07
Gene sequence:
>555_bases ATGAACATACTATCTGTTCTAGCAAGCCCGCGAAATCAAGGCAATACGGCTATTTTATTGAAAGAATATTTAAAAGGTGT AGAGGGCCTAACATCCCAAGTTGAAATAGAAACAATTTATCTTCAAGCAAAAAATATACAATATTGTACAGGCTGCAATG CCTGCAAAAAAAGCAATCAAAGTCAATGTGTATTAAAAGATGATATGCAGGATATTTATAAAAGTGTGGAAAAAGCAGAT GTCTTGATTTTGGCAACCCCTGTCTATGTTTTTAATATGACTGCACAGTTAAAAACTTTTTTAGACAGGCTATATGCAGT AGATCATAATACTTTATTAAACAAAAAAATTGTATTGCTAACCACCTATGGAGATAGCAGTGAAGCTAATTCAGGAGTTA AAAATATCGTACAATCCATCACTATGCTTTCACAATATCTTGGTATGGAGTTCATACAAAATCTTAATGTAAGCACATAT AAGGTTCAGGTTTCTGAAAATGAGCAATCTAAAAAAGCTGCCTATACATTGGGATCAGACATTTTAAAATATTAA
Upstream 100 bases:
>100_bases TAAAAAGGCAGCCTTGCCTTTTTAAAAACATTATAATATGCATATGTGTGCACTAAAGTATTCATATGTTCACCAATTTA ATTGAGAGGAAGGAATAAAT
Downstream 100 bases:
>100_bases TTAAGAGGTGTTTCAAGATGGTAACAATTGTATTTGCACATCCATGGCATGGAAGTTTTAATAAGGCTATACTGGATACA GTAACAACTGTTTTAGAACA
Product: NADPH-dependent FMN reductase
Products: NA
Alternate protein names: AF-1; Af1; Isf-1 [H]
Number of amino acids: Translated: 184; Mature: 184
Protein sequence:
>184_residues MNILSVLASPRNQGNTAILLKEYLKGVEGLTSQVEIETIYLQAKNIQYCTGCNACKKSNQSQCVLKDDMQDIYKSVEKAD VLILATPVYVFNMTAQLKTFLDRLYAVDHNTLLNKKIVLLTTYGDSSEANSGVKNIVQSITMLSQYLGMEFIQNLNVSTY KVQVSENEQSKKAAYTLGSDILKY
Sequences:
>Translated_184_residues MNILSVLASPRNQGNTAILLKEYLKGVEGLTSQVEIETIYLQAKNIQYCTGCNACKKSNQSQCVLKDDMQDIYKSVEKAD VLILATPVYVFNMTAQLKTFLDRLYAVDHNTLLNKKIVLLTTYGDSSEANSGVKNIVQSITMLSQYLGMEFIQNLNVSTY KVQVSENEQSKKAAYTLGSDILKY >Mature_184_residues MNILSVLASPRNQGNTAILLKEYLKGVEGLTSQVEIETIYLQAKNIQYCTGCNACKKSNQSQCVLKDDMQDIYKSVEKAD VLILATPVYVFNMTAQLKTFLDRLYAVDHNTLLNKKIVLLTTYGDSSEANSGVKNIVQSITMLSQYLGMEFIQNLNVSTY KVQVSENEQSKKAAYTLGSDILKY
Specific function: Redox-active protein probably involved in electron transport [H]
COG id: COG0655
COG function: function code R; Multimeric flavodoxin WrbA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ssuE family. Isf subfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005025 [H]
Pfam domain/function: PF03358 FMN_red [H]
EC number: NA
Molecular weight: Translated: 20557; Mature: 20557
Theoretical pI: Translated: 7.89; Mature: 7.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNILSVLASPRNQGNTAILLKEYLKGVEGLTSQVEIETIYLQAKNIQYCTGCNACKKSNQ CCHHHHHCCCCCCCCEEEHHHHHHHHHHCCCCCEEEEEEEEEECCCEEECCCHHHHCCCC SQCVLKDDMQDIYKSVEKADVLILATPVYVFNMTAQLKTFLDRLYAVDHNTLLNKKIVLL CCEEEHHHHHHHHHHHHHCCEEEEECCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEE TTYGDSSEANSGVKNIVQSITMLSQYLGMEFIQNLNVSTYKVQVSENEQSKKAAYTLGSD EECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHH ILKY HHCC >Mature Secondary Structure MNILSVLASPRNQGNTAILLKEYLKGVEGLTSQVEIETIYLQAKNIQYCTGCNACKKSNQ CCHHHHHCCCCCCCCEEEHHHHHHHHHHCCCCCEEEEEEEEEECCCEEECCCHHHHCCCC SQCVLKDDMQDIYKSVEKADVLILATPVYVFNMTAQLKTFLDRLYAVDHNTLLNKKIVLL CCEEEHHHHHHHHHHHHHCCEEEEECCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEE TTYGDSSEANSGVKNIVQSITMLSQYLGMEFIQNLNVSTYKVQVSENEQSKKAAYTLGSD EECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHH ILKY HHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9389475 [H]