Definition Clostridium botulinum B1 str. Okra, complete genome.
Accession NC_010516
Length 3,958,233

Click here to switch to the map view.

The map label for this gene is xpt

Identifier: 170755314

GI number: 170755314

Start: 397373

End: 397945

Strand: Direct

Name: xpt

Synonym: CLD_0436

Alternate gene names: 170755314

Gene position: 397373-397945 (Clockwise)

Preceding gene: 170756350

Following gene: 170755698

Centisome position: 10.04

GC content: 29.67

Gene sequence:

>573_bases
GTGGAAAAATTACAAAATCGTATTTTACAAGAAGGGCATGCATTATCTGAAACTGTATTAAAGGTGGATTCTTTTTTAAA
TCATCAAGTAGATCCAGACTTAATGTATGAAATAGGAACTTATTTTAAAAATTATTTTAAAGAACATAAAATCACAAAGG
TATTTACAATTGAAAGTTCAGGAATTGCTCCAGCTGTTATGACTGCAATGCAAATGAATTTGCCAATGGTAATATTAAAA
AAACAAGCATCAAAAATTTTAAATGGAGATGTTTATCAAACTACTGTACACTCATTTACTAAGGGGTTGGATTATGAATT
AACATTATCTAAAAAATATATTAATAAAGAAGATAATATATTAATTATAGATGATTTTTTAGCCAATGGAGAAGCAGCAT
TAGGAGCTGCACGTTTAGTACAAGGGGCAGGAGCTAAAGTTGCTGGAATGGGCATTGTTATTGAAAAATCATTCCAACCG
GGAAGAAAGATGTTAGAAGAAAAAGGATATGATGTGTATTCACTAGCACGTATAGCAAAACTTGAAAAAGGCTTAATTGA
ATTTGTAAAGTAA

Upstream 100 bases:

>100_bases
ATGATTTTTTCATCAGGAATTTCAACTGGAACAATTGTAGCTTTATTATTAAATGTAATATTAAAAGAAAAAGAATAAGG
AATTTTACGGGGTGATATAA

Downstream 100 bases:

>100_bases
AAGTATTTTAATTATTGAATTCTAAAATAGTACTTATTGGTAATTATGTAAGATTATATTTCAAAATAGATTTAATTTTA
ATATGGCGAAGATAAAAAAC

Product: xanthine phosphoribosyltransferase

Products: NA

Alternate protein names: XPRTase 1 [H]

Number of amino acids: Translated: 190; Mature: 190

Protein sequence:

>190_residues
MEKLQNRILQEGHALSETVLKVDSFLNHQVDPDLMYEIGTYFKNYFKEHKITKVFTIESSGIAPAVMTAMQMNLPMVILK
KQASKILNGDVYQTTVHSFTKGLDYELTLSKKYINKEDNILIIDDFLANGEAALGAARLVQGAGAKVAGMGIVIEKSFQP
GRKMLEEKGYDVYSLARIAKLEKGLIEFVK

Sequences:

>Translated_190_residues
MEKLQNRILQEGHALSETVLKVDSFLNHQVDPDLMYEIGTYFKNYFKEHKITKVFTIESSGIAPAVMTAMQMNLPMVILK
KQASKILNGDVYQTTVHSFTKGLDYELTLSKKYINKEDNILIIDDFLANGEAALGAARLVQGAGAKVAGMGIVIEKSFQP
GRKMLEEKGYDVYSLARIAKLEKGLIEFVK
>Mature_190_residues
MEKLQNRILQEGHALSETVLKVDSFLNHQVDPDLMYEIGTYFKNYFKEHKITKVFTIESSGIAPAVMTAMQMNLPMVILK
KQASKILNGDVYQTTVHSFTKGLDYELTLSKKYINKEDNILIIDDFLANGEAALGAARLVQGAGAKVAGMGIVIEKSFQP
GRKMLEEKGYDVYSLARIAKLEKGLIEFVK

Specific function: Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5'-monophosphate (XMP), so it can be reused for RNA or DNA synthesis [H]

COG id: COG0503

COG function: function code F; Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the purine/pyrimidine phosphoribosyltransferase family. XPT subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000836
- InterPro:   IPR010079 [H]

Pfam domain/function: PF00156 Pribosyltran [H]

EC number: =2.4.2.22 [H]

Molecular weight: Translated: 21265; Mature: 21265

Theoretical pI: Translated: 8.70; Mature: 8.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEKLQNRILQEGHALSETVLKVDSFLNHQVDPDLMYEIGTYFKNYFKEHKITKVFTIESS
CHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEECC
GIAPAVMTAMQMNLPMVILKKQASKILNGDVYQTTVHSFTKGLDYELTLSKKYINKEDNI
CCHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHCCCCEEEEEHHHHCCCCCCE
LIIDDFLANGEAALGAARLVQGAGAKVAGMGIVIEKSFQPGRKMLEEKGYDVYSLARIAK
EEEECCCCCCCHHHHHHHHHHCCCCEEECCEEEEECCCCHHHHHHHHCCCCHHHHHHHHH
LEKGLIEFVK
HHHHHHHHCC
>Mature Secondary Structure
MEKLQNRILQEGHALSETVLKVDSFLNHQVDPDLMYEIGTYFKNYFKEHKITKVFTIESS
CHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEECC
GIAPAVMTAMQMNLPMVILKKQASKILNGDVYQTTVHSFTKGLDYELTLSKKYINKEDNI
CCHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHCCCCEEEEEHHHHCCCCCCE
LIIDDFLANGEAALGAARLVQGAGAKVAGMGIVIEKSFQPGRKMLEEKGYDVYSLARIAK
EEEECCCCCCCHHHHHHHHHHCCCCEEECCEEEEECCCCHHHHHHHHCCCCHHHHHHHHH
LEKGLIEFVK
HHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA