Definition Clostridium botulinum B1 str. Okra, complete genome.
Accession NC_010516
Length 3,958,233

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The map label for this gene is 170754809

Identifier: 170754809

GI number: 170754809

Start: 1127490

End: 1128068

Strand: Reverse

Name: 170754809

Synonym: CLD_3551

Alternate gene names: NA

Gene position: 1128068-1127490 (Counterclockwise)

Preceding gene: 170754606

Following gene: 170757216

Centisome position: 28.5

GC content: 26.08

Gene sequence:

>579_bases
ATGAAAATTGATTTAACATTAGAAATTAAAAAAGAATTACTTTCTTCAACTCTAAAAAAAGCAATAAATGAAGATAAAGC
ATTTGGTTCTATAGGCCATTTAGGAACTCATTTTGATGTTATGGATAAAGAATTTCCTCTTGATTATATAAAAACAAGAG
GGAAAATATTTAATGTATGCCACATAAGAAATAATGAGATTTCTTTAAATGATATAAACTTAAATGAAATTGAAGAAAAT
GACTTTATTATTTTTTATACTGGATACTTAAAAGAAACAGGCTATGGAACAGGTGAATACTTAAAAGATCATCCTGAGCT
TTCTAGAGAATTAATTGACTATCTAATAAATAAAAAAATTAGCATGATAGGTATAGATACGACTGGAATAAAAAAAAGTT
CTGAACATAGACATATAGATCAGTATTGTGCAGATAGGAATGTGTTTATCATTGAAAATATGAATAATCTTGATCTATTA
TGGGCAGAAGCTAAAAATAATTCTTTCATCATGTATACTTTTCCTCTTAATATAAAAGGTGTAACAGGGCTTACATCTAG
AGTTATAGCTGAACTATAA

Upstream 100 bases:

>100_bases
TTTATTCAATTATATCTAAATAGTTTACAAGGAAACTATTTTGTGATACCATTAAGTAGTTTCCTAGGAAACTAATTTGA
ATTTAATGGAGGTTTTAAAA

Downstream 100 bases:

>100_bases
AAACATATACCGCTTTATAAATAATTTTGTACGAACTAAATATTTTATTTATTCATAATTGGACTAGGTAGCAAACTTAA
CAGCTTGCTACCTAATTAAT

Product: putative cyclase

Products: NA

Alternate protein names: Cyclase; Polyketide Cyclase

Number of amino acids: Translated: 192; Mature: 192

Protein sequence:

>192_residues
MKIDLTLEIKKELLSSTLKKAINEDKAFGSIGHLGTHFDVMDKEFPLDYIKTRGKIFNVCHIRNNEISLNDINLNEIEEN
DFIIFYTGYLKETGYGTGEYLKDHPELSRELIDYLINKKISMIGIDTTGIKKSSEHRHIDQYCADRNVFIIENMNNLDLL
WAEAKNNSFIMYTFPLNIKGVTGLTSRVIAEL

Sequences:

>Translated_192_residues
MKIDLTLEIKKELLSSTLKKAINEDKAFGSIGHLGTHFDVMDKEFPLDYIKTRGKIFNVCHIRNNEISLNDINLNEIEEN
DFIIFYTGYLKETGYGTGEYLKDHPELSRELIDYLINKKISMIGIDTTGIKKSSEHRHIDQYCADRNVFIIENMNNLDLL
WAEAKNNSFIMYTFPLNIKGVTGLTSRVIAEL
>Mature_192_residues
MKIDLTLEIKKELLSSTLKKAINEDKAFGSIGHLGTHFDVMDKEFPLDYIKTRGKIFNVCHIRNNEISLNDINLNEIEEN
DFIIFYTGYLKETGYGTGEYLKDHPELSRELIDYLINKKISMIGIDTTGIKKSSEHRHIDQYCADRNVFIIENMNNLDLL
WAEAKNNSFIMYTFPLNIKGVTGLTSRVIAEL

Specific function: Unknown

COG id: COG1878

COG function: function code R; Predicted metal-dependent hydrolase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22113; Mature: 22113

Theoretical pI: Translated: 5.63; Mature: 5.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIDLTLEIKKELLSSTLKKAINEDKAFGSIGHLGTHFDVMDKEFPLDYIKTRGKIFNVC
CEEEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEECCCCCCCHHHHHCCCCEEEEE
HIRNNEISLNDINLNEIEENDFIIFYTGYLKETGYGTGEYLKDHPELSRELIDYLINKKI
EEECCEEEEEECCCCEECCCCEEEEEEEEEEECCCCCCHHHHCCHHHHHHHHHHHHCCCE
SMIGIDTTGIKKSSEHRHIDQYCADRNVFIIENMNNLDLLWAEAKNNSFIMYTFPLNIKG
EEEEECCCCCCCCCCCHHHHHHHCCCCEEEEECCCCCEEEEEECCCCEEEEEEECEEECC
VTGLTSRVIAEL
CCCHHHHHHHCC
>Mature Secondary Structure
MKIDLTLEIKKELLSSTLKKAINEDKAFGSIGHLGTHFDVMDKEFPLDYIKTRGKIFNVC
CEEEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEECCCCCCCHHHHHCCCCEEEEE
HIRNNEISLNDINLNEIEENDFIIFYTGYLKETGYGTGEYLKDHPELSRELIDYLINKKI
EEECCEEEEEECCCCEECCCCEEEEEEEEEEECCCCCCHHHHCCHHHHHHHHHHHHCCCE
SMIGIDTTGIKKSSEHRHIDQYCADRNVFIIENMNNLDLLWAEAKNNSFIMYTFPLNIKG
EEEEECCCCCCCCCCCHHHHHHHCCCCEEEEECCCCCEEEEEECCCCEEEEEEECEEECC
VTGLTSRVIAEL
CCCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA