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The map label for this gene is etfB [H]

Identifier: 170754647

GI number: 170754647

Start: 3554265

End: 3555059

Strand: Reverse

Name: etfB [H]

Synonym: CLD_1236

Alternate gene names: 170754647

Gene position: 3555059-3554265 (Counterclockwise)

Preceding gene: 170757106

Following gene: 170755508

Centisome position: 89.81

GC content: 34.21

Gene sequence:

>795_bases
TTGAAGATAGTTGTATGTGTAAAACAAGTACCAGATACTAATGAAGTAAAGATCGATCCTGTAAAAGGAACTCTTATCCG
TGAAGGTGTACCTGCTATATTAAATCCGGATGATGCTAATGCACTAGAAGAAGCTTTAAAATTAAAAGATAAATACGAAG
ATGTAAAGGTTACTGTGATTACTATGGGTATACCATCTTCTTCATATATGTTAAGAGAATGTTTAGCAATGGGAGCAGAT
GAAGCTGTATTAGTAACAGATAGAGCTTTTGCTGGAGCAGATACTTGGGCAACATCTAATGCGTTAGCTTCAGCTCTAAG
AAAAGTTGGCGATTATGATTTAATATTCGCTGGTAGACAAGCTATAGATGGAGATACAGCTCAAGTTGGACCTCAAATTG
CAGAGAGACTTGATATACCACAAGTGACTTATGCTATGGGCTTTGAGTACAATAAGGAAGATAAAACAATGATTGTAGAT
AGACAATTAGAAGATGGTTATGAGAGAGTACAAGTTAAGTCTATGCCAGCATTAATTACTGCTATTAGTGAATTAAACCA
ACCTCGCTATATGACAGTTGGAGGTATAGTAGACGCATATAAGAAAGATATTAAGATATTTACAATTAAAGATTTAGATG
TTACTCCAGATGAAGTAGGTTTAAATGCTTCTCCAACTTCAGTATTTAGATCCTTCGCGCCAGATAAAAAATCACAAGGT
GTTATATTAGAAGGAACAGCTAAAGAAAAGGTAGAAAAATTAGTATCAGCACTTCAATCTAAACACTATATTTAA

Upstream 100 bases:

>100_bases
ATTATATAGAGATGTTAGAGTAATTGCTATATATGAAGGAACTTCTGAAGTTCAACAAATGGTAATCGCATCAAATCTTT
TAAAGTAAGGAGTGGAGAAA

Downstream 100 bases:

>100_bases
GTTTTGGGAGGTTTATTATGGCTATCAAAATTATTAAAGAAAAATGTAAAGCATGTGGTATATGTGAAAAGCAATGCCCA
TTTGATGCTATTCATGTAGT

Product: electron transfer flavoprotein, beta subunit/FixA family protein

Products: NA

Alternate protein names: Beta-ETF; Electron transfer flavoprotein small subunit; ETFSS [H]

Number of amino acids: Translated: 264; Mature: 264

Protein sequence:

>264_residues
MKIVVCVKQVPDTNEVKIDPVKGTLIREGVPAILNPDDANALEEALKLKDKYEDVKVTVITMGIPSSSYMLRECLAMGAD
EAVLVTDRAFAGADTWATSNALASALRKVGDYDLIFAGRQAIDGDTAQVGPQIAERLDIPQVTYAMGFEYNKEDKTMIVD
RQLEDGYERVQVKSMPALITAISELNQPRYMTVGGIVDAYKKDIKIFTIKDLDVTPDEVGLNASPTSVFRSFAPDKKSQG
VILEGTAKEKVEKLVSALQSKHYI

Sequences:

>Translated_264_residues
MKIVVCVKQVPDTNEVKIDPVKGTLIREGVPAILNPDDANALEEALKLKDKYEDVKVTVITMGIPSSSYMLRECLAMGAD
EAVLVTDRAFAGADTWATSNALASALRKVGDYDLIFAGRQAIDGDTAQVGPQIAERLDIPQVTYAMGFEYNKEDKTMIVD
RQLEDGYERVQVKSMPALITAISELNQPRYMTVGGIVDAYKKDIKIFTIKDLDVTPDEVGLNASPTSVFRSFAPDKKSQG
VILEGTAKEKVEKLVSALQSKHYI
>Mature_264_residues
MKIVVCVKQVPDTNEVKIDPVKGTLIREGVPAILNPDDANALEEALKLKDKYEDVKVTVITMGIPSSSYMLRECLAMGAD
EAVLVTDRAFAGADTWATSNALASALRKVGDYDLIFAGRQAIDGDTAQVGPQIAERLDIPQVTYAMGFEYNKEDKTMIVD
RQLEDGYERVQVKSMPALITAISELNQPRYMTVGGIVDAYKKDIKIFTIKDLDVTPDEVGLNASPTSVFRSFAPDKKSQG
VILEGTAKEKVEKLVSALQSKHYI

Specific function: The electron transfer flavoprotein serves as a specific electron acceptor for other dehydrogenases. It transfers the electrons to the main respiratory chain via ETF-ubiquinone oxidoreductase (ETF dehydrogenase) [H]

COG id: COG2086

COG function: function code C; Electron transfer flavoprotein, beta subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ETF beta-subunit/fixA family [H]

Homologues:

Organism=Homo sapiens, GI4503609, Length=264, Percent_Identity=31.8181818181818, Blast_Score=101, Evalue=7e-22,
Organism=Homo sapiens, GI62420877, Length=250, Percent_Identity=31.6, Blast_Score=97, Evalue=2e-20,
Organism=Escherichia coli, GI87081682, Length=263, Percent_Identity=28.8973384030418, Blast_Score=89, Evalue=3e-19,
Organism=Escherichia coli, GI2367123, Length=261, Percent_Identity=25.6704980842912, Blast_Score=86, Evalue=2e-18,
Organism=Caenorhabditis elegans, GI25141345, Length=221, Percent_Identity=38.4615384615385, Blast_Score=126, Evalue=9e-30,
Organism=Saccharomyces cerevisiae, GI6321646, Length=261, Percent_Identity=31.8007662835249, Blast_Score=94, Evalue=2e-20,
Organism=Drosophila melanogaster, GI24651147, Length=217, Percent_Identity=36.8663594470046, Blast_Score=95, Evalue=4e-20,
Organism=Drosophila melanogaster, GI24651145, Length=217, Percent_Identity=36.8663594470046, Blast_Score=95, Evalue=4e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000049
- InterPro:   IPR014730
- InterPro:   IPR012255
- InterPro:   IPR014729 [H]

Pfam domain/function: PF01012 ETF [H]

EC number: NA

Molecular weight: Translated: 28920; Mature: 28920

Theoretical pI: Translated: 4.67; Mature: 4.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIVVCVKQVPDTNEVKIDPVKGTLIREGVPAILNPDDANALEEALKLKDKYEDVKVTVI
CEEEEEEECCCCCCCEEEECCCCCHHHCCCCCEECCCCHHHHHHHHHHHHCCCCEEEEEE
TMGIPSSSYMLRECLAMGADEAVLVTDRAFAGADTWATSNALASALRKVGDYDLIFAGRQ
EEECCCCHHHHHHHHHCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHCCEEEEEECCC
AIDGDTAQVGPQIAERLDIPQVTYAMGFEYNKEDKTMIVDRQLEDGYERVQVKSMPALIT
CCCCCHHHCCHHHHHHCCCCCEEHHHCCEECCCCCEEEEECHHHHHHHHHHHHHHHHHHH
AISELNQPRYMTVGGIVDAYKKDIKIFTIKDLDVTPDEVGLNASPTSVFRSFAPDKKSQG
HHHHCCCCCEEEEHHHHHHHHCCEEEEEEECCCCCHHHCCCCCCHHHHHHHCCCCCCCCC
VILEGTAKEKVEKLVSALQSKHYI
EEEECCHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MKIVVCVKQVPDTNEVKIDPVKGTLIREGVPAILNPDDANALEEALKLKDKYEDVKVTVI
CEEEEEEECCCCCCCEEEECCCCCHHHCCCCCEECCCCHHHHHHHHHHHHCCCCEEEEEE
TMGIPSSSYMLRECLAMGADEAVLVTDRAFAGADTWATSNALASALRKVGDYDLIFAGRQ
EEECCCCHHHHHHHHHCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHCCEEEEEECCC
AIDGDTAQVGPQIAERLDIPQVTYAMGFEYNKEDKTMIVDRQLEDGYERVQVKSMPALIT
CCCCCHHHCCHHHHHHCCCCCEEHHHCCEECCCCCEEEEECHHHHHHHHHHHHHHHHHHH
AISELNQPRYMTVGGIVDAYKKDIKIFTIKDLDVTPDEVGLNASPTSVFRSFAPDKKSQG
HHHHCCCCCEEEEHHHHHHHHCCEEEEEEECCCCCHHHCCCCCCHHHHHHHCCCCCCCCC
VILEGTAKEKVEKLVSALQSKHYI
EEEECCHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA