| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is 170755054
Identifier: 170755054
GI number: 170755054
Start: 1572503
End: 1572850
Strand: Reverse
Name: 170755054
Synonym: CLD_3131
Alternate gene names: NA
Gene position: 1572850-1572503 (Counterclockwise)
Preceding gene: 170757648
Following gene: 170755178
Centisome position: 39.74
GC content: 23.28
Gene sequence:
>348_bases ATGAACGTAACAAGTATATCATTGTCTTATTTCTTTTTAGGCATATCTTTGATATCTTTAAGTTTTTTTATTTATTTTAA AATATTAACTAATAATTCATCTAAAGAAGATGAAAACAATGAAAAAATAGTTGGAGACATGAAAGAACCTAAAACTTGGC TGAATAGAAACAATAGAATGGCTTATGTTTCTTTATTTTGGGCTATTGTATCTTTAGCTGTATTTATTTACTTAAAATTT TTTATTATGCCTACTATAATATCAATATTATATGTTATTGGTTATGCTTTTTTAATAGTTATATCAGTTGCAATAGCTGG TATGAGAAAACAGGAAAAAAGTATTTAA
Upstream 100 bases:
>100_bases AATTGTTTGCTTTGGGTATTTTTTCTACATTATTGGTTAAAATAGCAATATGTAATTGATACAAGAAAAATAGATTTTTA TTTATAGGAGGAGCTTTACT
Downstream 100 bases:
>100_bases AACATTCCACCAACTAATTAAAAGTTGGTGGAATATTTAATATACTTTTATTAATTTTTTTTGTCCTTAATTATATCTAT AAAATTTTTTACAATAAGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 115; Mature: 115
Protein sequence:
>115_residues MNVTSISLSYFFLGISLISLSFFIYFKILTNNSSKEDENNEKIVGDMKEPKTWLNRNNRMAYVSLFWAIVSLAVFIYLKF FIMPTIISILYVIGYAFLIVISVAIAGMRKQEKSI
Sequences:
>Translated_115_residues MNVTSISLSYFFLGISLISLSFFIYFKILTNNSSKEDENNEKIVGDMKEPKTWLNRNNRMAYVSLFWAIVSLAVFIYLKF FIMPTIISILYVIGYAFLIVISVAIAGMRKQEKSI >Mature_115_residues MNVTSISLSYFFLGISLISLSFFIYFKILTNNSSKEDENNEKIVGDMKEPKTWLNRNNRMAYVSLFWAIVSLAVFIYLKF FIMPTIISILYVIGYAFLIVISVAIAGMRKQEKSI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13255; Mature: 13255
Theoretical pI: Translated: 9.87; Mature: 9.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNVTSISLSYFFLGISLISLSFFIYFKILTNNSSKEDENNEKIVGDMKEPKTWLNRNNRM CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHCCCCCCHHHHHCCCCCH AYVSLFWAIVSLAVFIYLKFFIMPTIISILYVIGYAFLIVISVAIAGMRKQEKSI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MNVTSISLSYFFLGISLISLSFFIYFKILTNNSSKEDENNEKIVGDMKEPKTWLNRNNRM CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHCCCCCCHHHHHCCCCCH AYVSLFWAIVSLAVFIYLKFFIMPTIISILYVIGYAFLIVISVAIAGMRKQEKSI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA