| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is glvC [H]
Identifier: 170754659
GI number: 170754659
Start: 355168
End: 356739
Strand: Direct
Name: glvC [H]
Synonym: CLD_0475
Alternate gene names: 170754659
Gene position: 355168-356739 (Clockwise)
Preceding gene: 170757299
Following gene: 170755416
Centisome position: 8.97
GC content: 31.87
Gene sequence:
>1572_bases GTGAAAGATTTAATAGTAGACAAAATGCAGATGTTCGCCAAAGCTATAATTGTTCCCGTATTATTTTTACCTATTGTAGG TGTAATTTTGGCTTTATCTTCTATTTTAAGTAATCCATCTATTGTAGGGGAAAGTGGGCTACTAATGAACATAGGTAAAT TCATTAGTAGTGGACTTTGGCCTATTATGACAAATTTAAGTATTATTTTCTGTGTGGGAATAGCTATGGGGTTAGCAAAA GAAAAGAAAGCAGAAGCGGCACTAGTAGCAGTATTTTCATATTTAGTATATTTGGGGTCTAATAATCAATGGCTTACTCT AACAGGAAAGTTAGTAAAATATAAGGTTCCAGCAGATTTATATGGAACTGGACAGACTCTACAACTAGGATTTCAAGTAA TAGACATGGGAGTTTTTCTAGGAATGATTCTTGGTGTGGTAGTGGCAATTATTCATAATAAATATTGTAATAAGGAATTT CCTGGAGCCTTTGGATTATATGGAAATACTAAATTAGTATTTATAGTTTTAACTCCTATTACATTAATATTAGCAGTAGT GTTTAGTTATATTTGGCCTGTAGTAGCTGCTGGTATTAGCGCTTTAACAGGTTTTATAAATGCAGCTGGAGCTATAGGAG TATTTTTATACGGATTTTTAAATAGATTCTTAATTCCAACTGGATTACATCATTTAATATGGACACCATTTTCTTACTCT AACATTGGAGGAGAATTGATTATAAATGGACAAAAATACTATGGAGCTTACAATATATTCTTAGCACAGCTAACTGATCC GGCTATAAAGGTTTTTGATCCATCAGCAAAATATTTACAGTATGGTATGGTTAAAATGTTTGGATTGGCAGGAGCAGCCT TAGCTTTTTATAAAACATCTAAACCTGAAAACAAAGTTAAATTAAAGTCTATATTGATACCAGCAGTAGCGACATCAATA TTAGTTGGAATCACAGAGCCTCTAGAATTCACATTTTTGTTTGTAGCACCATTTTTATGGGTAGTGCACTCAGTATTGGA TGGTATATTCGAAGCAGTAGTTTCATTATTAGGAGTTAGAACTTTTGCGGCGAATGGATTTATAGATTTTATAGCTTATA ATTTACCAGCAGGAATCGCTAAAACTAAATGGCCTATATTCATAGCTGTTGGATTAGTACAATTAGCAGTGTATTTCTTT GTATTTAAATTCTTAATTAAAAAATTTAATCTTAAAACTCCTGGTAGAGAGGATAAGGAAGTAAAGTTAGTAACTAAAAA AGATTTTAAAGAAAATTTAGCTAAAGCTTCAGGAGAGGTTGCTGCATCCAAAGATTCAGATTTGGCAGGGATAGTAGTTG AAGCCTTAGGTGGTAAAGAAAATATAGAAAGTGTTGATAATTGCTTTACACGTTTAAGGTTAAAACTTAAAAATATAGAC GTAGTTGATGAGACAGCTTTAAAAGGAACTGGAGCAGCTGGTGTAATAAAGAAAGGTAATAATGTTCAAGTAATATATGG ACCAAAAGTAAATGGAATCAGAAATATAGTAGATAAATATCTTGGTAATTAA
Upstream 100 bases:
>100_bases TAATTTTACAATTTTTTCAACTTAAATTCAAGCCTTTATGTAAAAATTATAAGTTATATTTAAACAAAATAAAACTATGT TTAAAAAGGAGATGTTATTA
Downstream 100 bases:
>100_bases TGTTAGAAAAATTCAAAACGAATTACTGTTTAACTTAACTTGTTTTTTTATAAGGCTTTTGTATTTAAATAGATTAAAAA GTTTGCTAAATTATAATCAT
Product: PTS system, glucose/glucoside family, IIBC component
Products: NA
Alternate protein names: Maltose permease IIC component; PTS system maltose-specific EIIC component; Maltose-specific phosphotransferase enzyme IIB component; PTS system maltose-specific EIIB component [H]
Number of amino acids: Translated: 523; Mature: 523
Protein sequence:
>523_residues MKDLIVDKMQMFAKAIIVPVLFLPIVGVILALSSILSNPSIVGESGLLMNIGKFISSGLWPIMTNLSIIFCVGIAMGLAK EKKAEAALVAVFSYLVYLGSNNQWLTLTGKLVKYKVPADLYGTGQTLQLGFQVIDMGVFLGMILGVVVAIIHNKYCNKEF PGAFGLYGNTKLVFIVLTPITLILAVVFSYIWPVVAAGISALTGFINAAGAIGVFLYGFLNRFLIPTGLHHLIWTPFSYS NIGGELIINGQKYYGAYNIFLAQLTDPAIKVFDPSAKYLQYGMVKMFGLAGAALAFYKTSKPENKVKLKSILIPAVATSI LVGITEPLEFTFLFVAPFLWVVHSVLDGIFEAVVSLLGVRTFAANGFIDFIAYNLPAGIAKTKWPIFIAVGLVQLAVYFF VFKFLIKKFNLKTPGREDKEVKLVTKKDFKENLAKASGEVAASKDSDLAGIVVEALGGKENIESVDNCFTRLRLKLKNID VVDETALKGTGAAGVIKKGNNVQVIYGPKVNGIRNIVDKYLGN
Sequences:
>Translated_523_residues MKDLIVDKMQMFAKAIIVPVLFLPIVGVILALSSILSNPSIVGESGLLMNIGKFISSGLWPIMTNLSIIFCVGIAMGLAK EKKAEAALVAVFSYLVYLGSNNQWLTLTGKLVKYKVPADLYGTGQTLQLGFQVIDMGVFLGMILGVVVAIIHNKYCNKEF PGAFGLYGNTKLVFIVLTPITLILAVVFSYIWPVVAAGISALTGFINAAGAIGVFLYGFLNRFLIPTGLHHLIWTPFSYS NIGGELIINGQKYYGAYNIFLAQLTDPAIKVFDPSAKYLQYGMVKMFGLAGAALAFYKTSKPENKVKLKSILIPAVATSI LVGITEPLEFTFLFVAPFLWVVHSVLDGIFEAVVSLLGVRTFAANGFIDFIAYNLPAGIAKTKWPIFIAVGLVQLAVYFF VFKFLIKKFNLKTPGREDKEVKLVTKKDFKENLAKASGEVAASKDSDLAGIVVEALGGKENIESVDNCFTRLRLKLKNID VVDETALKGTGAAGVIKKGNNVQVIYGPKVNGIRNIVDKYLGN >Mature_523_residues MKDLIVDKMQMFAKAIIVPVLFLPIVGVILALSSILSNPSIVGESGLLMNIGKFISSGLWPIMTNLSIIFCVGIAMGLAK EKKAEAALVAVFSYLVYLGSNNQWLTLTGKLVKYKVPADLYGTGQTLQLGFQVIDMGVFLGMILGVVVAIIHNKYCNKEF PGAFGLYGNTKLVFIVLTPITLILAVVFSYIWPVVAAGISALTGFINAAGAIGVFLYGFLNRFLIPTGLHHLIWTPFSYS NIGGELIINGQKYYGAYNIFLAQLTDPAIKVFDPSAKYLQYGMVKMFGLAGAALAFYKTSKPENKVKLKSILIPAVATSI LVGITEPLEFTFLFVAPFLWVVHSVLDGIFEAVVSLLGVRTFAANGFIDFIAYNLPAGIAKTKWPIFIAVGLVQLAVYFF VFKFLIKKFNLKTPGREDKEVKLVTKKDFKENLAKASGEVAASKDSDLAGIVVEALGGKENIESVDNCFTRLRLKLKNID VVDETALKGTGAAGVIKKGNNVQVIYGPKVNGIRNIVDKYLGN
Specific function: The phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. This
COG id: COG1263
COG function: function code G; Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PTS EIIC type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1787908, Length=519, Percent_Identity=36.0308285163777, Blast_Score=302, Evalue=4e-83, Organism=Escherichia coli, GI1787343, Length=522, Percent_Identity=32.9501915708812, Blast_Score=254, Evalue=7e-69, Organism=Escherichia coli, GI1786894, Length=517, Percent_Identity=33.4622823984526, Blast_Score=220, Evalue=2e-58,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018113 - InterPro: IPR004719 - InterPro: IPR001996 - InterPro: IPR003352 - InterPro: IPR013013 - InterPro: IPR011535 - InterPro: IPR010975 [H]
Pfam domain/function: PF00367 PTS_EIIB; PF02378 PTS_EIIC [H]
EC number: =2.7.1.69 [H]
Molecular weight: Translated: 56746; Mature: 56746
Theoretical pI: Translated: 9.90; Mature: 9.90
Prosite motif: PS01035 PTS_EIIB_TYPE_1_CYS ; PS51098 PTS_EIIB_TYPE_1 ; PS51103 PTS_EIIC_TYPE_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKDLIVDKMQMFAKAIIVPVLFLPIVGVILALSSILSNPSIVGESGLLMNIGKFISSGLW CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCH PIMTNLSIIFCVGIAMGLAKEKKAEAALVAVFSYLVYLGSNNQWLTLTGKLVKYKVPADL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEEEECCCCC YGTGQTLQLGFQVIDMGVFLGMILGVVVAIIHNKYCNKEFPGAFGLYGNTKLVFIVLTPI CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCCCEEEEEEHHHH TLILAVVFSYIWPVVAAGISALTGFINAAGAIGVFLYGFLNRFLIPTGLHHLIWTPFSYS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCC NIGGELIINGQKYYGAYNIFLAQLTDPAIKVFDPSAKYLQYGMVKMFGLAGAALAFYKTS CCCCEEEECCHHHHCHHEEEEEECCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCC KPENKVKLKSILIPAVATSILVGITEPLEFTFLFVAPFLWVVHSVLDGIFEAVVSLLGVR CCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TFAANGFIDFIAYNLPAGIAKTKWPIFIAVGLVQLAVYFFVFKFLIKKFNLKTPGREDKE HHHCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCE VKLVTKKDFKENLAKASGEVAASKDSDLAGIVVEALGGKENIESVDNCFTRLRLKLKNID EEEEEHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCC VVDETALKGTGAAGVIKKGNNVQVIYGPKVNGIRNIVDKYLGN EEHHHHCCCCCCCCEEECCCCEEEEECCCCCHHHHHHHHHHCC >Mature Secondary Structure MKDLIVDKMQMFAKAIIVPVLFLPIVGVILALSSILSNPSIVGESGLLMNIGKFISSGLW CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCH PIMTNLSIIFCVGIAMGLAKEKKAEAALVAVFSYLVYLGSNNQWLTLTGKLVKYKVPADL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEEEECCCCC YGTGQTLQLGFQVIDMGVFLGMILGVVVAIIHNKYCNKEFPGAFGLYGNTKLVFIVLTPI CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCCCEEEEEEHHHH TLILAVVFSYIWPVVAAGISALTGFINAAGAIGVFLYGFLNRFLIPTGLHHLIWTPFSYS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCC NIGGELIINGQKYYGAYNIFLAQLTDPAIKVFDPSAKYLQYGMVKMFGLAGAALAFYKTS CCCCEEEECCHHHHCHHEEEEEECCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCC KPENKVKLKSILIPAVATSILVGITEPLEFTFLFVAPFLWVVHSVLDGIFEAVVSLLGVR CCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TFAANGFIDFIAYNLPAGIAKTKWPIFIAVGLVQLAVYFFVFKFLIKKFNLKTPGREDKE HHHCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCE VKLVTKKDFKENLAKASGEVAASKDSDLAGIVVEALGGKENIESVDNCFTRLRLKLKNID EEEEEHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCC VVDETALKGTGAAGVIKKGNNVQVIYGPKVNGIRNIVDKYLGN EEHHHHCCCCCCCCEEECCCCEEEEECCCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8704981; 9384377; 11489864 [H]